Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:09 (2964253): wrapper (7.7.26015): starting
08:13:09 (2964253): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:13:09] Arguments: --nthreads 11
[2026-01-10 08:13:09] Threads: 11
[2026-01-10 08:13:09] Checking for CVMFS
[2026-01-10 08:13:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:12] 2.13.3.0 10954 94893 395780 154980 1 141 25535974 32935937 7754 16776704 26 362609898 99.474 529087901 38301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:13:12] CVMFS is ok
[2026-01-10 08:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:12] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:12] Checking for apptainer binary...
[2026-01-10 08:13:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:12] Running /usr/bin/apptainer --version
[2026-01-10 08:13:12] apptainer version 1.4.5-2.el9
[2026-01-10 08:13:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:13] c7-11-13.aglt2.org
[2026-01-10 08:13:13] apptainer works
[2026-01-10 08:13:13] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:13:13] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:13:13] Starting ATLAS job with PandaID=6965383416
[2026-01-10 08:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:20:05 (2964253): BOINC client no longer exists - exiting
08:20:05 (2964253): timer handler: client dead, exiting
08:28:27 (2991480): wrapper (7.7.26015): starting
08:28:27 (2991480): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:28:27] Arguments: --nthreads 11
[2026-01-10 08:28:27] Threads: 11
[2026-01-10 08:28:27] This job has been restarted, cleaning up previous attempt
[2026-01-10 08:28:27] Checking for CVMFS
[2026-01-10 08:28:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:28:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:28:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:28:29] 2.13.3.0 10954 94908 396676 154981 2 233 25551505 32935937 6812 16776704 26 362654539 99.474 529089244 38301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:28:29] CVMFS is ok
[2026-01-10 08:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:28:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:28:29] Further information can be found at the LHC@home message board.
[2026-01-10 08:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:28:29] Checking for apptainer binary...
[2026-01-10 08:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:28:29] Running /usr/bin/apptainer --version
[2026-01-10 08:28:29] apptainer version 1.4.5-2.el9
[2026-01-10 08:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:28:30] c7-11-13.aglt2.org
[2026-01-10 08:28:30] apptainer works
[2026-01-10 08:28:30] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:28:30] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:28:30] Starting ATLAS job with PandaID=6965383416
[2026-01-10 08:28:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:37:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:37:56] 2026-01-10 16:37:21,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,412 | INFO     | time since job start (11287s) is within the limit (349056.0s)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,469 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:37:56] 2026-01-10 16:37:22,474 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.5632656249995
[2026-01-10 11:37:56] 2026-01-10 16:37:22,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383416/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,486 | INFO     | extracted standard info from prmon json
[2026-01-10 11:37:56] 2026-01-10 16:37:22,487 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:37:56] 2026-01-10 16:37:22,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:37:56] 2026-01-10 16:37:22,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:37:56] 2026-01-10 16:37:22,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:37:56] 2026-01-10 16:37:22,491 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:37:56] 2026-01-10 16:37:22,491 | INFO     | sum of square deviations: 1899897251.0273173
[2026-01-10 11:37:56] 2026-01-10 16:37:22,492 | INFO     | sum of deviations: -35426567335.136635
[2026-01-10 11:37:56] 2026-01-10 16:37:22,492 | INFO     | mean x: 1768057436.896175
[2026-01-10 11:37:56] 2026-01-10 16:37:22,493 | INFO     | mean y: 2716561.5191256832
[2026-01-10 11:37:56] 2026-01-10 16:37:22,493 | INFO     | intersect: 32970923556.251404
[2026-01-10 11:37:56] 2026-01-10 16:37:22,493 | INFO     | chi2: 2.4943670333482517
[2026-01-10 11:37:56] 2026-01-10 16:37:22,493 | INFO     | sum of square deviations: 1748389199.2359548
[2026-01-10 11:37:56] 2026-01-10 16:37:22,494 | INFO     | sum of deviations: -21795865452.235954
[2026-01-10 11:37:56] 2026-01-10 16:37:22,494 | INFO     | mean x: 1768057284.4157302
[2026-01-10 11:37:56] 2026-01-10 16:37:22,494 | INFO     | mean y: 2730003.584269663
[2026-01-10 11:37:56] 2026-01-10 16:37:22,494 | INFO     | intersect: 22043782819.405426
[2026-01-10 11:37:56] 2026-01-10 16:37:22,495 | INFO     | chi2: 1.7956794456610374
[2026-01-10 11:37:56] 2026-01-10 16:37:22,495 | INFO     | current chi2=1.7956794456610374 (change=28.01061665529424 %)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,495 | INFO     | sum of square deviations: 1605138778.023122
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | sum of deviations: -20790288017.242786
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | mean x: 1768057131.9248555
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | mean y: 2731074.289017341
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | intersect: 22903191462.473885
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | chi2: 1.7931069844121352
[2026-01-10 11:37:56] 2026-01-10 16:37:22,496 | INFO     | current chi2=1.7931069844121352 (change=0.14325837805395222 %)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,497 | INFO     | right removable region: 172
[2026-01-10 11:37:56] 2026-01-10 16:37:22,497 | INFO     | sum of square deviations: 1748300199.3988786
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | sum of deviations: -64381144065.97184
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | mean x: 1768057589.4213483
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | mean y: 2745305.466292135
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | intersect: 65111455137.22685
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | chi2: 1.0324273156625894
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | current chi2=1.0324273156625894 (change=58.60964718264673 %)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,498 | INFO     | sum of square deviations: 1605014583.1676311
[2026-01-10 11:37:56] 2026-01-10 16:37:22,499 | INFO     | sum of deviations: -60394955459.87865
[2026-01-10 11:37:56] 2026-01-10 16:37:22,499 | INFO     | mean x: 1768057741.930636
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | mean y: 2741002.2601156067
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | intersect: 66532833435.222046
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | chi2: 1.0189923074985305
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | current chi2=1.0189923074985305 (change=1.3013030515796216 %)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | left removable region: 20
[2026-01-10 11:37:56] 2026-01-10 16:37:22,500 | INFO     | sum of square deviations: 1088519215.8355253
[2026-01-10 11:37:56] 2026-01-10 16:37:22,501 | INFO     | sum of deviations: -31117772606.67107
[2026-01-10 11:37:56] 2026-01-10 16:37:22,501 | INFO     | mean x: 1768057711.4671052
[2026-01-10 11:37:56] 2026-01-10 16:37:22,501 | INFO     | mean y: 2739912.0657894737
[2026-01-10 11:37:56] 2026-01-10 16:37:22,501 | INFO     | intersect: 50546650410.39715
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | chi2: 0.2619013308774754
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | current memory leak: -28.59 B/s (using 152 data points, chi2=0.26)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | could have reported an average CPU frequency of 3291 MHz (10 samples)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | ..............................
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | . Timing measurements:
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | . get job = 0 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | . initial setup = 2 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,502 | INFO     | . payload setup = 31 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,503 | INFO     | . stage-in = 0 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,503 | INFO     | . payload execution = 11171 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,503 | INFO     | . stage-out = 2 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,503 | INFO     | . log creation = 0 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,503 | INFO     | ..............................
[2026-01-10 11:37:56] 2026-01-10 16:37:22,591 | INFO     | 
[2026-01-10 11:37:56] 2026-01-10 16:37:22,592 | INFO     | job summary report
[2026-01-10 11:37:56] 2026-01-10 16:37:22,592 | INFO     | --------------------------------------------------
[2026-01-10 11:37:56] 2026-01-10 16:37:22,592 | INFO     | PanDA job id: 6965383416
[2026-01-10 11:37:56] 2026-01-10 16:37:22,592 | INFO     | task id: 47898826
[2026-01-10 11:37:56] 2026-01-10 16:37:22,592 | INFO     | errors: (none)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | pilot state: finished 
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | transexitcode: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | exeerrorcode: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | exeerrordiag: 
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | exitcode: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | exitmsg: OK
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | cpuconsumptiontime: 46356 s
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | nevents: 400
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | neventsw: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | pid: 3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | pgrp: 3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:22,597 | INFO     | corecount: 11
[2026-01-10 11:37:56] 2026-01-10 16:37:22,598 | INFO     | event service: False
[2026-01-10 11:37:56] 2026-01-10 16:37:22,604 | INFO     | sizes: {0: 2283693, 1: 2283948, 2: 2283948, 13: 2283976, 24: 2284032, 34: 2284060, 37: 2284478, 45: 2284506, 11206: 2313707, 11207: 2313706, 11209: 2322760, 11211:
[2026-01-10 11:37:56] 2026-01-10 16:37:22,604 | INFO     | --------------------------------------------------
[2026-01-10 11:37:56] 2026-01-10 16:37:22,605 | INFO     | 
[2026-01-10 11:37:56] 2026-01-10 16:37:22,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 11:37:56] 2026-01-10 16:37:22,632 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,632 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | job 6965383416 has completed (purged errors)
[2026-01-10 11:37:56] 2026-01-10 16:37:22,634 | INFO     | overall cleanup function is called
[2026-01-10 11:37:56] 2026-01-10 16:37:23,643 | INFO     | --- collectZombieJob: --- 10, [3014518]
[2026-01-10 11:37:56] 2026-01-10 16:37:23,643 | INFO     | zombie collector waiting for pid 3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:23,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:37:56] 2026-01-10 16:37:23,643 | INFO     | collected zombie processes
[2026-01-10 11:37:56] 2026-01-10 16:37:23,643 | INFO     | will attempt to kill all subprocesses of pid=3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:24,006 | INFO     | process IDs to be killed: [3014518] (in reverse order)
[2026-01-10 11:37:56] 2026-01-10 16:37:24,126 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:37:56] 2026-01-10 16:37:24,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:37:56] 2026-01-10 16:37:24,155 | INFO     | did not find any defunct processes belonging to 3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:24,173 | INFO     | did not find any defunct processes belonging to 3014518
[2026-01-10 11:37:56] 2026-01-10 16:37:24,173 | INFO     | ready for new job
[2026-01-10 11:37:56] 2026-01-10 16:37:24,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:37:56] 2026-01-10 16:37:24,179 | INFO     | ***************************************
[2026-01-10 11:37:56] 2026-01-10 16:37:24,179 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:37:56] 2026-01-10 16:37:24,179 | INFO     | ***************************************
[2026-01-10 11:37:56] 2026-01-10 16:37:24,179 | INFO     | 
[2026-01-10 11:37:56] 2026-01-10 16:37:24,187 | INFO     | architecture information:
[2026-01-10 11:37:56] 2026-01-10 16:37:24,195 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:37:56] 2026-01-10 16:37:24,217 | INFO     | cat /etc/os-release:
[2026-01-10 11:37:56] NAME="CentOS Linux"
[2026-01-10 11:37:56] VERSION="7 (Core)"
[2026-01-10 11:37:56] ID="centos"
[2026-01-10 11:37:56] ID_LIKE="rhel fedora"
[2026-01-10 11:37:56] VERSION_ID="7"
[2026-01-10 11:37:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:37:56] ANSI_COLOR="0;31"
[2026-01-10 11:37:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:37:56] HOME_URL="https://www.centos.org/"
[2026-01-10 11:37:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:37:56] 
[2026-01-10 11:37:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:37:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:37:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:37:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:37:56] 
[2026-01-10 11:37:56] 2026-01-10 16:37:24,219 | INFO     | ***************************************
[2026-01-10 11:37:56] 2026-01-10 16:37:24,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 11:37:56] 2026-01-10 16:37:24,745 | INFO     | sufficient remaining disk space (94909759488 B)
[2026-01-10 11:37:56] 2026-01-10 16:37:24,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:37:56] 2026-01-10 16:37:24,746 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:37:56] 2026-01-10 16:37:24,746 | INFO     | update_server=False
[2026-01-10 11:37:56] 2026-01-10 16:37:24,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:37:56] 2026-01-10 16:37:24,925 | INFO     | all payload control threads have been joined
[2026-01-10 11:37:56] 2026-01-10 16:37:24,933 | INFO     | all data control threads have been joined
[2026-01-10 11:37:56] 2026-01-10 16:37:25,043 | INFO     | all job control threads have been joined
[2026-01-10 11:37:56] 2026-01-10 16:37:25,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:37:56] 2026-01-10 16:37:25,060 | INFO     | aborting loop
[2026-01-10 11:37:56] 2026-01-10 16:37:25,751 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:25,930 | INFO     | [payload] control thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:25,939 | INFO     | [data] control thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,021 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,048 | INFO     | [job] control thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:37:56] 2026-01-10 16:37:26,066 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,580 | INFO     | [job] validate thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,628 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,661 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:26,766 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:27,065 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:27,116 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:27,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:37:56] 2026-01-10 16:37:27,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:37:56] 2026-01-10 16:37:28,065 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:28,609 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:31,507 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:37:56] 2026-01-10 16:37:35,210 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:37:56] 2026-01-10 16:37:35,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070372628288)>', '<ExcThread(monitor, started 140069746763520)>']
[2026-01-10 11:37:56] 2026-01-10 16:37:40,964 | INFO     | all workflow threads have been joined
[2026-01-10 11:37:56] 2026-01-10 16:37:40,964 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:37:56] 2026-01-10 16:37:40,964 | INFO     | traces error code: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:40,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:37:56] 2026-01-10 16:37:56,316 | INFO     | PID=2999699 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | INFO     | .. there are 11 such processes running
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:37:56] 2026-01-10 16:37:56,317 | INFO     | [monitor] control thread has ended
[2026-01-10 11:37:56] 2026-01-10 16:37:56,516 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:37:56] 2026-01-10 16:37:56,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:37:56] 2026-01-10 16:37:56,521 [wrapper] pilotpid: 2999699
[2026-01-10 11:37:56] 2026-01-10 16:37:56,524 [wrapper] Pilot exit status: 0
[2026-01-10 11:37:56] 2026-01-10 16:37:56,548 [wrapper] pandaids: 6965383416 6965383416
[2026-01-10 11:37:56] 2026-01-10 16:37:56,627 [wrapper] cleanup supervisor_pilot 3271520 2999700
[2026-01-10 11:37:56] 2026-01-10 16:37:56,631 [wrapper] Test setup, not cleaning
[2026-01-10 11:37:56] 2026-01-10 16:37:56,639 [wrapper] apfmon messages muted
[2026-01-10 11:37:56] 2026-01-10 16:37:56,642 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:37:56] 2026-01-10 16:37:56,645 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:37:56]  *** Error codes and diagnostics ***
[2026-01-10 11:37:56]     "exeErrorCode": 0,
[2026-01-10 11:37:56]     "exeErrorDiag": "",
[2026-01-10 11:37:56]     "pilotErrorCode": 0,
[2026-01-10 11:37:56]     "pilotErrorDiag": "",
[2026-01-10 11:37:56]  *** Listing of results directory ***
[2026-01-10 11:37:56] total 659388
[2026-01-10 11:37:56] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 11:37:56] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:37:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 11:37:56] -rw-r--r--. 3 boincer umatlas 225834258 Jan 10 08:13 EVNT.47898824._001444.pool.root.1
[2026-01-10 11:37:56] -rw-r--r--. 3 boincer umatlas 225834258 Jan 10 08:13 ATLAS.root_0
[2026-01-10 11:37:56] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 08:13 input.tar.gz
[2026-01-10 11:37:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:37:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:28 pandaJob.out
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas        57 Jan 10 08:28 setup.sh.local
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas    989556 Jan 10 08:29 agis_schedconf.cvmfs.json
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas 215866759 Jan 10 11:36 HITS.47898826._040556.pool.root.1
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas       531 Jan 10 11:36 boinc_task_state.xml
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas      1038 Jan 10 11:37 memory_monitor_summary.json
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas      6904 Jan 10 11:37 init_data.xml
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 11:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas    452973 Jan 10 11:37 log.47898826._040556.job.log.tgz.1
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas        96 Jan 10 11:37 pilot_heartbeat.json
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas      7789 Jan 10 11:37 heartbeat.json
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas        28 Jan 10 11:37 wrapper_checkpoint.txt
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 11:37 boinc_mmap_file
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas       823 Jan 10 11:37 pilotlog.txt
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas   1428556 Jan 10 11:37 log.47898826._040556.job.log.1
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas       357 Jan 10 11:37 output.list
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 11:37 runtime_log
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas   1904640 Jan 10 11:37 result.tar.gz
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas      9430 Jan 10 11:37 runtime_log.err
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas       783 Jan 10 11:37 jw8LDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYlmKDmR2h8dm.diag
[2026-01-10 11:37:56] -rw-r--r--. 1 boincer umatlas     23551 Jan 10 11:37 stderr.txt
[2026-01-10 11:37:56] HITS file was successfully produced:
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas 215866759 Jan 10 11:36 shared/HITS.pool.root.1
[2026-01-10 11:37:56]  *** Contents of shared directory: ***
[2026-01-10 11:37:56] total 433812
[2026-01-10 11:37:56] -rw-r--r--. 3 boincer umatlas 225834258 Jan 10 08:13 ATLAS.root_0
[2026-01-10 11:37:56] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 08:13 input.tar.gz
[2026-01-10 11:37:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas 215866759 Jan 10 11:36 HITS.pool.root.1
[2026-01-10 11:37:56] -rw-------. 1 boincer umatlas   1904640 Jan 10 11:37 result.tar.gz
11:37:58 (2991480): run_atlas exited; CPU time 46498.340241
11:37:58 (2991480): called boinc_finish(0)

</stderr_txt>
]]>

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