Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:09 (2510188): wrapper (7.7.26015): starting
08:12:09 (2510188): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:12:09] Arguments: --nthreads 10
[2026-01-10 08:12:09] Threads: 10
[2026-01-10 08:12:09] Checking for CVMFS
[2026-01-10 08:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:12:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:12:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:12:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:12:10] 2.13.3.0 11323 94894 323720 154980 0 167 21898452 32935936 16675 16776704 0 315793859 99.421 492755160 39916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:12:10] CVMFS is ok
[2026-01-10 08:12:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:12:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:12:10] Further information can be found at the LHC@home message board.
[2026-01-10 08:12:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:12:10] Checking for apptainer binary...
[2026-01-10 08:12:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:12:10] Running /usr/bin/apptainer --version
[2026-01-10 08:12:10] apptainer version 1.4.5-2.el9
[2026-01-10 08:12:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:12:11] c6-4-5-3.aglt2.org
[2026-01-10 08:12:11] apptainer works
[2026-01-10 08:12:11] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:12:11] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:12:11] Starting ATLAS job with PandaID=6965382626
[2026-01-10 08:12:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:41:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:41:17] 2026-01-10 19:40:15,400 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3058.56815625
[2026-01-10 14:41:17] 2026-01-10 19:40:15,510 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965382626/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,511 | INFO     | extracted standard info from prmon json
[2026-01-10 14:41:17] 2026-01-10 19:40:15,511 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:41:17] 2026-01-10 19:40:15,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:41:17] 2026-01-10 19:40:15,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:41:17] 2026-01-10 19:40:15,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:41:17] 2026-01-10 19:40:15,525 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:41:17] 2026-01-10 19:40:15,526 | INFO     | sum of square deviations: 16615193432.23348
[2026-01-10 14:41:17] 2026-01-10 19:40:15,533 | INFO     | sum of deviations: -108844810556.3342
[2026-01-10 14:41:17] 2026-01-10 19:40:15,533 | INFO     | mean x: 1768062455.5066314
[2026-01-10 14:41:17] 2026-01-10 19:40:15,533 | INFO     | mean y: 2647399.933687003
[2026-01-10 14:41:17] 2026-01-10 19:40:15,533 | INFO     | intersect: 11585083909.402431
[2026-01-10 14:41:17] 2026-01-10 19:40:15,534 | INFO     | chi2: 4.312342656081412
[2026-01-10 14:41:17] 2026-01-10 19:40:15,534 | INFO     | sum of square deviations: 15962858820.975822
[2026-01-10 14:41:17] 2026-01-10 19:40:15,541 | INFO     | sum of deviations: -57032072537.258064
[2026-01-10 14:41:17] 2026-01-10 19:40:15,542 | INFO     | mean x: 1768062303.0080645
[2026-01-10 14:41:17] 2026-01-10 19:40:15,542 | INFO     | mean y: 2659419.0860215053
[2026-01-10 14:41:17] 2026-01-10 19:40:15,542 | INFO     | intersect: 6319589152.439591
[2026-01-10 14:41:17] 2026-01-10 19:40:15,542 | INFO     | chi2: 2.939321675956298
[2026-01-10 14:41:17] 2026-01-10 19:40:15,542 | INFO     | current chi2=2.939321675956298 (change=31.839329330400805 %)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,550 | INFO     | sum of square deviations: 15327826859.7166
[2026-01-10 14:41:17] 2026-01-10 19:40:15,553 | INFO     | sum of deviations: -55702047648.75479
[2026-01-10 14:41:17] 2026-01-10 19:40:15,553 | INFO     | mean x: 1768062150.5095367
[2026-01-10 14:41:17] 2026-01-10 19:40:15,553 | INFO     | mean y: 2659738.501362398
[2026-01-10 14:41:17] 2026-01-10 19:40:15,553 | INFO     | intersect: 6427881203.683217
[2026-01-10 14:41:17] 2026-01-10 19:40:15,554 | INFO     | chi2: 2.938197408262202
[2026-01-10 14:41:17] 2026-01-10 19:40:15,554 | INFO     | current chi2=2.938197408262202 (change=0.03824922271327617 %)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,554 | INFO     | right removable region: 366
[2026-01-10 14:41:17] 2026-01-10 19:40:15,559 | INFO     | sum of square deviations: 15962788060.932745
[2026-01-10 14:41:17] 2026-01-10 19:40:15,562 | INFO     | sum of deviations: -198345857505.1506
[2026-01-10 14:41:17] 2026-01-10 19:40:15,562 | INFO     | mean x: 1768062608.0134408
[2026-01-10 14:41:17] 2026-01-10 19:40:15,562 | INFO     | mean y: 2668249.430107527
[2026-01-10 14:41:17] 2026-01-10 19:40:15,562 | INFO     | intersect: 21971756153.78504
[2026-01-10 14:41:17] 2026-01-10 19:40:15,567 | INFO     | chi2: 2.0832099052121853
[2026-01-10 14:41:17] 2026-01-10 19:40:15,567 | INFO     | current chi2=2.0832099052121853 (change=51.69192081073679 %)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,567 | INFO     | sum of square deviations: 15327753049.694777
[2026-01-10 14:41:17] 2026-01-10 19:40:15,570 | INFO     | sum of deviations: -214223258935.39777
[2026-01-10 14:41:17] 2026-01-10 19:40:15,571 | INFO     | mean x: 1768062760.5122616
[2026-01-10 14:41:17] 2026-01-10 19:40:15,575 | INFO     | mean y: 2672046.310626703
[2026-01-10 14:41:17] 2026-01-10 19:40:15,575 | INFO     | intersect: 24713415058.104824
[2026-01-10 14:41:17] 2026-01-10 19:40:15,575 | INFO     | chi2: 1.959225273961378
[2026-01-10 14:41:17] 2026-01-10 19:40:15,576 | INFO     | current chi2=1.959225273961378 (change=5.951614906428683 %)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,576 | INFO     | left removable region: 20
[2026-01-10 14:41:17] 2026-01-10 19:40:15,576 | INFO     | sum of square deviations: 12844275568.858376
[2026-01-10 14:41:17] 2026-01-10 19:40:15,583 | INFO     | sum of deviations: -136157662713.01442
[2026-01-10 14:41:17] 2026-01-10 19:40:15,583 | INFO     | mean x: 1768062730.0202312
[2026-01-10 14:41:17] 2026-01-10 19:40:15,583 | INFO     | mean y: 2679382.4306358383
[2026-01-10 14:41:17] 2026-01-10 19:40:15,583 | INFO     | intersect: 18745292584.628006
[2026-01-10 14:41:17] 2026-01-10 19:40:15,584 | INFO     | chi2: 0.5032468459020798
[2026-01-10 14:41:17] 2026-01-10 19:40:15,584 | INFO     | current memory leak: -10.60 B/s (using 346 data points, chi2=0.50)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,584 | INFO     | could have reported an average CPU frequency of 3031 MHz (16 samples)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | ..............................
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . Timing measurements:
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . get job = 0 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . initial setup = 5 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . payload setup = 48 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . stage-in = 0 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . payload execution = 23002 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . stage-out = 7 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | . log creation = 0 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,585 | INFO     | ..............................
[2026-01-10 14:41:17] 2026-01-10 19:40:15,862 | INFO     | 
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | job summary report
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | --------------------------------------------------
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | PanDA job id: 6965382626
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | task id: 47898826
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | errors: (none)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:41:17] 2026-01-10 19:40:15,863 | INFO     | pilot state: finished 
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | transexitcode: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | exeerrorcode: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | exeerrordiag: 
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | exitcode: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | exitmsg: OK
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | cpuconsumptiontime: 56551 s
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | nevents: 400
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | neventsw: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | pid: 2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | pgrp: 2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | corecount: 10
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | event service: False
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | sizes: {0: 2283090, 1: 2283775, 2: 2283803, 3: 2284002, 15: 2284002, 26: 2284030, 36: 2284186, 39: 2284476, 47: 2284504, 23054: 2319211, 23055: 2319210, 23063: 232
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | --------------------------------------------------
[2026-01-10 14:41:17] 2026-01-10 19:40:15,864 | INFO     | 
[2026-01-10 14:41:17] 2026-01-10 19:40:15,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 14:41:17] 2026-01-10 19:40:15,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | job 6965382626 has completed (purged errors)
[2026-01-10 14:41:17] 2026-01-10 19:40:15,924 | INFO     | overall cleanup function is called
[2026-01-10 14:41:17] 2026-01-10 19:40:15,923 | INFO     | time since job start (23194s) is within the limit (349056.0s)
[2026-01-10 14:41:17] 2026-01-10 19:40:16,951 | INFO     | --- collectZombieJob: --- 10, [2553450]
[2026-01-10 14:41:17] 2026-01-10 19:40:16,951 | INFO     | zombie collector waiting for pid 2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:16,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:41:17] 2026-01-10 19:40:16,951 | INFO     | collected zombie processes
[2026-01-10 14:41:17] 2026-01-10 19:40:16,951 | INFO     | will attempt to kill all subprocesses of pid=2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:20,471 | INFO     | PID=2535128 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:41:17] 2026-01-10 19:40:20,471 | INFO     | .. there are 23 such processes running
[2026-01-10 14:41:17] 2026-01-10 19:40:20,702 | INFO     | process IDs to be killed: [2553450] (in reverse order)
[2026-01-10 14:41:17] 2026-01-10 19:40:21,760 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:41:17] 2026-01-10 19:40:21,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:41:17] 2026-01-10 19:40:21,781 | INFO     | did not find any defunct processes belonging to 2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:21,808 | INFO     | did not find any defunct processes belonging to 2553450
[2026-01-10 14:41:17] 2026-01-10 19:40:21,812 | INFO     | ready for new job
[2026-01-10 14:41:17] 2026-01-10 19:40:21,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:41:17] 2026-01-10 19:40:21,814 | INFO     | ***************************************
[2026-01-10 14:41:17] 2026-01-10 19:40:21,815 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:41:17] 2026-01-10 19:40:21,815 | INFO     | ***************************************
[2026-01-10 14:41:17] 2026-01-10 19:40:21,815 | INFO     | 
[2026-01-10 14:41:17] 2026-01-10 19:40:21,822 | INFO     | architecture information:
[2026-01-10 14:41:17] 2026-01-10 19:40:21,826 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:41:17] 2026-01-10 19:40:21,924 | INFO     | cat /etc/os-release:
[2026-01-10 14:41:17] NAME="CentOS Linux"
[2026-01-10 14:41:17] VERSION="7 (Core)"
[2026-01-10 14:41:17] ID="centos"
[2026-01-10 14:41:17] ID_LIKE="rhel fedora"
[2026-01-10 14:41:17] VERSION_ID="7"
[2026-01-10 14:41:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:41:17] ANSI_COLOR="0;31"
[2026-01-10 14:41:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:41:17] HOME_URL="https://www.centos.org/"
[2026-01-10 14:41:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:41:17] 
[2026-01-10 14:41:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:41:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:41:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:41:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:41:17] 
[2026-01-10 14:41:17] 2026-01-10 19:40:21,924 | INFO     | ***************************************
[2026-01-10 14:41:17] 2026-01-10 19:40:22,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 14:41:17] 2026-01-10 19:40:22,540 | INFO     | sufficient remaining disk space (74405904384 B)
[2026-01-10 14:41:17] 2026-01-10 19:40:22,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:41:17] 2026-01-10 19:40:22,541 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:41:17] 2026-01-10 19:40:22,541 | INFO     | update_server=False
[2026-01-10 14:41:17] 2026-01-10 19:40:22,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:41:17] 2026-01-10 19:40:22,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:41:17] 2026-01-10 19:40:22,551 | INFO     | aborting loop
[2026-01-10 14:41:17] 2026-01-10 19:40:22,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:41:17] 2026-01-10 19:40:23,323 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:41:17] 2026-01-10 19:40:23,407 | INFO     | all job control threads have been joined
[2026-01-10 14:41:17] 2026-01-10 19:40:23,547 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:23,557 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:23,605 | INFO     | all data control threads have been joined
[2026-01-10 14:41:17] 2026-01-10 19:40:23,605 | INFO     | all payload control threads have been joined
[2026-01-10 14:41:17] 2026-01-10 19:40:23,877 | INFO     | [job] validate thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:23,910 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,414 | INFO     | [job] control thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,497 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:41:17] 2026-01-10 19:40:24,596 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,611 | INFO     | [data] control thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,611 | INFO     | [payload] control thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,636 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,878 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:24,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:41:17] 2026-01-10 19:40:24,975 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:25,108 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:25,917 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:28,515 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:41:17] 2026-01-10 19:40:28,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625052587840)>', '<ExcThread(monitor, started 140624317630208)>']
[2026-01-10 14:41:17] 2026-01-10 19:40:33,581 | INFO     | all workflow threads have been joined
[2026-01-10 14:41:17] 2026-01-10 19:40:33,581 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:41:17] 2026-01-10 19:40:33,581 | INFO     | traces error code: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:33,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:41:17] 2026-01-10 19:40:55,416 | INFO     | PID=2535128 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:41:17] 2026-01-10 19:40:55,416 | INFO     | .. there are 23 such processes running
[2026-01-10 14:41:17] 2026-01-10 19:40:55,417 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:41:17] 2026-01-10 19:40:55,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:41:17] 2026-01-10 19:40:55,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:41:17] 2026-01-10 19:40:55,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:41:17] 2026-01-10 19:40:55,418 | INFO     | [monitor] control thread has ended
[2026-01-10 14:41:17] 2026-01-10 19:40:56,840 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:41:17] 2026-01-10 19:40:56,875 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:41:17] 2026-01-10 19:40:56,930 [wrapper] pilotpid: 2535128
[2026-01-10 14:41:17] 2026-01-10 19:40:56,984 [wrapper] Pilot exit status: 0
[2026-01-10 14:41:17] 2026-01-10 19:40:57,153 [wrapper] pandaids: 6965382626
[2026-01-10 14:41:17] 2026-01-10 19:40:57,350 [wrapper] cleanup supervisor_pilot 3970023 2535129
[2026-01-10 14:41:17] 2026-01-10 19:40:57,369 [wrapper] Test setup, not cleaning
[2026-01-10 14:41:17] 2026-01-10 19:40:57,469 [wrapper] apfmon messages muted
[2026-01-10 14:41:17] 2026-01-10 19:40:57,497 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:41:17] 2026-01-10 19:40:57,536 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:41:17]  *** Error codes and diagnostics ***
[2026-01-10 14:41:18]     "exeErrorCode": 0,
[2026-01-10 14:41:18]     "exeErrorDiag": "",
[2026-01-10 14:41:18]     "pilotErrorCode": 0,
[2026-01-10 14:41:18]     "pilotErrorDiag": "",
[2026-01-10 14:41:18]  *** Listing of results directory ***
[2026-01-10 14:41:18] total 448536
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 14:41:18] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:41:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:12 run_atlas
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:12 job.xml
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas 223737935 Jan 10 08:12 EVNT.47898824._000842.pool.root.1
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas    592405 Jan 10 08:12 input.tar.gz
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 14:41:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:12 shared
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:12 boinc_lockfile
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 08:12 pandaJob.out
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas        57 Jan 10 08:12 setup.sh.local
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas    989556 Jan 10 08:13 agis_schedconf.cvmfs.json
[2026-01-10 14:41:18] drwx------. 5 boincer umatlas      4096 Jan 10 08:13 pilot3
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas 224685192 Jan 10 14:37 HITS.47898826._040202.pool.root.1
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 14:37 init_data.xml
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas       530 Jan 10 14:37 boinc_task_state.xml
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas      1041 Jan 10 14:39 memory_monitor_summary.json
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas    593640 Jan 10 14:39 log.47898826._040202.job.log.tgz.1
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas      7821 Jan 10 14:40 heartbeat.json
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas        95 Jan 10 14:40 pilot_heartbeat.json
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas       823 Jan 10 14:40 pilotlog.txt
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:40 boinc_mmap_file
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas        28 Jan 10 14:40 wrapper_checkpoint.txt
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas   2891395 Jan 10 14:40 log.47898826._040202.job.log.1
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas       357 Jan 10 14:40 output.list
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:40 runtime_log
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas   3502080 Jan 10 14:40 result.tar.gz
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 14:40 runtime_log.err
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas       657 Jan 10 14:40 9FqMDmTuny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdjmKDmvuDVen.diag
[2026-01-10 14:41:18] -rw-r--r--. 1 boincer umatlas     21336 Jan 10 14:41 stderr.txt
[2026-01-10 14:41:18] HITS file was successfully produced:
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas 224685192 Jan 10 14:37 shared/HITS.pool.root.1
[2026-01-10 14:41:18]  *** Contents of shared directory: ***
[2026-01-10 14:41:18] total 441940
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas 223737935 Jan 10 08:12 ATLAS.root_0
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas    592405 Jan 10 08:12 input.tar.gz
[2026-01-10 14:41:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas 224685192 Jan 10 14:37 HITS.pool.root.1
[2026-01-10 14:41:18] -rw-------. 1 boincer umatlas   3502080 Jan 10 14:40 result.tar.gz
14:41:19 (2510188): run_atlas exited; CPU time 57298.105844
14:41:19 (2510188): called boinc_finish(0)

</stderr_txt>
]]>

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