Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:20 (2156267): wrapper (7.7.26015): starting
16:10:20 (2156267): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 16:10:20] Arguments: --nthreads 12
[2026-01-11 16:10:20] Threads: 12
[2026-01-11 16:10:20] Checking for CVMFS
[2026-01-11 16:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 16:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 16:10:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 16:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 16:10:21] 2.13.3.0 36987 5915 104120 155020 1 59 35829250 46080001 922 130560 0 9497638 99.995 219606 24697 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 16:10:21] CVMFS is ok
[2026-01-11 16:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 16:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 16:10:21] Further information can be found at the LHC@home message board.
[2026-01-11 16:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 16:10:21] Checking for apptainer binary...
[2026-01-11 16:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 16:10:21] Running /usr/bin/apptainer --version
[2026-01-11 16:10:21] apptainer version 1.4.5-2.el9
[2026-01-11 16:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 16:10:21] minis01.farm.particle.cz
[2026-01-11 16:10:21] apptainer works
[2026-01-11 16:10:21] Set ATHENA_PROC_NUMBER=12
[2026-01-11 16:10:21] Set ATHENA_CORE_NUMBER=12
[2026-01-11 16:10:21] Starting ATLAS job with PandaID=6965382790
[2026-01-11 16:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 17:20:02]  *** The last 200 lines of the pilot log: ***
[2026-01-11 17:20:02]  protocol_id=None
[2026-01-11 17:20:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 17:20:02]  replicas=None
[2026-01-11 17:20:02]  scope=mc23_13p6TeV
[2026-01-11 17:20:02]  status=None
[2026-01-11 17:20:02]  status_code=0
[2026-01-11 17:20:02]  storage_token=
[2026-01-11 17:20:02]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965382790/log.47898826._040366.job.log.tgz.1
[2026-01-11 17:20:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/e4/log.47898826._040366.job.log.tgz.1
[2026-01-11 17:20:02]  workdir=None
[2026-01-11 17:20:02] ]
[2026-01-11 17:20:02] 2026-01-11 16:19:23,476 | INFO     | transferring file log.47898826._040366.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965382790/log.47898826._040366.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 17:20:02] 2026-01-11 16:19:23,476 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965382790/log.47898826._040366.job.log.tgz.1 /var/lib/boinc/slots/0/log.47898826._040366.job
[2026-01-11 17:20:02] 2026-01-11 16:19:23,493 | INFO     | adding to output.list: log.47898826._040366.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/e4/log.47898826._040366.job.log.tg
[2026-01-11 17:20:02] 2026-01-11 16:19:23,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 17:20:02] 2026-01-11 16:19:23,494 | INFO     | summary of transferred files:
[2026-01-11 17:20:02] 2026-01-11 16:19:23,494 | INFO     |  -- lfn=log.47898826._040366.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 17:20:02] 2026-01-11 16:19:23,494 | INFO     | stage-out finished correctly
[2026-01-11 17:20:02] 2026-01-11 16:19:24,665 | INFO     | time since job start (4135s) is within the limit (349056.0s)
[2026-01-11 17:20:02] 2026-01-11 16:19:24,808 | WARNING  | process 2166913 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 17:20:02] 2026-01-11 16:19:24,809 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965382790/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:20:02] 2026-01-11 16:19:24,946 | INFO     | number of running child processes to parent process 2166913: 1
[2026-01-11 17:20:02] 2026-01-11 16:19:24,946 | INFO     | maximum number of monitored processes: 6
[2026-01-11 17:20:02] 2026-01-11 16:19:25,876 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 17:20:02] 2026-01-11 16:19:25,953 | INFO     | job 6965382790 has state=finished
[2026-01-11 17:20:02] 2026-01-11 16:19:25,953 | INFO     | preparing for final server update for job 6965382790 in state='finished'
[2026-01-11 17:20:02] 2026-01-11 16:19:25,954 | INFO     | this job has now completed (state=finished)
[2026-01-11 17:20:02] 2026-01-11 16:19:25,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 17:20:02] 2026-01-11 16:19:25,954 | INFO     | log transfer has been attempted: DONE
[2026-01-11 17:20:02] 2026-01-11 16:19:25,954 | INFO     | job 6965382790 has finished - writing final server update
[2026-01-11 17:20:02] 2026-01-11 16:19:25,954 | INFO     | total number of processed events: 400 (read)
[2026-01-11 17:20:02] 2026-01-11 16:19:25,955 | INFO     | executing command: lscpu
[2026-01-11 17:20:02] 2026-01-11 16:19:25,991 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 17:20:02] 2026-01-11 16:19:26,672 | INFO     | time since job start (4137s) is within the limit (349056.0s)
[2026-01-11 17:20:02] 2026-01-11 16:19:26,673 | INFO     | 4138s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 17:20:02] 2026-01-11 16:19:27,454 | INFO     | monitor loop #312: job 0:6965382790 is in state 'finished'
[2026-01-11 17:20:02] 2026-01-11 16:19:27,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:20:02] 2026-01-11 16:19:28,678 | INFO     | time since job start (4139s) is within the limit (349056.0s)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,460 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 17:20:02] 2026-01-11 16:19:29,464 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2702.5305937499993
[2026-01-11 17:20:02] 2026-01-11 16:19:29,469 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965382790/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,469 | INFO     | extracted standard info from prmon json
[2026-01-11 17:20:02] 2026-01-11 16:19:29,469 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 17:20:02] 2026-01-11 16:19:29,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 17:20:02] 2026-01-11 16:19:29,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 17:20:02] 2026-01-11 16:19:29,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 17:20:02] 2026-01-11 16:19:29,471 | INFO     | fitting pss+swap vs Time
[2026-01-11 17:20:02] 2026-01-11 16:19:29,471 | INFO     | sum of square deviations: 70364110.0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | sum of deviations: 1454042969.9999993
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | mean x: 1768146388.0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | mean y: 2732145.62295082
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | intersect: -36535224852.65773
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | chi2: 0.002895735792660192
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | current memory leak: 20.66 B/s (using 61 data points, chi2=0.00)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | could have reported an average CPU frequency of 2787 MHz (6 samples)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | ..............................
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | . Timing measurements:
[2026-01-11 17:20:02] 2026-01-11 16:19:29,472 | INFO     | . get job = 0 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . initial setup = 1 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . payload setup = 4 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . stage-in = 0 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . payload execution = 4108 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . stage-out = 0 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | . log creation = 0 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,473 | INFO     | ..............................
[2026-01-11 17:20:02] 2026-01-11 16:19:29,542 | INFO     | 
[2026-01-11 17:20:02] 2026-01-11 16:19:29,542 | INFO     | job summary report
[2026-01-11 17:20:02] 2026-01-11 16:19:29,542 | INFO     | --------------------------------------------------
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | PanDA job id: 6965382790
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | task id: 47898826
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | errors: (none)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | pilot state: finished 
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | transexitcode: 0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | exeerrorcode: 0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | exeerrordiag: 
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | exitcode: 0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | exitmsg: OK
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | cpuconsumptiontime: 45564 s
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | nevents: 400
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | neventsw: 0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | pid: 2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | pgrp: 2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | corecount: 12
[2026-01-11 17:20:02] 2026-01-11 16:19:29,543 | INFO     | event service: False
[2026-01-11 17:20:02] 2026-01-11 16:19:29,544 | INFO     | sizes: {0: 2283806, 1: 2283948, 4: 2284210, 11: 2284238, 4116: 2310275, 4117: 2310274, 4119: 2319456, 4121: 2319512, 4125: 2319706}
[2026-01-11 17:20:02] 2026-01-11 16:19:29,544 | INFO     | --------------------------------------------------
[2026-01-11 17:20:02] 2026-01-11 16:19:29,544 | INFO     | 
[2026-01-11 17:20:02] 2026-01-11 16:19:29,544 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 17:20:02] 2026-01-11 16:19:29,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 17:20:02] 2026-01-11 16:19:29,563 | INFO     | job 6965382790 has completed (purged errors)
[2026-01-11 17:20:02] 2026-01-11 16:19:29,563 | INFO     | overall cleanup function is called
[2026-01-11 17:20:02] 2026-01-11 16:19:30,572 | INFO     | --- collectZombieJob: --- 10, [2166913]
[2026-01-11 17:20:02] 2026-01-11 16:19:30,572 | INFO     | zombie collector waiting for pid 2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:30,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 17:20:02] 2026-01-11 16:19:30,573 | INFO     | collected zombie processes
[2026-01-11 17:20:02] 2026-01-11 16:19:30,573 | INFO     | will attempt to kill all subprocesses of pid=2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:30,724 | INFO     | process IDs to be killed: [2166913] (in reverse order)
[2026-01-11 17:20:02] 2026-01-11 16:19:30,776 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 17:20:02] 2026-01-11 16:19:30,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 17:20:02] 2026-01-11 16:19:30,781 | INFO     | did not find any defunct processes belonging to 2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:30,785 | INFO     | did not find any defunct processes belonging to 2166913
[2026-01-11 17:20:02] 2026-01-11 16:19:30,785 | INFO     | ready for new job
[2026-01-11 17:20:02] 2026-01-11 16:19:30,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 17:20:02] 2026-01-11 16:19:30,786 | INFO     | ***************************************
[2026-01-11 17:20:02] 2026-01-11 16:19:30,787 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 17:20:02] 2026-01-11 16:19:30,787 | INFO     | ***************************************
[2026-01-11 17:20:02] 2026-01-11 16:19:30,787 | INFO     | 
[2026-01-11 17:20:02] 2026-01-11 16:19:30,788 | INFO     | architecture information:
[2026-01-11 17:20:02] 2026-01-11 16:19:30,789 | INFO     | executing command: cat /etc/os-release
[2026-01-11 17:20:02] 2026-01-11 16:19:30,803 | INFO     | cat /etc/os-release:
[2026-01-11 17:20:02] NAME="CentOS Linux"
[2026-01-11 17:20:02] VERSION="7 (Core)"
[2026-01-11 17:20:02] ID="centos"
[2026-01-11 17:20:02] ID_LIKE="rhel fedora"
[2026-01-11 17:20:02] VERSION_ID="7"
[2026-01-11 17:20:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 17:20:02] ANSI_COLOR="0;31"
[2026-01-11 17:20:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 17:20:02] HOME_URL="https://www.centos.org/"
[2026-01-11 17:20:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 17:20:02] 
[2026-01-11 17:20:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 17:20:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 17:20:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 17:20:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 17:20:02] 
[2026-01-11 17:20:02] 2026-01-11 16:19:30,803 | INFO     | ***************************************
[2026-01-11 17:20:02] 2026-01-11 16:19:31,306 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 17:20:02] 2026-01-11 16:19:31,321 | INFO     | sufficient remaining disk space (72133640192 B)
[2026-01-11 17:20:02] 2026-01-11 16:19:31,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 17:20:02] 2026-01-11 16:19:31,321 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 17:20:02] 2026-01-11 16:19:31,321 | INFO     | update_server=False
[2026-01-11 17:20:02] 2026-01-11 16:19:31,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 17:20:02] 2026-01-11 16:19:31,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:20:02] 2026-01-11 16:19:31,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:20:02] 2026-01-11 16:19:31,322 | INFO     | aborting loop
[2026-01-11 17:20:02] 2026-01-11 16:19:31,416 | INFO     | all payload control threads have been joined
[2026-01-11 17:20:02] 2026-01-11 16:19:31,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 17:20:02] 2026-01-11 16:19:31,820 | INFO     | all data control threads have been joined
[2026-01-11 17:20:02] 2026-01-11 16:19:31,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 17:20:02] 2026-01-11 16:19:32,327 | INFO     | [job] retrieve thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,327 | INFO     | [job] job monitor thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,327 | INFO     | [job] queue monitor thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,350 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,422 | INFO     | [payload] control thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,547 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,583 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,826 | INFO     | [data] control thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:32,980 | INFO     | all job control threads have been joined
[2026-01-11 17:20:02] 2026-01-11 16:19:33,001 | INFO     | [payload] failed_post thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,407 | INFO     | [data] copytool_in thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,579 | INFO     | [data] copytool_out thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,638 | INFO     | [payload] validate_post thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,644 | INFO     | [job] validate thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:33,986 | INFO     | [job] control thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:35,174 | INFO     | [monitor] cgroup control has ended
[2026-01-11 17:20:02] 2026-01-11 16:19:35,964 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 17:20:02] 2026-01-11 16:19:36,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695821399872)>', '<ExcThread(monitor, started 139695455450880)>']
[2026-01-11 17:20:02] 2026-01-11 16:19:41,120 | INFO     | all workflow threads have been joined
[2026-01-11 17:20:02] 2026-01-11 16:19:41,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 17:20:02] 2026-01-11 16:19:41,120 | INFO     | traces error code: 0
[2026-01-11 17:20:02] 2026-01-11 16:19:41,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 17:20:02] 2026-01-11 16:20:01,951 | INFO     | PID=2160165 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | INFO     | .. there are 2 such processes running
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 17:20:02] 2026-01-11 16:20:01,952 | INFO     | [monitor] control thread has ended
[2026-01-11 17:20:02] 2026-01-11 16:20:02,058 [wrapper] ==== pilot stdout END ====
[2026-01-11 17:20:02] 2026-01-11 16:20:02,061 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 17:20:02] 2026-01-11 16:20:02,064 [wrapper] pilotpid: 2160165
[2026-01-11 17:20:02] 2026-01-11 16:20:02,066 [wrapper] Pilot exit status: 0
[2026-01-11 17:20:02] 2026-01-11 16:20:02,077 [wrapper] pandaids: 6965382790
[2026-01-11 17:20:02] 2026-01-11 16:20:02,119 [wrapper] cleanup supervisor_pilot 2254825 2160166
[2026-01-11 17:20:02] 2026-01-11 16:20:02,122 [wrapper] Test setup, not cleaning
[2026-01-11 17:20:02] 2026-01-11 16:20:02,125 [wrapper] apfmon messages muted
[2026-01-11 17:20:02] 2026-01-11 16:20:02,127 [wrapper] ==== wrapper stdout END ====
[2026-01-11 17:20:02] 2026-01-11 16:20:02,130 [wrapper] ==== wrapper stderr END ====
[2026-01-11 17:20:02]  *** Error codes and diagnostics ***
[2026-01-11 17:20:02]     "exeErrorCode": 0,
[2026-01-11 17:20:02]     "exeErrorDiag": "",
[2026-01-11 17:20:02]     "pilotErrorCode": 0,
[2026-01-11 17:20:02]     "pilotErrorDiag": "",
[2026-01-11 17:20:02]  *** Listing of results directory ***
[2026-01-11 17:20:02] total 436988
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:09 queuedata.json
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-11 17:20:02] -rwx------. 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc       100 Jan 11 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 17:20:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 16:10 run_atlas
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc       105 Jan 11 16:10 job.xml
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc      6523 Jan 11 16:10 init_data.xml
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc 223942818 Jan 11 16:10 EVNT.47898824._001192.pool.root.1
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc     15847 Jan 11 16:10 start_atlas.sh
[2026-01-11 17:20:02] drwxrwx--x. 2 boinc boinc      4096 Jan 11 16:10 shared
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc    592402 Jan 11 16:10 input.tar.gz
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc         0 Jan 11 16:10 boinc_lockfile
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc      2519 Jan 11 16:10 pandaJob.out
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc    989556 Jan 11 16:10 agis_schedconf.cvmfs.json
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc   1516240 Jan 11 16:10 agis_ddmendpoints.agis.ALL.json
[2026-01-11 17:20:02] drwx------. 5 boinc boinc      4096 Jan 11 16:10 pilot3
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc 217613819 Jan 11 17:18 HITS.47898826._040366.pool.root.1
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc       530 Jan 11 17:19 boinc_task_state.xml
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc      1014 Jan 11 17:19 memory_monitor_summary.json
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc    384449 Jan 11 17:19 log.47898826._040366.job.log.tgz.1
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc        95 Jan 11 17:19 pilot_heartbeat.json
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc      7764 Jan 11 17:19 heartbeat.json
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc      8192 Jan 11 17:19 boinc_mmap_file
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc        27 Jan 11 17:19 wrapper_checkpoint.txt
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc       822 Jan 11 17:20 pilotlog.txt
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc    621455 Jan 11 17:20 log.47898826._040366.job.log.1
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc       357 Jan 11 17:20 output.list
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc       620 Jan 11 17:20 runtime_log
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc   1024000 Jan 11 17:20 result.tar.gz
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc       663 Jan 11 17:20 ylJKDmUuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3UhKDm9IrRLn.diag
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc      8864 Jan 11 17:20 runtime_log.err
[2026-01-11 17:20:02] -rw-r--r--. 1 boinc boinc     21918 Jan 11 17:20 stderr.txt
[2026-01-11 17:20:02] HITS file was successfully produced:
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc 217613819 Jan 11 17:18 shared/HITS.pool.root.1
[2026-01-11 17:20:02]  *** Contents of shared directory: ***
[2026-01-11 17:20:02] total 432816
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc 223942818 Jan 11 16:10 ATLAS.root_0
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc     15847 Jan 11 16:10 start_atlas.sh
[2026-01-11 17:20:02] -rw-r--r--. 2 boinc boinc    592402 Jan 11 16:10 input.tar.gz
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc 217613819 Jan 11 17:18 HITS.pool.root.1
[2026-01-11 17:20:02] -rw-------. 1 boinc boinc   1024000 Jan 11 17:20 result.tar.gz
17:20:03 (2156267): run_atlas exited; CPU time 45615.063272
17:20:03 (2156267): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN