Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:14 (9527): wrapper (7.7.26015): starting
08:12:14 (9527): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:12:14] Arguments: --nthreads 11
[2026-01-10 08:12:14] Threads: 11
[2026-01-10 08:12:14] Checking for CVMFS
[2026-01-10 08:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:12:15] 2.13.3.0 11585 24362 156988 154980 3 406 22595540 40960000 18014 16776704 0 42071782 99.750 26497863 36866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:12:15] CVMFS is ok
[2026-01-10 08:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:12:15] Further information can be found at the LHC@home message board.
[2026-01-10 08:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:12:15] Checking for apptainer binary...
[2026-01-10 08:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:12:15] Running /usr/bin/apptainer --version
[2026-01-10 08:12:16] apptainer version 1.4.5-2.el9
[2026-01-10 08:12:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:12:16] c-212-9.aglt2.org
[2026-01-10 08:12:16] apptainer works
[2026-01-10 08:12:16] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:12:16] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:12:16] Starting ATLAS job with PandaID=6965382613
[2026-01-10 08:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:37:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:37:55]  protocol_id=None
[2026-01-10 09:37:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:37:55]  replicas=None
[2026-01-10 09:37:55]  scope=mc23_13p6TeV
[2026-01-10 09:37:55]  status=None
[2026-01-10 09:37:55]  status_code=0
[2026-01-10 09:37:55]  storage_token=
[2026-01-10 09:37:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965382613/log.47898826._040189.job.log.tgz.1
[2026-01-10 09:37:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/48/log.47898826._040189.job.log.tgz.1
[2026-01-10 09:37:55]  workdir=None
[2026-01-10 09:37:55] ]
[2026-01-10 09:37:55] 2026-01-10 14:37:01,393 | INFO     | transferring file log.47898826._040189.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965382613/log.47898826._040189.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:37:55] 2026-01-10 14:37:01,393 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965382613/log.47898826._040189.job.log.tgz.1 /tmp/boinchome/slots/1/log.47898826._040189.job
[2026-01-10 09:37:55] 2026-01-10 14:37:01,410 | INFO     | adding to output.list: log.47898826._040189.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/48/log.47898826._040189.job.log.tg
[2026-01-10 09:37:55] 2026-01-10 14:37:01,410 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:37:55] 2026-01-10 14:37:01,411 | INFO     | summary of transferred files:
[2026-01-10 09:37:55] 2026-01-10 14:37:01,411 | INFO     |  -- lfn=log.47898826._040189.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:37:55] 2026-01-10 14:37:01,411 | INFO     | stage-out finished correctly
[2026-01-10 09:37:55] 2026-01-10 14:37:01,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:37:55] 2026-01-10 14:37:01,581 | INFO     | time since job start (5061s) is within the limit (349056.0s)
[2026-01-10 09:37:55] 2026-01-10 14:37:03,587 | INFO     | time since job start (5063s) is within the limit (349056.0s)
[2026-01-10 09:37:55] 2026-01-10 14:37:04,097 | INFO     | job 6965382613 has state=finished
[2026-01-10 09:37:55] 2026-01-10 14:37:04,098 | INFO     | preparing for final server update for job 6965382613 in state='finished'
[2026-01-10 09:37:55] 2026-01-10 14:37:04,098 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:37:55] 2026-01-10 14:37:04,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:37:55] 2026-01-10 14:37:04,098 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:37:55] 2026-01-10 14:37:04,099 | INFO     | job 6965382613 has finished - writing final server update
[2026-01-10 09:37:55] 2026-01-10 14:37:04,099 | INFO     | total number of processed events: 400 (read)
[2026-01-10 09:37:55] 2026-01-10 14:37:04,100 | INFO     | executing command: lscpu
[2026-01-10 09:37:55] 2026-01-10 14:37:04,163 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:37:55] 2026-01-10 14:37:04,547 | WARNING  | process 30527 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:37:55] 2026-01-10 14:37:04,547 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965382613/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:37:55] 2026-01-10 14:37:04,977 | INFO     | number of running child processes to parent process 30527: 1
[2026-01-10 09:37:55] 2026-01-10 14:37:04,977 | INFO     | maximum number of monitored processes: 6
[2026-01-10 09:37:55] 2026-01-10 14:37:05,600 | INFO     | time since job start (5065s) is within the limit (349056.0s)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,480 | INFO     | monitor loop #353: job 0:6965382613 is in state 'finished'
[2026-01-10 09:37:55] 2026-01-10 14:37:07,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,605 | INFO     | time since job start (5067s) is within the limit (349056.0s)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,945 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:37:55] 2026-01-10 14:37:07,951 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3211.2075416666667
[2026-01-10 09:37:55] 2026-01-10 14:37:07,965 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965382613/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,965 | INFO     | extracted standard info from prmon json
[2026-01-10 09:37:55] 2026-01-10 14:37:07,965 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:37:55] 2026-01-10 14:37:07,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:37:55] 2026-01-10 14:37:07,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 09:37:55] 2026-01-10 14:37:07,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 09:37:55] 2026-01-10 14:37:07,967 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | sum of square deviations: 136095575.0
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | sum of deviations: -1942862870.9999998
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | mean x: 1768053393.5
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | mean y: 2708317.9210526315
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | intersect: 25242950641.572662
[2026-01-10 09:37:55] 2026-01-10 14:37:07,968 | INFO     | chi2: 0.0652389228964363
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | current memory leak: -14.28 B/s (using 76 data points, chi2=0.07)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | could have reported an average CPU frequency of 3192 MHz (6 samples)
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | ..............................
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . Timing measurements:
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . get job = 0 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . initial setup = 2 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . payload setup = 10 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . stage-in = 0 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . payload execution = 5025 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,969 | INFO     | . stage-out = 0 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,970 | INFO     | . log creation = 0 s
[2026-01-10 09:37:55] 2026-01-10 14:37:07,970 | INFO     | ..............................
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | 
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | job summary report
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | --------------------------------------------------
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | PanDA job id: 6965382613
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | task id: 47898826
[2026-01-10 09:37:55] 2026-01-10 14:37:08,050 | INFO     | errors: (none)
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | pilot state: finished 
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | transexitcode: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | exeerrorcode: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | exeerrordiag: 
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | exitcode: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | exitmsg: OK
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | cpuconsumptiontime: 43359 s
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | nevents: 400
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | neventsw: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | pid: 30527
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | pgrp: 30527
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | corecount: 11
[2026-01-10 09:37:55] 2026-01-10 14:37:08,051 | INFO     | event service: False
[2026-01-10 09:37:55] 2026-01-10 14:37:08,052 | INFO     | sizes: {0: 2283691, 1: 2283946, 11: 2284208, 12: 2284236, 5039: 2310824, 5040: 2310823, 5042: 2320061, 5048: 2320199}
[2026-01-10 09:37:55] 2026-01-10 14:37:08,052 | INFO     | --------------------------------------------------
[2026-01-10 09:37:55] 2026-01-10 14:37:08,052 | INFO     | 
[2026-01-10 09:37:55] 2026-01-10 14:37:08,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:37:55] 2026-01-10 14:37:08,072 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,072 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,072 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,072 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | job 6965382613 has completed (purged errors)
[2026-01-10 09:37:55] 2026-01-10 14:37:08,074 | INFO     | overall cleanup function is called
[2026-01-10 09:37:55] 2026-01-10 14:37:09,082 | INFO     | --- collectZombieJob: --- 10, [30527]
[2026-01-10 09:37:55] 2026-01-10 14:37:09,083 | INFO     | zombie collector waiting for pid 30527
[2026-01-10 09:37:55] 2026-01-10 14:37:09,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:37:55] 2026-01-10 14:37:09,083 | INFO     | collected zombie processes
[2026-01-10 09:37:55] 2026-01-10 14:37:09,083 | INFO     | will attempt to kill all subprocesses of pid=30527
[2026-01-10 09:37:55] 2026-01-10 14:37:09,454 | INFO     | process IDs to be killed: [30527] (in reverse order)
[2026-01-10 09:37:55] 2026-01-10 14:37:09,565 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:37:55] 2026-01-10 14:37:09,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:37:55] 2026-01-10 14:37:09,578 | INFO     | did not find any defunct processes belonging to 30527
[2026-01-10 09:37:55] 2026-01-10 14:37:09,590 | INFO     | did not find any defunct processes belonging to 30527
[2026-01-10 09:37:55] 2026-01-10 14:37:09,591 | INFO     | ready for new job
[2026-01-10 09:37:55] 2026-01-10 14:37:09,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:37:55] 2026-01-10 14:37:09,593 | INFO     | ***************************************
[2026-01-10 09:37:55] 2026-01-10 14:37:09,593 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:37:55] 2026-01-10 14:37:09,593 | INFO     | ***************************************
[2026-01-10 09:37:55] 2026-01-10 14:37:09,593 | INFO     | 
[2026-01-10 09:37:55] 2026-01-10 14:37:09,598 | INFO     | architecture information:
[2026-01-10 09:37:55] 2026-01-10 14:37:09,598 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:37:55] 2026-01-10 14:37:09,616 | INFO     | cat /etc/os-release:
[2026-01-10 09:37:55] NAME="CentOS Linux"
[2026-01-10 09:37:55] VERSION="7 (Core)"
[2026-01-10 09:37:55] ID="centos"
[2026-01-10 09:37:55] ID_LIKE="rhel fedora"
[2026-01-10 09:37:55] VERSION_ID="7"
[2026-01-10 09:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:37:55] ANSI_COLOR="0;31"
[2026-01-10 09:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:37:55] HOME_URL="https://www.centos.org/"
[2026-01-10 09:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:37:55] 
[2026-01-10 09:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:37:55] 
[2026-01-10 09:37:55] 2026-01-10 14:37:09,617 | INFO     | ***************************************
[2026-01-10 09:37:55] 2026-01-10 14:37:10,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:37:55] 2026-01-10 14:37:10,135 | INFO     | sufficient remaining disk space (127740674048 B)
[2026-01-10 09:37:55] 2026-01-10 14:37:10,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:37:55] 2026-01-10 14:37:10,136 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:37:55] 2026-01-10 14:37:10,136 | INFO     | update_server=False
[2026-01-10 09:37:55] 2026-01-10 14:37:10,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:37:55] 2026-01-10 14:37:10,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:37:55] 2026-01-10 14:37:10,546 | INFO     | all data control threads have been joined
[2026-01-10 09:37:55] 2026-01-10 14:37:10,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:37:55] 2026-01-10 14:37:10,991 | INFO     | aborting loop
[2026-01-10 09:37:55] 2026-01-10 14:37:11,141 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,152 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,217 | INFO     | [job] validate thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,251 | INFO     | all payload control threads have been joined
[2026-01-10 09:37:55] 2026-01-10 14:37:11,551 | INFO     | [data] control thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,552 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,645 | INFO     | all job control threads have been joined
[2026-01-10 09:37:55] 2026-01-10 14:37:11,713 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,907 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:11,996 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:37:55] 2026-01-10 14:37:12,098 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,120 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,137 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,255 | INFO     | [payload] control thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,625 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:12,650 | INFO     | [job] control thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:13,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:37:55] 2026-01-10 14:37:14,066 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:16,080 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:37:55] 2026-01-10 14:37:41,148 | INFO     | PID=17603 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:37:55] 2026-01-10 14:37:41,148 | INFO     | .. there are 15 such processes running
[2026-01-10 09:37:55] 2026-01-10 14:37:41,148 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:37:55] 2026-01-10 14:37:41,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:37:55] 2026-01-10 14:37:41,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:37:55] 2026-01-10 14:37:48,115 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:37:55] 2026-01-10 14:37:49,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664713852736)>', '<ExcThread(monitor, started 140664255796992)>']
[2026-01-10 09:37:55] 2026-01-10 14:37:50,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:37:55] 2026-01-10 14:37:50,198 | INFO     | [monitor] control thread has ended
[2026-01-10 09:37:55] 2026-01-10 14:37:54,860 | INFO     | all workflow threads have been joined
[2026-01-10 09:37:55] 2026-01-10 14:37:54,861 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:37:55] 2026-01-10 14:37:54,861 | INFO     | traces error code: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:54,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:37:55] 2026-01-10 14:37:55,018 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:37:55] 2026-01-10 14:37:55,020 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:37:55] 2026-01-10 14:37:55,021 [wrapper] pilotpid: 17603
[2026-01-10 09:37:55] 2026-01-10 14:37:55,023 [wrapper] Pilot exit status: 0
[2026-01-10 09:37:55] 2026-01-10 14:37:55,031 [wrapper] pandaids: 6965382613
[2026-01-10 09:37:55] 2026-01-10 14:37:55,112 [wrapper] cleanup supervisor_pilot  188378 17604
[2026-01-10 09:37:55] 2026-01-10 14:37:55,115 [wrapper] Test setup, not cleaning
[2026-01-10 09:37:55] 2026-01-10 14:37:55,117 [wrapper] apfmon messages muted
[2026-01-10 09:37:55] 2026-01-10 14:37:55,120 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:37:55] 2026-01-10 14:37:55,122 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:37:55]  *** Error codes and diagnostics ***
[2026-01-10 09:37:55]     "exeErrorCode": 0,
[2026-01-10 09:37:55]     "exeErrorDiag": "",
[2026-01-10 09:37:55]     "pilotErrorCode": 0,
[2026-01-10 09:37:55]     "pilotErrorDiag": "",
[2026-01-10 09:37:55]  *** Listing of results directory ***
[2026-01-10 09:37:55] total 432772
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 09:37:55] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:37:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:12 run_atlas
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:12 job.xml
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas 222577629 Jan 10 08:12 EVNT.47898824._000656.pool.root.1
[2026-01-10 09:37:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:12 shared
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas    592411 Jan 10 08:12 input.tar.gz
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:12 boinc_lockfile
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 08:12 pandaJob.out
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas        57 Jan 10 08:12 setup.sh.local
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas    989556 Jan 10 08:12 agis_schedconf.cvmfs.json
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:37:55] drwx------. 5 boincer umatlas      4096 Jan 10 08:12 pilot3
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas 214459647 Jan 10 09:36 HITS.47898826._040189.pool.root.1
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:36 boinc_task_state.xml
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas      1030 Jan 10 09:36 memory_monitor_summary.json
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas    372849 Jan 10 09:37 log.47898826._040189.job.log.tgz.1
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas      7771 Jan 10 09:37 heartbeat.json
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas        95 Jan 10 09:37 pilot_heartbeat.json
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas      6954 Jan 10 09:37 init_data.xml
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:37 boinc_mmap_file
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:37 wrapper_checkpoint.txt
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas      4823 Jan 10 09:37 pilotlog.txt
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas    725182 Jan 10 09:37 log.47898826._040189.job.log.1
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas       357 Jan 10 09:37 output.list
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:37 runtime_log
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas   1116160 Jan 10 09:37 result.tar.gz
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas       652 Jan 10 09:37 wDcMDmTuny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQjmKDmH0Qqim.diag
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 09:37 runtime_log.err
[2026-01-10 09:37:55] -rw-r--r--. 1 boincer umatlas     21860 Jan 10 09:37 stderr.txt
[2026-01-10 09:37:55] HITS file was successfully produced:
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas 214459647 Jan 10 09:36 shared/HITS.pool.root.1
[2026-01-10 09:37:55]  *** Contents of shared directory: ***
[2026-01-10 09:37:55] total 428496
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas 222577629 Jan 10 08:12 ATLAS.root_0
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas    592411 Jan 10 08:12 input.tar.gz
[2026-01-10 09:37:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:12 start_atlas.sh
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas 214459647 Jan 10 09:36 HITS.pool.root.1
[2026-01-10 09:37:55] -rw-------. 1 boincer umatlas   1116160 Jan 10 09:37 result.tar.gz
09:37:56 (9527): run_atlas exited; CPU time 43518.372779
09:37:56 (9527): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN