Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:00:35 (20644): wrapper (7.7.26015): starting
19:00:35 (20644): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 19:00:35] Arguments: --nthreads 8
[2026-01-10 19:00:35] Threads: 8
[2026-01-10 19:00:35] Checking for CVMFS
[2026-01-10 19:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:00:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:00:39] 2.11.2.0 32220 37188 123992 154987 3 63 18454650 25165825 899 130560 0 16060264 99.813 9784808 3823 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 19:00:39] CVMFS is ok
[2026-01-10 19:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:00:39] Checking for apptainer binary...
[2026-01-10 19:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:00:39] Running /usr/bin/apptainer --version
[2026-01-10 19:00:39] apptainer version 1.3.2-1.el7
[2026-01-10 19:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:00:48] cg-vwn447.simple-grid.lan
[2026-01-10 19:00:48] apptainer works
[2026-01-10 19:00:48] Set ATHENA_PROC_NUMBER=8
[2026-01-10 19:00:48] Set ATHENA_CORE_NUMBER=8
[2026-01-10 19:00:48] Starting ATLAS job with PandaID=6965383433
[2026-01-10 19:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:04:46]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:04:46] 2026-01-11 00:03:36,131 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 01:04:46] 2026-01-11 00:03:36,132 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 01:04:46] 2026-01-11 00:03:36,134 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6965383433/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,135 | INFO     | extracted standard info from prmon json
[2026-01-11 01:04:46] 2026-01-11 00:03:36,135 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:04:46] 2026-01-11 00:03:36,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:04:46] 2026-01-11 00:03:36,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:04:46] 2026-01-11 00:03:36,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:04:46] 2026-01-11 00:03:36,143 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:04:46] 2026-01-11 00:03:36,144 | INFO     | sum of square deviations: 12403750705.5
[2026-01-11 01:04:46] 2026-01-11 00:03:36,148 | INFO     | sum of deviations: 98474874840.50005
[2026-01-11 01:04:46] 2026-01-11 00:03:36,148 | INFO     | mean x: 1768079258.5
[2026-01-11 01:04:46] 2026-01-11 00:03:36,149 | INFO     | mean y: 2472038.611111111
[2026-01-11 01:04:46] 2026-01-11 00:03:36,149 | INFO     | intersect: -14034522723.922142
[2026-01-11 01:04:46] 2026-01-11 00:03:36,149 | INFO     | chi2: 7.500674940399043
[2026-01-11 01:04:46] 2026-01-11 00:03:36,150 | INFO     | sum of square deviations: 11867638328.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,154 | INFO     | sum of deviations: 119609580068.00002
[2026-01-11 01:04:46] 2026-01-11 00:03:36,154 | INFO     | mean x: 1768079106.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,154 | INFO     | mean y: 2477973.5608308604
[2026-01-11 01:04:46] 2026-01-11 00:03:36,155 | INFO     | intersect: -17817343759.353786
[2026-01-11 01:04:46] 2026-01-11 00:03:36,155 | INFO     | chi2: 6.77509070930042
[2026-01-11 01:04:46] 2026-01-11 00:03:36,155 | INFO     | current chi2=6.77509070930042 (change=9.673585868794117 %)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,155 | INFO     | right removable region: 336
[2026-01-11 01:04:46] 2026-01-11 00:03:36,156 | INFO     | sum of square deviations: 11867638328.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,160 | INFO     | sum of deviations: -21225505038.999992
[2026-01-11 01:04:46] 2026-01-11 00:03:36,160 | INFO     | mean x: 1768079411.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,160 | INFO     | mean y: 2506069.703264095
[2026-01-11 01:04:46] 2026-01-11 00:03:36,160 | INFO     | intersect: 3164750941.8771815
[2026-01-11 01:04:46] 2026-01-11 00:03:36,161 | INFO     | chi2: 2.7681781248943285
[2026-01-11 01:04:46] 2026-01-11 00:03:36,161 | INFO     | current chi2=2.7681781248943285 (change=63.09427955630005 %)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,162 | INFO     | sum of square deviations: 11347200663.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,165 | INFO     | sum of deviations: -88562609202.50002
[2026-01-11 01:04:46] 2026-01-11 00:03:36,166 | INFO     | mean x: 1768079563.5
[2026-01-11 01:04:46] 2026-01-11 00:03:36,166 | INFO     | mean y: 2525736.4608433736
[2026-01-11 01:04:46] 2026-01-11 00:03:36,166 | INFO     | intersect: 13802029602.798464
[2026-01-11 01:04:46] 2026-01-11 00:03:36,166 | INFO     | chi2: 1.0932792050941604
[2026-01-11 01:04:46] 2026-01-11 00:03:36,167 | INFO     | current chi2=1.0932792050941604 (change=60.505460423147625 %)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,167 | INFO     | sum of square deviations: 10842205148.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,171 | INFO     | sum of deviations: -93765740994.99997
[2026-01-11 01:04:46] 2026-01-11 00:03:36,171 | INFO     | mean x: 1768079716.0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,171 | INFO     | mean y: 2527292.3333333335
[2026-01-11 01:04:46] 2026-01-11 00:03:36,171 | INFO     | intersect: 15293264042.463041
[2026-01-11 01:04:46] 2026-01-11 00:03:36,172 | INFO     | chi2: 1.0574775369886071
[2026-01-11 01:04:46] 2026-01-11 00:03:36,172 | INFO     | current chi2=1.0574775369886071 (change=3.274704937104316 %)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,172 | INFO     | left removable region: 30
[2026-01-11 01:04:46] 2026-01-11 00:03:36,173 | INFO     | sum of square deviations: 8884603792.5
[2026-01-11 01:04:46] 2026-01-11 00:03:36,176 | INFO     | sum of deviations: -41524657794.99999
[2026-01-11 01:04:46] 2026-01-11 00:03:36,176 | INFO     | mean x: 1768079990.5
[2026-01-11 01:04:46] 2026-01-11 00:03:36,176 | INFO     | mean y: 2524673.993464052
[2026-01-11 01:04:46] 2026-01-11 00:03:36,177 | INFO     | intersect: 8266136453.921843
[2026-01-11 01:04:46] 2026-01-11 00:03:36,177 | INFO     | chi2: 0.2210441365933736
[2026-01-11 01:04:46] 2026-01-11 00:03:36,177 | INFO     | current memory leak: -4.67 B/s (using 306 data points, chi2=0.22)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,178 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,178 | INFO     | ..............................
[2026-01-11 01:04:46] 2026-01-11 00:03:36,178 | INFO     | . Timing measurements:
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . get job = 0 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . initial setup = 11 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . payload setup = 159 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . stage-in = 0 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . payload execution = 21025 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . stage-out = 3 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,179 | INFO     | . log creation = 1 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,180 | INFO     | ..............................
[2026-01-11 01:04:46] 2026-01-11 00:03:36,344 | INFO     | 
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | job summary report
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | --------------------------------------------------
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | PanDA job id: 6965383433
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | task id: 47898826
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | errors: (none)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | pilot state: finished 
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | transexitcode: 0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | exeerrorcode: 0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,345 | INFO     | exeerrordiag: 
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | exitcode: 0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | exitmsg: OK
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | cpuconsumptiontime: 79275 s
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | nevents: 400
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | neventsw: 0
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | pid: 30838
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | pgrp: 30838
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | corecount: 8
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | event service: False
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | sizes: {0: 2283092, 1: 2283948, 2: 2283976, 13: 2283976, 24: 2284032, 34: 2284060, 45: 2284216, 56: 2284244, 67: 2284272, 77: 2284300, 88: 2284356, 99: 2284664, 11
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | --------------------------------------------------
[2026-01-11 01:04:46] 2026-01-11 00:03:36,346 | INFO     | 
[2026-01-11 01:04:46] 2026-01-11 00:03:36,347 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-11 01:04:46] 2026-01-11 00:03:36,647 | INFO     | time since job start (21517s) is within the limit (349056.0s)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,859 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,859 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,859 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,861 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:04:46] 2026-01-11 00:03:36,862 | INFO     | job 6965383433 has completed (purged errors)
[2026-01-11 01:04:46] 2026-01-11 00:03:36,862 | INFO     | overall cleanup function is called
[2026-01-11 01:04:46] 2026-01-11 00:03:37,871 | INFO     | --- collectZombieJob: --- 10, [30838]
[2026-01-11 01:04:46] 2026-01-11 00:03:37,872 | INFO     | zombie collector waiting for pid 30838
[2026-01-11 01:04:46] 2026-01-11 00:03:37,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:04:46] 2026-01-11 00:03:37,872 | INFO     | collected zombie processes
[2026-01-11 01:04:46] 2026-01-11 00:03:37,872 | INFO     | will attempt to kill all subprocesses of pid=30838
[2026-01-11 01:04:46] 2026-01-11 00:03:37,971 | INFO     | process IDs to be killed: [30838] (in reverse order)
[2026-01-11 01:04:46] 2026-01-11 00:03:38,835 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:04:46] 2026-01-11 00:03:38,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:04:46] 2026-01-11 00:03:38,838 | INFO     | did not find any defunct processes belonging to 30838
[2026-01-11 01:04:46] 2026-01-11 00:03:38,839 | INFO     | did not find any defunct processes belonging to 30838
[2026-01-11 01:04:46] 2026-01-11 00:03:38,840 | INFO     | ready for new job
[2026-01-11 01:04:46] 2026-01-11 00:03:38,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:04:46] 2026-01-11 00:03:38,842 | INFO     | ***************************************
[2026-01-11 01:04:46] 2026-01-11 00:03:38,842 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:04:46] 2026-01-11 00:03:38,842 | INFO     | ***************************************
[2026-01-11 01:04:46] 2026-01-11 00:03:38,843 | INFO     | 
[2026-01-11 01:04:46] 2026-01-11 00:03:38,843 | INFO     | pilot is running in a VM
[2026-01-11 01:04:46] 2026-01-11 00:03:38,843 | INFO     | architecture information:
[2026-01-11 01:04:46] 2026-01-11 00:03:38,855 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:04:46] 2026-01-11 00:03:39,015 | INFO     | cat /etc/os-release:
[2026-01-11 01:04:46] NAME="CentOS Linux"
[2026-01-11 01:04:46] VERSION="7 (Core)"
[2026-01-11 01:04:46] ID="centos"
[2026-01-11 01:04:46] ID_LIKE="rhel fedora"
[2026-01-11 01:04:46] VERSION_ID="7"
[2026-01-11 01:04:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:04:46] ANSI_COLOR="0;31"
[2026-01-11 01:04:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:04:46] HOME_URL="https://www.centos.org/"
[2026-01-11 01:04:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:04:46] 
[2026-01-11 01:04:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:04:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:04:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:04:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:04:46] 
[2026-01-11 01:04:46] 2026-01-11 00:03:39,015 | INFO     | ***************************************
[2026-01-11 01:04:46] 2026-01-11 00:03:39,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-11 01:04:46] 2026-01-11 00:03:39,675 | INFO     | sufficient remaining disk space (497636343808 B)
[2026-01-11 01:04:46] 2026-01-11 00:03:39,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:04:46] 2026-01-11 00:03:39,676 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:04:46] 2026-01-11 00:03:39,676 | INFO     | update_server=False
[2026-01-11 01:04:46] 2026-01-11 00:03:39,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:04:46] 2026-01-11 00:03:39,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:04:46] 2026-01-11 00:03:39,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:04:46] 2026-01-11 00:03:39,680 | INFO     | aborting loop
[2026-01-11 01:04:46] 2026-01-11 00:03:40,084 | INFO     | all data control threads have been joined
[2026-01-11 01:04:46] 2026-01-11 00:03:40,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:04:46] 2026-01-11 00:03:40,378 | INFO     | all job control threads have been joined
[2026-01-11 01:04:46] 2026-01-11 00:03:40,574 | INFO     | all payload control threads have been joined
[2026-01-11 01:04:46] 2026-01-11 00:03:40,682 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:40,686 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:40,767 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:40,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:40,994 | INFO     | [job] validate thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,081 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,090 | INFO     | [data] control thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,308 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:04:46] 2026-01-11 00:03:41,384 | INFO     | [job] control thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,580 | INFO     | [payload] control thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,628 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,684 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,696 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:41,852 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:42,320 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:03:44,238 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:04:46] 2026-01-11 00:04:09,751 | INFO     | PID=24383 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 01:04:46] 2026-01-11 00:04:09,751 | INFO     | .. there are 2 such processes running
[2026-01-11 01:04:46] 2026-01-11 00:04:09,752 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:04:46] 2026-01-11 00:04:09,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:04:46] 2026-01-11 00:04:09,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:04:46] 2026-01-11 00:04:35,413 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:04:46] 2026-01-11 00:04:35,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048160036672)>', '<ExcThread(monitor, started 140047206577920)>']
[2026-01-11 01:04:46] 2026-01-11 00:04:35,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:04:46] 2026-01-11 00:04:35,909 | INFO     | [monitor] control thread has ended
[2026-01-11 01:04:46] 2026-01-11 00:04:40,911 | INFO     | all workflow threads have been joined
[2026-01-11 01:04:46] 2026-01-11 00:04:40,912 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:04:46] 2026-01-11 00:04:40,912 | INFO     | traces error code: 0
[2026-01-11 01:04:46] 2026-01-11 00:04:40,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:04:46] 2026-01-11 00:04:41,249 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:04:46] 2026-01-11 00:04:41,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:04:46] 2026-01-11 00:04:41,401 [wrapper] pilotpid: 24383
[2026-01-11 01:04:46] 2026-01-11 00:04:41,489 [wrapper] Pilot exit status: 0
[2026-01-11 01:04:46] 2026-01-11 00:04:41,734 [wrapper] pandaids: 6965383433
[2026-01-11 01:04:46] 2026-01-11 00:04:43,012 [wrapper] cleanup supervisor_pilot 29822 24384
[2026-01-11 01:04:46] 2026-01-11 00:04:43,160 [wrapper] Test setup, not cleaning
[2026-01-11 01:04:46] 2026-01-11 00:04:43,330 [wrapper] apfmon messages muted
[2026-01-11 01:04:46] 2026-01-11 00:04:43,420 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:04:46] 2026-01-11 00:04:43,508 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:04:46]  *** Error codes and diagnostics ***
[2026-01-11 01:04:46]     "exeErrorCode": 0,
[2026-01-11 01:04:46]     "exeErrorDiag": "",
[2026-01-11 01:04:46]     "pilotErrorCode": 0,
[2026-01-11 01:04:46]     "pilotErrorDiag": "",
[2026-01-11 01:04:46]  *** Listing of results directory ***
[2026-01-11 01:04:46] total 441840
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-11 01:04:46] -rwx------. 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:11 queuedata.json
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc       100 Jan 10 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:04:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 19:00 run_atlas
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc       105 Jan 10 19:00 job.xml
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc      6389 Jan 10 19:00 init_data.xml
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc 226042927 Jan 10 19:00 EVNT.47898824._001468.pool.root.1
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc     15847 Jan 10 19:00 start_atlas.sh
[2026-01-11 01:04:46] drwxrwx--x. 2 boinc boinc        68 Jan 10 19:00 shared
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc    592407 Jan 10 19:00 input.tar.gz
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc         0 Jan 10 19:00 boinc_lockfile
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc      2519 Jan 10 19:00 pandaJob.out
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc    989548 Jan 10 19:04 agis_schedconf.cvmfs.json
[2026-01-11 01:04:46] drwx------. 5 boinc boinc      4096 Jan 10 19:04 pilot3
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc 215701301 Jan 11 01:00 HITS.47898826._040573.pool.root.1
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc       531 Jan 11 01:00 boinc_task_state.xml
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc      1012 Jan 11 01:01 memory_monitor_summary.json
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc   1516240 Jan 11 01:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc    545349 Jan 11 01:02 log.47898826._040573.job.log.tgz.1
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc        95 Jan 11 01:03 pilot_heartbeat.json
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc      7777 Jan 11 01:03 heartbeat.json
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc        28 Jan 11 01:04 wrapper_checkpoint.txt
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc      8192 Jan 11 01:04 boinc_mmap_file
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc      4884 Jan 11 01:04 pilotlog.txt
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc   2854437 Jan 11 01:04 log.47898826._040573.job.log.1
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc       357 Jan 11 01:04 output.list
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc       620 Jan 11 01:04 runtime_log
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc   3420160 Jan 11 01:04 result.tar.gz
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc      8817 Jan 11 01:04 runtime_log.err
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc       657 Jan 11 01:04 PJgMDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhlmKDmljxyxm.diag
[2026-01-11 01:04:46] -rw-r--r--. 1 boinc boinc     20787 Jan 11 01:04 stderr.txt
[2026-01-11 01:04:46] HITS file was successfully produced:
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc 215701301 Jan 11 01:00 shared/HITS.pool.root.1
[2026-01-11 01:04:46]  *** Contents of shared directory: ***
[2026-01-11 01:04:46] total 435332
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc 226042927 Jan 10 19:00 ATLAS.root_0
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc     15847 Jan 10 19:00 start_atlas.sh
[2026-01-11 01:04:46] -rw-r--r--. 2 boinc boinc    592407 Jan 10 19:00 input.tar.gz
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc 215701301 Jan 11 01:00 HITS.pool.root.1
[2026-01-11 01:04:46] -rw-------. 1 boinc boinc   3420160 Jan 11 01:04 result.tar.gz
01:04:48 (20644): run_atlas exited; CPU time 79486.816477
01:04:48 (20644): called boinc_finish(0)

</stderr_txt>
]]>

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