Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:12 (8686): wrapper (7.7.26015): starting
08:12:12 (8686): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:12:12] Arguments: --nthreads 11
[2026-01-10 08:12:12] Threads: 11
[2026-01-10 08:12:12] Checking for CVMFS
[2026-01-10 08:12:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:12:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:12:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:12:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:12:13] 2.13.3.0 11585 24362 156924 154980 3 406 22595540 40960000 17992 16776704 0 42071301 99.750 26497863 36866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:12:13] CVMFS is ok
[2026-01-10 08:12:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:12:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:12:13] Further information can be found at the LHC@home message board.
[2026-01-10 08:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:12:13] Checking for apptainer binary...
[2026-01-10 08:12:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:12:13] Running /usr/bin/apptainer --version
[2026-01-10 08:12:13] apptainer version 1.4.5-2.el9
[2026-01-10 08:12:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:12:14] c-212-9.aglt2.org
[2026-01-10 08:12:14] apptainer works
[2026-01-10 08:12:14] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:12:14] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:12:14] Starting ATLAS job with PandaID=6965384193
[2026-01-10 08:12:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:22:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:22:52]  storage_token=
[2026-01-10 09:22:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965384193/log.47962010._002334.job.log.tgz.1
[2026-01-10 09:22:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/6d/86/log.47962010._002334.job.log.tgz.1
[2026-01-10 09:22:52]  workdir=None
[2026-01-10 09:22:52] ]
[2026-01-10 09:22:52] 2026-01-10 14:21:55,595 | INFO     | transferring file log.47962010._002334.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384193/log.47962010._002334.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:22:52] 2026-01-10 14:21:55,595 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384193/log.47962010._002334.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002334.job
[2026-01-10 09:22:52] 2026-01-10 14:21:55,628 | INFO     | adding to output.list: log.47962010._002334.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/6d/86/log.47962010._002334.job.log.tgz.
[2026-01-10 09:22:52] 2026-01-10 14:21:55,628 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:22:52] 2026-01-10 14:21:55,629 | INFO     | summary of transferred files:
[2026-01-10 09:22:52] 2026-01-10 14:21:55,629 | INFO     |  -- lfn=log.47962010._002334.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:22:52] 2026-01-10 14:21:55,629 | INFO     | stage-out finished correctly
[2026-01-10 09:22:52] 2026-01-10 14:21:56,193 | INFO     | time since job start (4156s) is within the limit (349056.0s)
[2026-01-10 09:22:52] 2026-01-10 14:21:57,655 | WARNING  | process 30396 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:22:52] 2026-01-10 14:21:57,657 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384193/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:22:52] 2026-01-10 14:21:57,911 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:22:52] 2026-01-10 14:21:58,047 | INFO     | number of running child processes to parent process 30396: 1
[2026-01-10 09:22:52] 2026-01-10 14:21:58,047 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:22:52] 2026-01-10 14:21:58,198 | INFO     | time since job start (4158s) is within the limit (349056.0s)
[2026-01-10 09:22:52] 2026-01-10 14:21:59,994 | INFO     | job 6965384193 has state=finished
[2026-01-10 09:22:52] 2026-01-10 14:21:59,994 | INFO     | preparing for final server update for job 6965384193 in state='finished'
[2026-01-10 09:22:52] 2026-01-10 14:22:00,051 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 09:22:52] 2026-01-10 14:22:00,055 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:22:52] 2026-01-10 14:22:00,055 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:22:52] 2026-01-10 14:22:00,055 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:22:52] 2026-01-10 14:22:00,055 | INFO     | job 6965384193 has finished - writing final server update
[2026-01-10 09:22:52] 2026-01-10 14:22:00,055 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:22:52] 2026-01-10 14:22:00,056 | INFO     | executing command: lscpu
[2026-01-10 09:22:52] 2026-01-10 14:22:00,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:22:52] 2026-01-10 14:22:00,209 | INFO     | time since job start (4160s) is within the limit (349056.0s)
[2026-01-10 09:22:52] 2026-01-10 14:22:00,550 | INFO     | monitor loop #277: job 0:6965384193 is in state 'finished'
[2026-01-10 09:22:52] 2026-01-10 14:22:00,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:22:52] 2026-01-10 14:22:02,216 | INFO     | time since job start (4162s) is within the limit (349056.0s)
[2026-01-10 09:22:52] 2026-01-10 14:22:03,054 | INFO     | monitor loop #278: job 0:6965384193 is in state 'finished'
[2026-01-10 09:22:52] 2026-01-10 14:22:03,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:22:52] 2026-01-10 14:22:04,223 | INFO     | time since job start (4164s) is within the limit (349056.0s)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,272 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:22:52] 2026-01-10 14:22:05,323 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3231.440333333332
[2026-01-10 09:22:52] 2026-01-10 14:22:05,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384193/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,371 | INFO     | extracted standard info from prmon json
[2026-01-10 09:22:52] 2026-01-10 14:22:05,371 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:22:52] 2026-01-10 14:22:05,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | sum of square deviations: 70331794.19672137
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | sum of deviations: 103148318.00000048
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | mean x: 1768052937.1147542
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | mean y: 2942183.0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | intersect: -2590076929.9241667
[2026-01-10 09:22:52] 2026-01-10 14:22:05,373 | INFO     | chi2: 0.5155989411654194
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | current memory leak: 1.47 B/s (using 61 data points, chi2=0.52)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | could have reported an average CPU frequency of 3178 MHz (6 samples)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | ..............................
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . Timing measurements:
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . get job = 0 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . initial setup = 2 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . payload setup = 10 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . stage-in = 0 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . payload execution = 4121 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . stage-out = 1 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | . log creation = 0 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,374 | INFO     | ..............................
[2026-01-10 09:22:52] 2026-01-10 14:22:05,476 | INFO     | 
[2026-01-10 09:22:52] 2026-01-10 14:22:05,476 | INFO     | job summary report
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | --------------------------------------------------
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | PanDA job id: 6965384193
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | task id: 47962010
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | errors: (none)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | pilot state: finished 
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | transexitcode: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | exeerrorcode: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | exeerrordiag: 
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | exitcode: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | exitmsg: OK
[2026-01-10 09:22:52] 2026-01-10 14:22:05,477 | INFO     | cpuconsumptiontime: 11553 s
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | nevents: 50
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | neventsw: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | pid: 30396
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | pgrp: 30396
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | corecount: 11
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | event service: False
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | sizes: {0: 2284340, 1: 2284595, 11: 2284857, 12: 2284885, 4135: 2311819, 4136: 2320813, 4138: 2320997, 4146: 2321243}
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | --------------------------------------------------
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | 
[2026-01-10 09:22:52] 2026-01-10 14:22:05,478 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:22:52] 2026-01-10 14:22:05,503 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,503 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,503 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,506 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:22:52] 2026-01-10 14:22:05,506 | INFO     | job 6965384193 has completed (purged errors)
[2026-01-10 09:22:52] 2026-01-10 14:22:05,506 | INFO     | overall cleanup function is called
[2026-01-10 09:22:52] 2026-01-10 14:22:05,870 | INFO     | PID=17188 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 09:22:52] 2026-01-10 14:22:05,870 | INFO     | .. there are 16 such processes running
[2026-01-10 09:22:52] 2026-01-10 14:22:06,524 | INFO     | --- collectZombieJob: --- 10, [30396]
[2026-01-10 09:22:52] 2026-01-10 14:22:06,525 | INFO     | zombie collector waiting for pid 30396
[2026-01-10 09:22:52] 2026-01-10 14:22:06,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:22:52] 2026-01-10 14:22:06,525 | INFO     | collected zombie processes
[2026-01-10 09:22:52] 2026-01-10 14:22:06,525 | INFO     | will attempt to kill all subprocesses of pid=30396
[2026-01-10 09:22:52] 2026-01-10 14:22:06,847 | INFO     | process IDs to be killed: [30396] (in reverse order)
[2026-01-10 09:22:52] 2026-01-10 14:22:06,985 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:22:52] 2026-01-10 14:22:06,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:22:52] 2026-01-10 14:22:07,002 | INFO     | did not find any defunct processes belonging to 30396
[2026-01-10 09:22:52] 2026-01-10 14:22:07,015 | INFO     | did not find any defunct processes belonging to 30396
[2026-01-10 09:22:52] 2026-01-10 14:22:07,016 | INFO     | ready for new job
[2026-01-10 09:22:52] 2026-01-10 14:22:07,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:22:52] 2026-01-10 14:22:07,017 | INFO     | ***************************************
[2026-01-10 09:22:52] 2026-01-10 14:22:07,017 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:22:52] 2026-01-10 14:22:07,017 | INFO     | ***************************************
[2026-01-10 09:22:52] 2026-01-10 14:22:07,017 | INFO     | 
[2026-01-10 09:22:52] 2026-01-10 14:22:07,022 | INFO     | architecture information:
[2026-01-10 09:22:52] 2026-01-10 14:22:07,023 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:22:52] 2026-01-10 14:22:07,049 | INFO     | cat /etc/os-release:
[2026-01-10 09:22:52] NAME="CentOS Linux"
[2026-01-10 09:22:52] VERSION="7 (Core)"
[2026-01-10 09:22:52] ID="centos"
[2026-01-10 09:22:52] ID_LIKE="rhel fedora"
[2026-01-10 09:22:52] VERSION_ID="7"
[2026-01-10 09:22:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:22:52] ANSI_COLOR="0;31"
[2026-01-10 09:22:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:22:52] HOME_URL="https://www.centos.org/"
[2026-01-10 09:22:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:22:52] 
[2026-01-10 09:22:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:22:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:22:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:22:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:22:52] 
[2026-01-10 09:22:52] 2026-01-10 14:22:07,050 | INFO     | ***************************************
[2026-01-10 09:22:52] 2026-01-10 14:22:07,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:22:52] 2026-01-10 14:22:07,577 | INFO     | sufficient remaining disk space (126994087936 B)
[2026-01-10 09:22:52] 2026-01-10 14:22:07,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:22:52] 2026-01-10 14:22:07,578 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:22:52] 2026-01-10 14:22:07,578 | INFO     | update_server=False
[2026-01-10 09:22:52] 2026-01-10 14:22:07,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:22:52] 2026-01-10 14:22:07,682 | INFO     | all data control threads have been joined
[2026-01-10 09:22:52] 2026-01-10 14:22:08,067 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:22:52] 2026-01-10 14:22:08,068 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:22:52] 2026-01-10 14:22:08,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:22:52] 2026-01-10 14:22:08,068 | INFO     | will abort loop
[2026-01-10 09:22:52] 2026-01-10 14:22:08,174 | INFO     | all payload control threads have been joined
[2026-01-10 09:22:52] 2026-01-10 14:22:08,302 | INFO     | all job control threads have been joined
[2026-01-10 09:22:52] 2026-01-10 14:22:08,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:22:52] 2026-01-10 14:22:08,583 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:08,687 | INFO     | [data] control thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:08,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:22:52] 2026-01-10 14:22:09,044 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,074 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,181 | INFO     | [payload] control thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,308 | INFO     | [job] control thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,493 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,522 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,537 | INFO     | [job] validate thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,631 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:09,632 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:10,009 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:10,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:22:52] 2026-01-10 14:22:10,749 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:11,489 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:12,530 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:22:52] 2026-01-10 14:22:38,385 | INFO     | PID=17188 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:22:52] 2026-01-10 14:22:38,385 | INFO     | .. there are 16 such processes running
[2026-01-10 09:22:52] 2026-01-10 14:22:38,385 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:22:52] 2026-01-10 14:22:38,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:22:52] 2026-01-10 14:22:38,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:22:52] 2026-01-10 14:22:46,376 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:22:52] 2026-01-10 14:22:47,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998035257152)>', '<ExcThread(monitor, started 139997671843584)>']
[2026-01-10 09:22:52] 2026-01-10 14:22:47,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:22:52] 2026-01-10 14:22:47,440 | INFO     | [monitor] control thread has ended
[2026-01-10 09:22:52] 2026-01-10 14:22:52,284 | INFO     | all workflow threads have been joined
[2026-01-10 09:22:52] 2026-01-10 14:22:52,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:22:52] 2026-01-10 14:22:52,286 | INFO     | traces error code: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:52,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:22:52] 2026-01-10 14:22:52,440 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:22:52] 2026-01-10 14:22:52,444 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:22:52] 2026-01-10 14:22:52,448 [wrapper] pilotpid: 17188
[2026-01-10 09:22:52] 2026-01-10 14:22:52,451 [wrapper] Pilot exit status: 0
[2026-01-10 09:22:52] 2026-01-10 14:22:52,498 [wrapper] pandaids: 6965384193
[2026-01-10 09:22:52] 2026-01-10 14:22:52,589 [wrapper] cleanup supervisor_pilot  138807 17189
[2026-01-10 09:22:52] 2026-01-10 14:22:52,592 [wrapper] Test setup, not cleaning
[2026-01-10 09:22:52] 2026-01-10 14:22:52,594 [wrapper] apfmon messages muted
[2026-01-10 09:22:52] 2026-01-10 14:22:52,597 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:22:52] 2026-01-10 14:22:52,613 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:22:52]  *** Error codes and diagnostics ***
[2026-01-10 09:22:52]     "exeErrorCode": 0,
[2026-01-10 09:22:52]     "exeErrorDiag": "",
[2026-01-10 09:22:52]     "pilotErrorCode": 0,
[2026-01-10 09:22:52]     "pilotErrorDiag": "",
[2026-01-10 09:22:52]  *** Listing of results directory ***
[2026-01-10 09:22:52] total 438928
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 09:22:52] -rwx------. 1 boincer umatlas     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:22:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:12 run_atlas
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:12 job.xml
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas 392461642 Jan 10 08:12 EVNT.47962006._000093.pool.root.1
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 09:22:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:12 shared
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:12 input.tar.gz
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:12 boinc_lockfile
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 08:12 pandaJob.out
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas        57 Jan 10 08:12 setup.sh.local
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas    989556 Jan 10 08:12 agis_schedconf.cvmfs.json
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:22:52] drwx------. 5 boincer umatlas      4096 Jan 10 08:12 pilot3
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:11 boinc_task_state.xml
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas      6954 Jan 10 09:21 init_data.xml
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas  48841860 Jan 10 09:21 HITS.47962010._002334.pool.root.1
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas      1023 Jan 10 09:21 memory_monitor_summary.json
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas        95 Jan 10 09:21 pilot_heartbeat.json
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas   1517777 Jan 10 09:21 log.47962010._002334.job.log.tgz.1
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas      8524 Jan 10 09:22 heartbeat.json
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:22 boinc_mmap_file
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:22 wrapper_checkpoint.txt
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas      5009 Jan 10 09:22 pilotlog.txt
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas    600512 Jan 10 09:22 log.47962010._002334.job.log.1
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas       353 Jan 10 09:22 output.list
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:22 runtime_log
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas   2140160 Jan 10 09:22 result.tar.gz
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 09:22 runtime_log.err
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas       652 Jan 10 09:22 qnxMDmLvny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrVhKDmiiNCEo.diag
[2026-01-10 09:22:52] -rw-r--r--. 1 boincer umatlas     22362 Jan 10 09:22 stderr.txt
[2026-01-10 09:22:52] HITS file was successfully produced:
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas 48841860 Jan 10 09:21 shared/HITS.pool.root.1
[2026-01-10 09:22:52]  *** Contents of shared directory: ***
[2026-01-10 09:22:52] total 433656
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas 392461642 Jan 10 08:12 ATLAS.root_0
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 09:22:52] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:12 input.tar.gz
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas  48841860 Jan 10 09:21 HITS.pool.root.1
[2026-01-10 09:22:52] -rw-------. 1 boincer umatlas   2140160 Jan 10 09:22 result.tar.gz
09:22:54 (8686): run_atlas exited; CPU time 11525.284095
09:22:54 (8686): called boinc_finish(0)

</stderr_txt>
]]>

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