Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:26 (1866521): wrapper (7.7.26015): starting
08:40:26 (1866521): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:40:26] Arguments: --nthreads 9
[2026-01-10 08:40:26] Threads: 9
[2026-01-10 08:40:26] Checking for CVMFS
[2026-01-10 08:40:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:40:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:40:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:40:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:40:27] 2.13.3.0 12942 40484 473888 154981 3 272 26000151 32935937 36599 16776704 0 422483051 99.769 237509878 28851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:40:27] CVMFS is ok
[2026-01-10 08:40:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:40:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:40:27] Further information can be found at the LHC@home message board.
[2026-01-10 08:40:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:40:27] Checking for apptainer binary...
[2026-01-10 08:40:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:40:27] Running /usr/bin/apptainer --version
[2026-01-10 08:40:27] apptainer version 1.4.5-2.el9
[2026-01-10 08:40:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:40:28] lc-10-9.aglt2.org
[2026-01-10 08:40:28] apptainer works
[2026-01-10 08:40:28] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:40:28] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:40:28] Starting ATLAS job with PandaID=6965382778
[2026-01-10 08:40:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:41:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:41:06] 2026-01-10 18:39:51,980 | INFO     | time since job start (17904s) is within the limit (349056.0s)
[2026-01-10 13:41:06] 2026-01-10 18:39:53,776 | INFO     | monitor loop #943: job 0:6965382778 is in state 'finished'
[2026-01-10 13:41:06] 2026-01-10 18:39:53,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:41:06] 2026-01-10 18:39:56,015 | INFO     | PID=1876887 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:41:06] 2026-01-10 18:39:56,015 | INFO     | .. there are 58 such processes running
[2026-01-10 13:41:06] 2026-01-10 18:39:56,306 | INFO     | monitor loop #944: job 0:6965382778 is in state 'finished'
[2026-01-10 13:41:06] 2026-01-10 18:39:56,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:41:06] 2026-01-10 18:39:57,016 | INFO     | time since job start (17910s) is within the limit (349056.0s)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,442 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 13:41:06] 2026-01-10 18:39:58,451 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2792.84325
[2026-01-10 13:41:06] 2026-01-10 18:39:58,570 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965382778/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,585 | INFO     | extracted standard info from prmon json
[2026-01-10 13:41:06] 2026-01-10 18:39:58,586 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:41:06] 2026-01-10 18:39:58,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:41:06] 2026-01-10 18:39:58,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:41:06] 2026-01-10 18:39:58,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:41:06] 2026-01-10 18:39:58,615 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:41:06] 2026-01-10 18:39:58,640 | INFO     | sum of square deviations: 7640878084.907211
[2026-01-10 13:41:06] 2026-01-10 18:39:58,642 | INFO     | sum of deviations: 46088992536.09277
[2026-01-10 13:41:06] 2026-01-10 18:39:58,642 | INFO     | mean x: 1768061475.1030927
[2026-01-10 13:41:06] 2026-01-10 18:39:58,643 | INFO     | mean y: 2538079.23024055
[2026-01-10 13:41:06] 2026-01-10 18:39:58,643 | INFO     | intersect: -10662227308.185202
[2026-01-10 13:41:06] 2026-01-10 18:39:58,643 | INFO     | chi2: 2.7548537706937686
[2026-01-10 13:41:06] 2026-01-10 18:39:58,666 | INFO     | sum of square deviations: 7253745092.353155
[2026-01-10 13:41:06] 2026-01-10 18:39:58,669 | INFO     | sum of deviations: 63767574894.11887
[2026-01-10 13:41:06] 2026-01-10 18:39:58,669 | INFO     | mean x: 1768061322.604895
[2026-01-10 13:41:06] 2026-01-10 18:39:58,669 | INFO     | mean y: 2544940.6293706293
[2026-01-10 13:41:06] 2026-01-10 18:39:58,669 | INFO     | intersect: -15540458207.559208
[2026-01-10 13:41:06] 2026-01-10 18:39:58,694 | INFO     | chi2: 2.071040717049861
[2026-01-10 13:41:06] 2026-01-10 18:39:58,694 | INFO     | current chi2=2.071040717049861 (change=24.822117998361115 %)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,694 | INFO     | right removable region: 285
[2026-01-10 13:41:06] 2026-01-10 18:39:58,695 | INFO     | sum of square deviations: 7253762170.758721
[2026-01-10 13:41:06] 2026-01-10 18:39:58,697 | INFO     | sum of deviations: -14067079452.419579
[2026-01-10 13:41:06] 2026-01-10 18:39:58,720 | INFO     | mean x: 1768061627.597902
[2026-01-10 13:41:06] 2026-01-10 18:39:58,720 | INFO     | mean y: 2561652.3006993006
[2026-01-10 13:41:06] 2026-01-10 18:39:58,720 | INFO     | intersect: 3431329070.7384734
[2026-01-10 13:41:06] 2026-01-10 18:39:58,721 | INFO     | chi2: 0.8523380353714356
[2026-01-10 13:41:06] 2026-01-10 18:39:58,721 | INFO     | current chi2=0.8523380353714356 (change=69.06049807657169 %)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,721 | INFO     | sum of square deviations: 6879931630.405711
[2026-01-10 13:41:06] 2026-01-10 18:39:58,756 | INFO     | sum of deviations: -25922317369.900352
[2026-01-10 13:41:06] 2026-01-10 18:39:58,756 | INFO     | mean x: 1768061780.0960853
[2026-01-10 13:41:06] 2026-01-10 18:39:58,756 | INFO     | mean y: 2566476.181494662
[2026-01-10 13:41:06] 2026-01-10 18:39:58,757 | INFO     | intersect: 6664298169.951096
[2026-01-10 13:41:06] 2026-01-10 18:39:58,757 | INFO     | chi2: 0.7850121437470662
[2026-01-10 13:41:06] 2026-01-10 18:39:58,757 | INFO     | current chi2=0.7850121437470662 (change=7.898966000623196 %)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,757 | INFO     | left removable region: 20
[2026-01-10 13:41:06] 2026-01-10 18:39:58,758 | INFO     | sum of square deviations: 5770373591.826395
[2026-01-10 13:41:06] 2026-01-10 18:39:58,785 | INFO     | sum of deviations: -6626223383.792444
[2026-01-10 13:41:06] 2026-01-10 18:39:58,785 | INFO     | mean x: 1768061902.090566
[2026-01-10 13:41:06] 2026-01-10 18:39:58,785 | INFO     | mean y: 2573543.283018868
[2026-01-10 13:41:06] 2026-01-10 18:39:58,785 | INFO     | intersect: 2032870703.9763753
[2026-01-10 13:41:06] 2026-01-10 18:39:58,786 | INFO     | chi2: 0.05039839691336027
[2026-01-10 13:41:06] 2026-01-10 18:39:58,786 | INFO     | current memory leak: -1.15 B/s (using 265 data points, chi2=0.05)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | could have reported an average CPU frequency of 2721 MHz (13 samples)
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | ..............................
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . Timing measurements:
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . get job = 0 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . initial setup = 5 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . payload setup = 42 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . stage-in = 0 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,787 | INFO     | . payload execution = 17757 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,788 | INFO     | . stage-out = 5 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,788 | INFO     | . log creation = 0 s
[2026-01-10 13:41:06] 2026-01-10 18:39:58,788 | INFO     | ..............................
[2026-01-10 13:41:06] 2026-01-10 18:39:59,072 | INFO     | time since job start (17912s) is within the limit (349056.0s)
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | job summary report
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | --------------------------------------------------
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | PanDA job id: 6965382778
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | task id: 47898826
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | errors: (none)
[2026-01-10 13:41:06] 2026-01-10 18:39:59,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | pilot state: finished 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | transexitcode: 0
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | exeerrorcode: 0
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | exeerrordiag: 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | exitcode: 0
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | exitmsg: OK
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | cpuconsumptiontime: 60694 s
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | nevents: 400
[2026-01-10 13:41:06] 2026-01-10 18:39:59,939 | INFO     | neventsw: 0
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | pid: 1919070
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | pgrp: 1919070
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | corecount: 9
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | event service: False
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283805, 3: 2284004, 14: 2284004, 25: 2284032, 30: 2284450, 36: 2284478, 17803: 2316572, 17804: 2316571, 17810: 2325961, 17844: 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | --------------------------------------------------
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | 
[2026-01-10 13:41:06] 2026-01-10 18:39:59,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 13:41:06] 2026-01-10 18:40:00,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,158 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:41:06] 2026-01-10 18:40:00,205 | INFO     | job 6965382778 has completed (purged errors)
[2026-01-10 13:41:06] 2026-01-10 18:40:00,206 | INFO     | overall cleanup function is called
[2026-01-10 13:41:06] 2026-01-10 18:40:01,292 | INFO     | --- collectZombieJob: --- 10, [1919070]
[2026-01-10 13:41:06] 2026-01-10 18:40:01,347 | INFO     | zombie collector waiting for pid 1919070
[2026-01-10 13:41:06] 2026-01-10 18:40:01,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:41:06] 2026-01-10 18:40:01,347 | INFO     | collected zombie processes
[2026-01-10 13:41:06] 2026-01-10 18:40:01,347 | INFO     | will attempt to kill all subprocesses of pid=1919070
[2026-01-10 13:41:06] 2026-01-10 18:40:04,073 | INFO     | process IDs to be killed: [1919070] (in reverse order)
[2026-01-10 13:41:06] 2026-01-10 18:40:04,459 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:41:06] 2026-01-10 18:40:04,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:41:06] 2026-01-10 18:40:04,628 | INFO     | did not find any defunct processes belonging to 1919070
[2026-01-10 13:41:06] 2026-01-10 18:40:04,711 | INFO     | did not find any defunct processes belonging to 1919070
[2026-01-10 13:41:06] 2026-01-10 18:40:04,715 | INFO     | ready for new job
[2026-01-10 13:41:06] 2026-01-10 18:40:04,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:41:06] 2026-01-10 18:40:04,718 | INFO     | ***************************************
[2026-01-10 13:41:06] 2026-01-10 18:40:04,718 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:41:06] 2026-01-10 18:40:04,718 | INFO     | ***************************************
[2026-01-10 13:41:06] 2026-01-10 18:40:04,718 | INFO     | 
[2026-01-10 13:41:06] 2026-01-10 18:40:04,734 | INFO     | architecture information:
[2026-01-10 13:41:06] 2026-01-10 18:40:04,753 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:41:06] 2026-01-10 18:40:04,830 | INFO     | cat /etc/os-release:
[2026-01-10 13:41:06] NAME="CentOS Linux"
[2026-01-10 13:41:06] VERSION="7 (Core)"
[2026-01-10 13:41:06] ID="centos"
[2026-01-10 13:41:06] ID_LIKE="rhel fedora"
[2026-01-10 13:41:06] VERSION_ID="7"
[2026-01-10 13:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:41:06] ANSI_COLOR="0;31"
[2026-01-10 13:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:41:06] HOME_URL="https://www.centos.org/"
[2026-01-10 13:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:41:06] 
[2026-01-10 13:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:41:06] 
[2026-01-10 13:41:06] 2026-01-10 18:40:04,830 | INFO     | ***************************************
[2026-01-10 13:41:06] 2026-01-10 18:40:05,334 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 13:41:06] 2026-01-10 18:40:05,463 | INFO     | sufficient remaining disk space (94581555200 B)
[2026-01-10 13:41:06] 2026-01-10 18:40:05,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:41:06] 2026-01-10 18:40:05,463 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:41:06] 2026-01-10 18:40:05,464 | INFO     | update_server=False
[2026-01-10 13:41:06] 2026-01-10 18:40:05,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:41:06] 2026-01-10 18:40:05,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:41:06] 2026-01-10 18:40:05,467 | INFO     | aborting loop
[2026-01-10 13:41:06] 2026-01-10 18:40:05,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:41:06] 2026-01-10 18:40:05,549 | INFO     | all job control threads have been joined
[2026-01-10 13:41:06] 2026-01-10 18:40:06,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:41:06] 2026-01-10 18:40:06,246 | INFO     | all data control threads have been joined
[2026-01-10 13:41:06] 2026-01-10 18:40:06,470 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:06,473 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:06,474 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:06,478 | INFO     | all payload control threads have been joined
[2026-01-10 13:41:06] 2026-01-10 18:40:06,555 | INFO     | [job] control thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:06,676 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:06,676 | INFO     | [job] validate thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,269 | INFO     | [data] control thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,508 | INFO     | [payload] control thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,555 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,559 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:07,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:41:06] 2026-01-10 18:40:08,178 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:11,874 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:41:06] 2026-01-10 18:40:38,716 | INFO     | PID=1876887 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:41:06] 2026-01-10 18:40:38,716 | INFO     | .. there are 58 such processes running
[2026-01-10 13:41:06] 2026-01-10 18:40:38,730 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:41:06] 2026-01-10 18:40:38,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:41:06] 2026-01-10 18:40:38,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:41:06] 2026-01-10 18:40:58,685 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:41:06] 2026-01-10 18:41:00,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752849631040)>', '<ExcThread(monitor, started 139752330229504)>']
[2026-01-10 13:41:06] 2026-01-10 18:41:00,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:41:06] 2026-01-10 18:41:00,861 | INFO     | [monitor] control thread has ended
[2026-01-10 13:41:06] 2026-01-10 18:41:05,150 | INFO     | all workflow threads have been joined
[2026-01-10 13:41:06] 2026-01-10 18:41:05,150 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:41:06] 2026-01-10 18:41:05,150 | INFO     | traces error code: 0
[2026-01-10 13:41:06] 2026-01-10 18:41:05,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:41:06] 2026-01-10 18:41:05,901 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:41:06] 2026-01-10 18:41:05,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:41:06] 2026-01-10 18:41:05,931 [wrapper] pilotpid: 1876887
[2026-01-10 13:41:06] 2026-01-10 18:41:05,964 [wrapper] Pilot exit status: 0
[2026-01-10 13:41:06] 2026-01-10 18:41:06,060 [wrapper] pandaids: 6965382778
[2026-01-10 13:41:06] 2026-01-10 18:41:06,260 [wrapper] cleanup supervisor_pilot   78442 1876888
[2026-01-10 13:41:06] 2026-01-10 18:41:06,306 [wrapper] Test setup, not cleaning
[2026-01-10 13:41:06] 2026-01-10 18:41:06,330 [wrapper] apfmon messages muted
[2026-01-10 13:41:06] 2026-01-10 18:41:06,364 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:41:06] 2026-01-10 18:41:06,420 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:41:06]  *** Error codes and diagnostics ***
[2026-01-10 13:41:06]     "exeErrorCode": 0,
[2026-01-10 13:41:06]     "exeErrorDiag": "",
[2026-01-10 13:41:06]     "pilotErrorCode": 0,
[2026-01-10 13:41:06]     "pilotErrorDiag": "",
[2026-01-10 13:41:06]  *** Listing of results directory ***
[2026-01-10 13:41:06] total 440212
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 13:41:06] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:41:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:40 run_atlas
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:40 job.xml
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas 227357252 Jan 10 08:40 EVNT.47898824._001155.pool.root.1
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:40 start_atlas.sh
[2026-01-10 13:41:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:40 shared
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 08:40 input.tar.gz
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:40 boinc_lockfile
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:40 pandaJob.out
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas        57 Jan 10 08:40 setup.sh.local
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas    989556 Jan 10 08:41 agis_schedconf.cvmfs.json
[2026-01-10 13:41:06] drwx------. 5 boincer umatlas      4096 Jan 10 08:41 pilot3
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas      6864 Jan 10 13:36 init_data.xml
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas 214441224 Jan 10 13:37 HITS.47898826._040354.pool.root.1
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:38 boinc_task_state.xml
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas      1044 Jan 10 13:39 memory_monitor_summary.json
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas    485637 Jan 10 13:39 log.47898826._040354.job.log.tgz.1
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas      7825 Jan 10 13:39 heartbeat.json
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas        95 Jan 10 13:40 pilot_heartbeat.json
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:40 boinc_mmap_file
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:40 wrapper_checkpoint.txt
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas      4824 Jan 10 13:41 pilotlog.txt
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas   2046741 Jan 10 13:41 log.47898826._040354.job.log.1
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas       357 Jan 10 13:41 output.list
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:41 runtime_log
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas   2549760 Jan 10 13:41 result.tar.gz
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 13:41 runtime_log.err
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas       656 Jan 10 13:41 Q8NODmTuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxUhKDmX9E8Wm.diag
[2026-01-10 13:41:06] -rw-r--r--. 1 boincer umatlas     21510 Jan 10 13:41 stderr.txt
[2026-01-10 13:41:06] HITS file was successfully produced:
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas 214441224 Jan 10 13:37 shared/HITS.pool.root.1
[2026-01-10 13:41:06]  *** Contents of shared directory: ***
[2026-01-10 13:41:06] total 434540
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas 227357252 Jan 10 08:40 ATLAS.root_0
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:40 start_atlas.sh
[2026-01-10 13:41:06] -rw-r--r--. 2 boincer umatlas    592409 Jan 10 08:40 input.tar.gz
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas 214441224 Jan 10 13:37 HITS.pool.root.1
[2026-01-10 13:41:06] -rw-------. 1 boincer umatlas   2549760 Jan 10 13:41 result.tar.gz
13:41:08 (1866521): run_atlas exited; CPU time 61699.855803
13:41:08 (1866521): called boinc_finish(0)

</stderr_txt>
]]>

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