Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:45 (160969): wrapper (7.7.26015): starting
08:12:45 (160969): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:12:45] Arguments: --nthreads 8
[2026-01-10 08:12:45] Threads: 8
[2026-01-10 08:12:45] Checking for CVMFS
[2026-01-10 08:12:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:12:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:12:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:12:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:12:46] 2.13.3.0 10787 24077 412080 154980 0 168 17591120 32935937 28185 16776704 0 250324472 99.800 114287261 27423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:12:46] CVMFS is ok
[2026-01-10 08:12:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:12:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:12:46] Further information can be found at the LHC@home message board.
[2026-01-10 08:12:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:12:46] Checking for apptainer binary...
[2026-01-10 08:12:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:12:46] Running /usr/bin/apptainer --version
[2026-01-10 08:12:46] apptainer version 1.4.5-2.el9
[2026-01-10 08:12:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:12:46] lc-10-11.aglt2.org
[2026-01-10 08:12:46] apptainer works
[2026-01-10 08:12:46] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:12:46] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:12:46] Starting ATLAS job with PandaID=6965384176
[2026-01-10 08:12:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:10:23]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:10:23] 2026-01-10 15:09:29,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:29,656 | INFO     | time since job start (6989s) is within the limit (349056.0s)
[2026-01-10 10:10:23] 2026-01-10 15:09:31,663 | INFO     | time since job start (6991s) is within the limit (349056.0s)
[2026-01-10 10:10:23] 2026-01-10 15:09:31,905 | INFO     | monitor loop #349: job 0:6965384176 is in state 'finished'
[2026-01-10 10:10:23] 2026-01-10 15:09:31,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:34,418 | INFO     | monitor loop #350: job 0:6965384176 is in state 'finished'
[2026-01-10 10:10:23] 2026-01-10 15:09:34,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:37,090 | INFO     | monitor loop #351: job 0:6965384176 is in state 'finished'
[2026-01-10 10:10:23] 2026-01-10 15:09:37,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:38,508 | INFO     | PID=183745 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:10:23] 2026-01-10 15:09:38,508 | INFO     | .. there are 48 such processes running
[2026-01-10 10:10:23] 2026-01-10 15:09:39,509 | INFO     | time since job start (6999s) is within the limit (349056.0s)
[2026-01-10 10:10:23] 2026-01-10 15:09:39,634 | INFO     | monitor loop #352: job 0:6965384176 is in state 'finished'
[2026-01-10 10:10:23] 2026-01-10 15:09:39,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:41,522 | INFO     | time since job start (7001s) is within the limit (349056.0s)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,144 | INFO     | monitor loop #353: job 0:6965384176 is in state 'finished'
[2026-01-10 10:10:23] 2026-01-10 15:09:42,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,566 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:10:23] 2026-01-10 15:09:42,576 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2711.9853333333326
[2026-01-10 10:10:23] 2026-01-10 15:09:42,613 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384176/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,614 | INFO     | extracted standard info from prmon json
[2026-01-10 10:10:23] 2026-01-10 15:09:42,615 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:10:23] 2026-01-10 15:09:42,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:10:23] 2026-01-10 15:09:42,621 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:10:23] 2026-01-10 15:09:42,621 | INFO     | sum of square deviations: 459010050.4912284
[2026-01-10 10:10:23] 2026-01-10 15:09:42,622 | INFO     | sum of deviations: -101968325141.45613
[2026-01-10 10:10:23] 2026-01-10 15:09:42,622 | INFO     | mean x: 1768054263.491228
[2026-01-10 10:10:23] 2026-01-10 15:09:42,626 | INFO     | mean y: 2219605.043859649
[2026-01-10 10:10:23] 2026-01-10 15:09:42,627 | INFO     | intersect: 392772556146.6324
[2026-01-10 10:10:23] 2026-01-10 15:09:42,627 | INFO     | chi2: 13.254631988019495
[2026-01-10 10:10:23] 2026-01-10 15:09:42,627 | INFO     | sum of square deviations: 401280366.2018349
[2026-01-10 10:10:23] 2026-01-10 15:09:42,628 | INFO     | sum of deviations: -73363112640.30276
[2026-01-10 10:10:23] 2026-01-10 15:09:42,628 | INFO     | mean x: 1768054111.1284404
[2026-01-10 10:10:23] 2026-01-10 15:09:42,628 | INFO     | mean y: 2295288.8073394494
[2026-01-10 10:10:23] 2026-01-10 15:09:42,628 | INFO     | intersect: 323242512936.5977
[2026-01-10 10:10:23] 2026-01-10 15:09:42,632 | INFO     | chi2: 10.548674194270983
[2026-01-10 10:10:23] 2026-01-10 15:09:42,633 | INFO     | current chi2=10.548674194270983 (change=20.415186149222055 %)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,633 | INFO     | right removable region: 108
[2026-01-10 10:10:23] 2026-01-10 15:09:42,633 | INFO     | sum of square deviations: 401079071.44954115
[2026-01-10 10:10:23] 2026-01-10 15:09:42,633 | INFO     | sum of deviations: -119848172378.47705
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | mean x: 1768054416.119266
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | mean y: 2265764.0366972475
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | intersect: 528322254318.333
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | chi2: 10.531738695947729
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | current chi2=10.531738695947729 (change=20.542956564413988 %)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | left removable region: 10
[2026-01-10 10:10:23] 2026-01-10 15:09:42,634 | INFO     | sum of square deviations: 291440370.5306116
[2026-01-10 10:10:23] 2026-01-10 15:09:42,635 | INFO     | sum of deviations: -81724347833.2653
[2026-01-10 10:10:23] 2026-01-10 15:09:42,635 | INFO     | mean x: 1768054385.877551
[2026-01-10 10:10:23] 2026-01-10 15:09:42,635 | INFO     | mean y: 2355911.56122449
[2026-01-10 10:10:23] 2026-01-10 15:09:42,635 | INFO     | intersect: 495791910929.3358
[2026-01-10 10:10:23] 2026-01-10 15:09:42,635 | INFO     | chi2: 7.178373103021516
[2026-01-10 10:10:23] 2026-01-10 15:09:42,636 | INFO     | current memory leak: -280.42 B/s (using 98 data points, chi2=7.18)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,636 | INFO     | could have reported an average CPU frequency of 2718 MHz (7 samples)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,637 | INFO     | ..............................
[2026-01-10 10:10:23] 2026-01-10 15:09:42,637 | INFO     | . Timing measurements:
[2026-01-10 10:10:23] 2026-01-10 15:09:42,637 | INFO     | . get job = 0 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,637 | INFO     | . initial setup = 2 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,637 | INFO     | . payload setup = 9 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,638 | INFO     | . stage-in = 0 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,638 | INFO     | . payload execution = 6918 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,638 | INFO     | . stage-out = 5 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,638 | INFO     | . log creation = 2 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,638 | INFO     | ..............................
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | 
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | job summary report
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | --------------------------------------------------
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | PanDA job id: 6965384176
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | task id: 47962010
[2026-01-10 10:10:23] 2026-01-10 15:09:42,839 | INFO     | errors: (none)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | pilot state: finished 
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | transexitcode: 0
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | exeerrorcode: 0
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | exeerrordiag: 
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | exitcode: 0
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | exitmsg: OK
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | cpuconsumptiontime: 14425 s
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | nevents: 50
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | neventsw: 0
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | pid: 222878
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | pgrp: 222878
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | corecount: 8
[2026-01-10 10:10:23] 2026-01-10 15:09:42,840 | INFO     | event service: False
[2026-01-10 10:10:23] 2026-01-10 15:09:42,841 | INFO     | sizes: {0: 2284455, 1: 2284597, 6: 2284859, 11: 2284887, 6935: 2312651, 6936: 2312650, 6943: 2321828, 6946: 2321884, 6984: 2322130}
[2026-01-10 10:10:23] 2026-01-10 15:09:42,841 | INFO     | --------------------------------------------------
[2026-01-10 10:10:23] 2026-01-10 15:09:42,841 | INFO     | 
[2026-01-10 10:10:23] 2026-01-10 15:09:42,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 10:10:23] 2026-01-10 15:09:42,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:10:23] 2026-01-10 15:09:42,999 | INFO     | job 6965384176 has completed (purged errors)
[2026-01-10 10:10:23] 2026-01-10 15:09:42,999 | INFO     | overall cleanup function is called
[2026-01-10 10:10:23] 2026-01-10 15:09:44,031 | INFO     | --- collectZombieJob: --- 10, [222878]
[2026-01-10 10:10:23] 2026-01-10 15:09:44,032 | INFO     | zombie collector waiting for pid 222878
[2026-01-10 10:10:23] 2026-01-10 15:09:44,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:10:23] 2026-01-10 15:09:44,032 | INFO     | collected zombie processes
[2026-01-10 10:10:23] 2026-01-10 15:09:44,032 | INFO     | will attempt to kill all subprocesses of pid=222878
[2026-01-10 10:10:23] 2026-01-10 15:09:46,170 | INFO     | process IDs to be killed: [222878] (in reverse order)
[2026-01-10 10:10:23] 2026-01-10 15:09:46,531 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:10:23] 2026-01-10 15:09:46,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:10:23] 2026-01-10 15:09:46,679 | INFO     | did not find any defunct processes belonging to 222878
[2026-01-10 10:10:23] 2026-01-10 15:09:46,871 | INFO     | did not find any defunct processes belonging to 222878
[2026-01-10 10:10:23] 2026-01-10 15:09:46,871 | INFO     | ready for new job
[2026-01-10 10:10:23] 2026-01-10 15:09:46,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:10:23] 2026-01-10 15:09:46,884 | INFO     | ***************************************
[2026-01-10 10:10:23] 2026-01-10 15:09:46,885 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:10:23] 2026-01-10 15:09:46,885 | INFO     | ***************************************
[2026-01-10 10:10:23] 2026-01-10 15:09:46,885 | INFO     | 
[2026-01-10 10:10:23] 2026-01-10 15:09:46,930 | INFO     | architecture information:
[2026-01-10 10:10:23] 2026-01-10 15:09:46,942 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:10:23] 2026-01-10 15:09:47,057 | INFO     | cat /etc/os-release:
[2026-01-10 10:10:23] NAME="CentOS Linux"
[2026-01-10 10:10:23] VERSION="7 (Core)"
[2026-01-10 10:10:23] ID="centos"
[2026-01-10 10:10:23] ID_LIKE="rhel fedora"
[2026-01-10 10:10:23] VERSION_ID="7"
[2026-01-10 10:10:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:10:23] ANSI_COLOR="0;31"
[2026-01-10 10:10:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:10:23] HOME_URL="https://www.centos.org/"
[2026-01-10 10:10:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:10:23] 
[2026-01-10 10:10:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:10:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:10:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:10:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:10:23] 
[2026-01-10 10:10:23] 2026-01-10 15:09:47,057 | INFO     | ***************************************
[2026-01-10 10:10:23] 2026-01-10 15:09:47,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 10:10:23] 2026-01-10 15:09:47,682 | INFO     | sufficient remaining disk space (93081042944 B)
[2026-01-10 10:10:23] 2026-01-10 15:09:47,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:10:23] 2026-01-10 15:09:47,682 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:10:23] 2026-01-10 15:09:47,682 | INFO     | update_server=False
[2026-01-10 10:10:23] 2026-01-10 15:09:47,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:10:23] 2026-01-10 15:09:47,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:10:23] 2026-01-10 15:09:47,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:10:23] 2026-01-10 15:09:48,121 | INFO     | all data control threads have been joined
[2026-01-10 10:10:23] 2026-01-10 15:09:48,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:10:23] 2026-01-10 15:09:48,180 | INFO     | aborting loop
[2026-01-10 10:10:23] 2026-01-10 15:09:48,526 | INFO     | all payload control threads have been joined
[2026-01-10 10:10:23] 2026-01-10 15:09:48,601 | INFO     | all job control threads have been joined
[2026-01-10 10:10:23] 2026-01-10 15:09:48,689 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:48,746 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:48,953 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,108 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,128 | INFO     | [data] control thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,185 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,294 | INFO     | [job] validate thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,298 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,532 | INFO     | [payload] control thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,629 | INFO     | [job] control thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,698 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,717 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,782 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:49,786 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:09:51,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:10:23] 2026-01-10 15:09:55,049 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:10:23] 2026-01-10 15:10:12,912 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:10:23] 2026-01-10 15:10:13,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029424691008)>', '<ExcThread(monitor, started 140029053613824)>']
[2026-01-10 10:10:23] 2026-01-10 15:10:18,555 | INFO     | all workflow threads have been joined
[2026-01-10 10:10:23] 2026-01-10 15:10:18,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:10:23] 2026-01-10 15:10:18,558 | INFO     | traces error code: 0
[2026-01-10 10:10:23] 2026-01-10 15:10:18,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:10:23] 2026-01-10 15:10:20,115 | INFO     | PID=183745 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | INFO     | .. there are 48 such processes running
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:10:23] 2026-01-10 15:10:20,116 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 10:10:23] 2026-01-10 15:10:20,117 | INFO     | [monitor] control thread has ended
[2026-01-10 10:10:23] 2026-01-10 15:10:22,198 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:10:23] 2026-01-10 15:10:22,218 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:10:23] 2026-01-10 15:10:22,274 [wrapper] pilotpid: 183745
[2026-01-10 10:10:23] 2026-01-10 15:10:22,288 [wrapper] Pilot exit status: 0
[2026-01-10 10:10:23] 2026-01-10 15:10:22,398 [wrapper] pandaids: 6965384176
[2026-01-10 10:10:23] 2026-01-10 15:10:22,679 [wrapper] cleanup supervisor_pilot 2349717 183746
[2026-01-10 10:10:23] 2026-01-10 15:10:22,697 [wrapper] Test setup, not cleaning
[2026-01-10 10:10:23] 2026-01-10 15:10:22,725 [wrapper] apfmon messages muted
[2026-01-10 10:10:23] 2026-01-10 15:10:22,744 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:10:23] 2026-01-10 15:10:22,765 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:10:23]  *** Error codes and diagnostics ***
[2026-01-10 10:10:23]     "exeErrorCode": 0,
[2026-01-10 10:10:23]     "exeErrorDiag": "",
[2026-01-10 10:10:23]     "pilotErrorCode": 0,
[2026-01-10 10:10:23]     "pilotErrorDiag": "",
[2026-01-10 10:10:23]  *** Listing of results directory ***
[2026-01-10 10:10:23] total 427748
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 10:10:23] -rwx------. 1 boincer umatlas     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:10:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:12 run_atlas
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:12 job.xml
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:12 EVNT.47962006._000088.pool.root.1
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 10:10:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:12 shared
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:12 input.tar.gz
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:12 boinc_lockfile
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:12 pandaJob.out
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas        57 Jan 10 08:12 setup.sh.local
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas    989556 Jan 10 08:12 agis_schedconf.cvmfs.json
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:10:23] drwx------. 5 boincer umatlas      4096 Jan 10 08:13 pilot3
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:35 boinc_task_state.xml
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas  37721691 Jan 10 10:08 HITS.47962010._002317.pool.root.1
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas      1045 Jan 10 10:08 memory_monitor_summary.json
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas   1219574 Jan 10 10:08 log.47962010._002317.job.log.tgz.1
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas        95 Jan 10 10:09 pilot_heartbeat.json
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas      8571 Jan 10 10:09 heartbeat.json
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas      6865 Jan 10 10:09 init_data.xml
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas       892 Jan 10 10:10 pilotlog.txt
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:10 wrapper_checkpoint.txt
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:10 boinc_mmap_file
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas    808801 Jan 10 10:10 log.47962010._002317.job.log.1
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas       353 Jan 10 10:10 output.list
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:10 runtime_log
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas   2048000 Jan 10 10:10 result.tar.gz
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 10:10 runtime_log.err
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas       653 Jan 10 10:10 NIwMDmLvny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqVhKDm0coGFo.diag
[2026-01-10 10:10:23] -rw-r--r--. 1 boincer umatlas     21722 Jan 10 10:10 stderr.txt
[2026-01-10 10:10:23] HITS file was successfully produced:
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas 37721691 Jan 10 10:08 shared/HITS.pool.root.1
[2026-01-10 10:10:23]  *** Contents of shared directory: ***
[2026-01-10 10:10:23] total 422568
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:12 ATLAS.root_0
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 10:10:23] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:12 input.tar.gz
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas  37721691 Jan 10 10:08 HITS.pool.root.1
[2026-01-10 10:10:23] -rw-------. 1 boincer umatlas   2048000 Jan 10 10:10 result.tar.gz
10:10:25 (160969): run_atlas exited; CPU time 14699.972434
10:10:25 (160969): called boinc_finish(0)

</stderr_txt>
]]>

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