Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:03 (784036): wrapper (7.7.26015): starting
08:13:03 (784036): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:13:03] Arguments: --nthreads 10
[2026-01-10 08:13:03] Threads: 10
[2026-01-10 08:13:03] Checking for CVMFS
[2026-01-10 08:13:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:04] 2.13.3.0 4282 15318 193132 154980 3 15 27370487 39288832 4310 16776704 0 7715221 99.815 11265873 38372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:13:04] CVMFS is ok
[2026-01-10 08:13:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:04] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:04] Checking for apptainer binary...
[2026-01-10 08:13:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:04] Running /usr/bin/apptainer --version
[2026-01-10 08:13:04] apptainer version 1.4.5-2.el9
[2026-01-10 08:13:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:05] c-211-32.aglt2.org
[2026-01-10 08:13:05] apptainer works
[2026-01-10 08:13:05] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:13:05] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:13:05] Starting ATLAS job with PandaID=6965383411
[2026-01-10 08:13:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:45:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:45:04] 2026-01-11 00:44:07,540 | INFO     | monitor loop #2471: job 0:6965383411 is in state 'finished'
[2026-01-10 19:45:04] 2026-01-11 00:44:07,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:45:04] 2026-01-11 00:44:07,898 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:45:04] 2026-01-11 00:44:07,920 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9929249999996
[2026-01-10 19:45:04] 2026-01-11 00:44:07,947 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383411/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:45:04] 2026-01-11 00:44:07,948 | INFO     | extracted standard info from prmon json
[2026-01-10 19:45:04] 2026-01-11 00:44:07,949 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:45:04] 2026-01-11 00:44:07,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:45:04] 2026-01-11 00:44:07,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 19:45:04] 2026-01-11 00:44:07,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 19:45:04] 2026-01-11 00:44:08,020 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:45:04] 2026-01-11 00:44:08,030 | INFO     | sum of square deviations: 96641209717.15034
[2026-01-10 19:45:04] 2026-01-11 00:44:08,069 | INFO     | sum of deviations: 93658476845.22125
[2026-01-10 19:45:04] 2026-01-11 00:44:08,069 | INFO     | mean x: 1768071542.0353982
[2026-01-10 19:45:04] 2026-01-11 00:44:08,070 | INFO     | mean y: 2634068.865781711
[2026-01-10 19:45:04] 2026-01-11 00:44:08,070 | INFO     | intersect: -1710867739.1629088
[2026-01-10 19:45:04] 2026-01-11 00:44:08,071 | INFO     | chi2: 2.5089939817965012
[2026-01-10 19:45:04] 2026-01-11 00:44:08,080 | INFO     | sum of square deviations: 94519111420.86797
[2026-01-10 19:45:04] 2026-01-11 00:44:08,095 | INFO     | sum of deviations: 137911449322.7681
[2026-01-10 19:45:04] 2026-01-11 00:44:08,096 | INFO     | mean x: 1768071389.5453196
[2026-01-10 19:45:04] 2026-01-11 00:44:08,096 | INFO     | mean y: 2637229.4502228824
[2026-01-10 19:45:04] 2026-01-11 00:44:08,096 | INFO     | intersect: -2577129805.7324734
[2026-01-10 19:45:04] 2026-01-11 00:44:08,097 | INFO     | chi2: 1.8145115241804812
[2026-01-10 19:45:04] 2026-01-11 00:44:08,097 | INFO     | current chi2=1.8145115241804812 (change=27.6797179528806 %)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,098 | INFO     | sum of square deviations: 92428151589.3698
[2026-01-10 19:45:04] 2026-01-11 00:44:08,111 | INFO     | sum of deviations: 136370878522.93695
[2026-01-10 19:45:04] 2026-01-11 00:44:08,112 | INFO     | mean x: 1768071237.0494013
[2026-01-10 19:45:04] 2026-01-11 00:44:08,112 | INFO     | mean y: 2637117.0928143715
[2026-01-10 19:45:04] 2026-01-11 00:44:08,112 | INFO     | intersect: -2606020783.5731697
[2026-01-10 19:45:04] 2026-01-11 00:44:08,113 | INFO     | chi2: 1.814647700344908
[2026-01-10 19:45:04] 2026-01-11 00:44:08,113 | INFO     | current chi2=1.814647700344908 (change=-0.007504838774073999 %)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,113 | INFO     | right removable region: 667
[2026-01-10 19:45:04] 2026-01-11 00:44:08,114 | INFO     | sum of square deviations: 94518517522.77615
[2026-01-10 19:45:04] 2026-01-11 00:44:08,130 | INFO     | sum of deviations: -42743444607.38338
[2026-01-10 19:45:04] 2026-01-11 00:44:08,130 | INFO     | mean x: 1768071694.5468054
[2026-01-10 19:45:04] 2026-01-11 00:44:08,130 | INFO     | mean y: 2643847.821693908
[2026-01-10 19:45:04] 2026-01-11 00:44:08,131 | INFO     | intersect: 802206478.7054557
[2026-01-10 19:45:04] 2026-01-11 00:44:08,132 | INFO     | chi2: 0.8495200153311513
[2026-01-10 19:45:04] 2026-01-11 00:44:08,132 | INFO     | current chi2=0.8495200153311513 (change=66.14101024176733 %)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,133 | INFO     | sum of square deviations: 92427128240.72313
[2026-01-10 19:45:04] 2026-01-11 00:44:08,152 | INFO     | sum of deviations: -76808931512.00752
[2026-01-10 19:45:04] 2026-01-11 00:44:08,152 | INFO     | mean x: 1768071847.0583832
[2026-01-10 19:45:04] 2026-01-11 00:44:08,153 | INFO     | mean y: 2646331.974550898
[2026-01-10 19:45:04] 2026-01-11 00:44:08,153 | INFO     | intersect: 1471952064.9766638
[2026-01-10 19:45:04] 2026-01-11 00:44:08,154 | INFO     | chi2: 0.7666826450154194
[2026-01-10 19:45:04] 2026-01-11 00:44:08,154 | INFO     | current chi2=0.7666826450154194 (change=9.75107929428138 %)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,154 | INFO     | left removable region: 20
[2026-01-10 19:45:04] 2026-01-11 00:44:08,155 | INFO     | sum of square deviations: 83981592336.11435
[2026-01-10 19:45:04] 2026-01-11 00:44:08,168 | INFO     | sum of deviations: -26380093085.52861
[2026-01-10 19:45:04] 2026-01-11 00:44:08,168 | INFO     | mean x: 1768071816.5749614
[2026-01-10 19:45:04] 2026-01-11 00:44:08,168 | INFO     | mean y: 2649152.85625966
[2026-01-10 19:45:04] 2026-01-11 00:44:08,169 | INFO     | intersect: 558031562.3308878
[2026-01-10 19:45:04] 2026-01-11 00:44:08,170 | INFO     | chi2: 0.06510650297717148
[2026-01-10 19:45:04] 2026-01-11 00:44:08,170 | INFO     | current memory leak: -0.31 B/s (using 647 data points, chi2=0.07)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,171 | INFO     | could have reported an average CPU frequency of 2899 MHz (26 samples)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,171 | INFO     | ..............................
[2026-01-10 19:45:04] 2026-01-11 00:44:08,171 | INFO     | . Timing measurements:
[2026-01-10 19:45:04] 2026-01-11 00:44:08,171 | INFO     | . get job = 0 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . initial setup = 4 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . payload setup = 17 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . stage-in = 0 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . payload execution = 41344 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . stage-out = 4 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | . log creation = 0 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,172 | INFO     | ..............................
[2026-01-10 19:45:04] 2026-01-11 00:44:08,310 | INFO     | 
[2026-01-10 19:45:04] 2026-01-11 00:44:08,310 | INFO     | job summary report
[2026-01-10 19:45:04] 2026-01-11 00:44:08,310 | INFO     | --------------------------------------------------
[2026-01-10 19:45:04] 2026-01-11 00:44:08,310 | INFO     | PanDA job id: 6965383411
[2026-01-10 19:45:04] 2026-01-11 00:44:08,310 | INFO     | task id: 47898826
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | errors: (none)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | pilot state: finished 
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | transexitcode: 0
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | exeerrorcode: 0
[2026-01-10 19:45:04] 2026-01-11 00:44:08,311 | INFO     | exeerrordiag: 
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | exitcode: 0
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | exitmsg: OK
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | cpuconsumptiontime: 107432 s
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | nevents: 400
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | neventsw: 0
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | pid: 797371
[2026-01-10 19:45:04] 2026-01-11 00:44:08,312 | INFO     | pgrp: 797371
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | corecount: 10
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | event service: False
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283777, 3: 2283976, 4: 2284004, 15: 2284032, 21: 2284450, 26: 2284478, 41366: 2327327, 41367: 2327326, 41372: 2336716, 41388: 2
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | --------------------------------------------------
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | 
[2026-01-10 19:45:04] 2026-01-11 00:44:08,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:45:04] 2026-01-11 00:44:08,335 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:45:04] 2026-01-11 00:44:08,339 | INFO     | job 6965383411 has completed (purged errors)
[2026-01-10 19:45:04] 2026-01-11 00:44:08,339 | INFO     | overall cleanup function is called
[2026-01-10 19:45:04] 2026-01-11 00:44:09,349 | INFO     | --- collectZombieJob: --- 10, [797371]
[2026-01-10 19:45:04] 2026-01-11 00:44:09,349 | INFO     | zombie collector waiting for pid 797371
[2026-01-10 19:45:04] 2026-01-11 00:44:09,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:45:04] 2026-01-11 00:44:09,350 | INFO     | collected zombie processes
[2026-01-10 19:45:04] 2026-01-11 00:44:09,350 | INFO     | will attempt to kill all subprocesses of pid=797371
[2026-01-10 19:45:04] 2026-01-11 00:44:09,860 | INFO     | process IDs to be killed: [797371] (in reverse order)
[2026-01-10 19:45:04] 2026-01-11 00:44:09,929 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:45:04] 2026-01-11 00:44:09,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:45:04] 2026-01-11 00:44:09,938 | INFO     | did not find any defunct processes belonging to 797371
[2026-01-10 19:45:04] 2026-01-11 00:44:09,947 | INFO     | did not find any defunct processes belonging to 797371
[2026-01-10 19:45:04] 2026-01-11 00:44:09,948 | INFO     | ready for new job
[2026-01-10 19:45:04] 2026-01-11 00:44:09,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:45:04] 2026-01-11 00:44:09,951 | INFO     | ***************************************
[2026-01-10 19:45:04] 2026-01-11 00:44:09,952 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:45:04] 2026-01-11 00:44:09,952 | INFO     | ***************************************
[2026-01-10 19:45:04] 2026-01-11 00:44:09,952 | INFO     | 
[2026-01-10 19:45:04] 2026-01-11 00:44:09,954 | INFO     | architecture information:
[2026-01-10 19:45:04] 2026-01-11 00:44:09,954 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:45:04] 2026-01-11 00:44:09,971 | INFO     | cat /etc/os-release:
[2026-01-10 19:45:04] NAME="CentOS Linux"
[2026-01-10 19:45:04] VERSION="7 (Core)"
[2026-01-10 19:45:04] ID="centos"
[2026-01-10 19:45:04] ID_LIKE="rhel fedora"
[2026-01-10 19:45:04] VERSION_ID="7"
[2026-01-10 19:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:45:04] ANSI_COLOR="0;31"
[2026-01-10 19:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:45:04] HOME_URL="https://www.centos.org/"
[2026-01-10 19:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:45:04] 
[2026-01-10 19:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:45:04] 
[2026-01-10 19:45:04] 2026-01-11 00:44:09,972 | INFO     | ***************************************
[2026-01-10 19:45:04] 2026-01-11 00:44:10,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:45:04] 2026-01-11 00:44:10,509 | INFO     | sufficient remaining disk space (53783560192 B)
[2026-01-10 19:45:04] 2026-01-11 00:44:10,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:45:04] 2026-01-11 00:44:10,510 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:45:04] 2026-01-11 00:44:10,510 | INFO     | update_server=False
[2026-01-10 19:45:04] 2026-01-11 00:44:10,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:45:04] 2026-01-11 00:44:10,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:45:04] 2026-01-11 00:44:11,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:45:04] 2026-01-11 00:44:11,060 | INFO     | aborting loop
[2026-01-10 19:45:04] 2026-01-11 00:44:11,189 | INFO     | all job control threads have been joined
[2026-01-10 19:45:04] 2026-01-11 00:44:11,223 | INFO     | all data control threads have been joined
[2026-01-10 19:45:04] 2026-01-11 00:44:11,516 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:11,665 | INFO     | all payload control threads have been joined
[2026-01-10 19:45:04] 2026-01-11 00:44:11,877 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,066 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,106 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,150 | INFO     | [job] validate thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,159 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,195 | INFO     | [job] control thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,229 | INFO     | [data] control thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,526 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,671 | INFO     | [payload] control thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:45:04] 2026-01-11 00:44:12,899 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,945 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:12,981 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:13,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:45:04] 2026-01-11 00:44:14,340 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:16,774 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:45:04] 2026-01-11 00:44:41,431 | INFO     | PID=787865 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:45:04] 2026-01-11 00:44:41,431 | INFO     | .. there are 6 such processes running
[2026-01-10 19:45:04] 2026-01-11 00:44:41,432 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:45:04] 2026-01-11 00:44:41,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:45:04] 2026-01-11 00:44:41,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:45:04] 2026-01-11 00:44:57,292 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:45:04] 2026-01-11 00:44:57,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105626830656)>', '<ExcThread(monitor, started 140105272497920)>']
[2026-01-10 19:45:04] 2026-01-11 00:44:58,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:45:04] 2026-01-11 00:44:58,536 | INFO     | [monitor] control thread has ended
[2026-01-10 19:45:04] 2026-01-11 00:45:02,998 | INFO     | all workflow threads have been joined
[2026-01-10 19:45:04] 2026-01-11 00:45:03,003 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:45:04] 2026-01-11 00:45:03,004 | INFO     | traces error code: 0
[2026-01-10 19:45:04] 2026-01-11 00:45:03,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:45:04] 2026-01-11 00:45:03,535 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:45:04] 2026-01-11 00:45:03,588 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:45:04] 2026-01-11 00:45:03,636 [wrapper] pilotpid: 787865
[2026-01-10 19:45:04] 2026-01-11 00:45:03,676 [wrapper] Pilot exit status: 0
[2026-01-10 19:45:04] 2026-01-11 00:45:03,905 [wrapper] pandaids: 6965383411
[2026-01-10 19:45:04] 2026-01-11 00:45:04,139 [wrapper] cleanup supervisor_pilot 1682495 787866
[2026-01-10 19:45:04] 2026-01-11 00:45:04,142 [wrapper] Test setup, not cleaning
[2026-01-10 19:45:04] 2026-01-11 00:45:04,145 [wrapper] apfmon messages muted
[2026-01-10 19:45:04] 2026-01-11 00:45:04,148 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:45:04] 2026-01-11 00:45:04,150 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:45:04]  *** Error codes and diagnostics ***
[2026-01-10 19:45:04]     "exeErrorCode": 0,
[2026-01-10 19:45:04]     "exeErrorDiag": "",
[2026-01-10 19:45:04]     "pilotErrorCode": 0,
[2026-01-10 19:45:04]     "pilotErrorDiag": "",
[2026-01-10 19:45:04]  *** Listing of results directory ***
[2026-01-10 19:45:04] total 446720
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 19:45:04] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:45:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas 226042306 Jan 10 08:13 EVNT.47898824._001431.pool.root.1
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 19:45:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 08:13 input.tar.gz
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:13 pandaJob.out
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas        57 Jan 10 08:13 setup.sh.local
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas    989556 Jan 10 08:13 agis_schedconf.cvmfs.json
[2026-01-10 19:45:04] drwx------. 5 boincer umatlas      4096 Jan 10 08:13 pilot3
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas      6526 Jan 10 19:36 init_data.xml
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas 215564635 Jan 10 19:42 HITS.47898826._040551.pool.root.1
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas       532 Jan 10 19:43 boinc_task_state.xml
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas      1036 Jan 10 19:43 memory_monitor_summary.json
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:43 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas    831190 Jan 10 19:43 log.47898826._040551.job.log.tgz.1
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas      7816 Jan 10 19:44 heartbeat.json
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas        95 Jan 10 19:44 pilot_heartbeat.json
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:44 boinc_mmap_file
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas        29 Jan 10 19:44 wrapper_checkpoint.txt
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas      4822 Jan 10 19:45 pilotlog.txt
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas   5126382 Jan 10 19:45 log.47898826._040551.job.log.1
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas       357 Jan 10 19:45 output.list
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:45 runtime_log
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas   5980160 Jan 10 19:45 result.tar.gz
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas       660 Jan 10 19:45 yY5LDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVlmKDmowlSzn.diag
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 19:45 runtime_log.err
[2026-01-10 19:45:04] -rw-r--r--. 1 boincer umatlas     21232 Jan 10 19:45 stderr.txt
[2026-01-10 19:45:04] HITS file was successfully produced:
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas 215564635 Jan 10 19:42 shared/HITS.pool.root.1
[2026-01-10 19:45:04]  *** Contents of shared directory: ***
[2026-01-10 19:45:04] total 437704
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas 226042306 Jan 10 08:13 ATLAS.root_0
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 19:45:04] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 08:13 input.tar.gz
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas 215564635 Jan 10 19:42 HITS.pool.root.1
[2026-01-10 19:45:04] -rw-------. 1 boincer umatlas   5980160 Jan 10 19:45 result.tar.gz
19:45:05 (784036): run_atlas exited; CPU time 108466.585364
19:45:05 (784036): called boinc_finish(0)

</stderr_txt>
]]>

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