Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:31 (28574): wrapper (7.7.26015): starting
08:11:31 (28574): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:11:31] Arguments: --nthreads 8
[2026-01-10 08:11:31] Threads: 8
[2026-01-10 08:11:31] Checking for CVMFS
[2026-01-10 08:11:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:11:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:11:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:11:32] 2.11.2.0 28705 182686 136788 154980 2 3 11281080 18432001 3 130560 0 122945771 99.980 7132941 33972 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:11:32] CVMFS is ok
[2026-01-10 08:11:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:11:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:11:32] Further information can be found at the LHC@home message board.
[2026-01-10 08:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:11:32] Checking for apptainer binary...
[2026-01-10 08:11:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:11:32] Running /usr/bin/apptainer --version
[2026-01-10 08:11:32] apptainer version 1.3.2-1.el7
[2026-01-10 08:11:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:11:32] c-206-27.aglt2.org
[2026-01-10 08:11:32] apptainer works
[2026-01-10 08:11:32] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:11:32] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:11:32] Starting ATLAS job with PandaID=6965382762
[2026-01-10 08:11:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:35:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:35:17] 2026-01-10 17:34:30,114 | INFO     | chi2: 1.437978057995951
[2026-01-10 12:35:17] 2026-01-10 17:34:30,114 | INFO     | sum of square deviations: 5021496942.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,116 | INFO     | sum of deviations: 61485119458.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,116 | INFO     | mean x: 1768058418.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,116 | INFO     | mean y: 2468464.37944664
[2026-01-10 12:35:17] 2026-01-10 17:34:30,116 | INFO     | intersect: -21646311629.50127
[2026-01-10 12:35:17] 2026-01-10 17:34:30,116 | INFO     | chi2: 1.4377138465278647
[2026-01-10 12:35:17] 2026-01-10 17:34:30,117 | INFO     | current chi2=1.4377138465278647 (change=0.018373817779557457 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,117 | INFO     | right removable region: 252
[2026-01-10 12:35:17] 2026-01-10 17:34:30,117 | INFO     | sum of square deviations: 5021496942.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | sum of deviations: 22559978188.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | mean x: 1768058723.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | mean y: 2489365.743083004
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | intersect: -7940832453.765284
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | chi2: 0.0749718188254129
[2026-01-10 12:35:17] 2026-01-10 17:34:30,119 | INFO     | current chi2=0.0749718188254129 (change=94.78630300312801 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,120 | INFO     | sum of square deviations: 4729621702.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,121 | INFO     | sum of deviations: 11111665968.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,121 | INFO     | mean x: 1768058875.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,121 | INFO     | mean y: 2495330.875
[2026-01-10 12:35:17] 2026-01-10 17:34:30,122 | INFO     | intersect: -4151342095.253617
[2026-01-10 12:35:17] 2026-01-10 17:34:30,122 | INFO     | chi2: 0.004183867380440084
[2026-01-10 12:35:17] 2026-01-10 17:34:30,122 | INFO     | current chi2=0.004183867380440084 (change=94.4194132595568 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,122 | INFO     | sum of square deviations: 4449281562.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,124 | INFO     | sum of deviations: 8747959736.000002
[2026-01-10 12:35:17] 2026-01-10 17:34:30,124 | INFO     | mean x: 1768059028.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,124 | INFO     | mean y: 2496614.4814814813
[2026-01-10 12:35:17] 2026-01-10 17:34:30,124 | INFO     | intersect: -3473774548.0166626
[2026-01-10 12:35:17] 2026-01-10 17:34:30,125 | INFO     | chi2: 0.0023094313333767258
[2026-01-10 12:35:17] 2026-01-10 17:34:30,125 | INFO     | current chi2=0.0023094313333767258 (change=44.801516793445636 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,125 | INFO     | sum of square deviations: 4180243959.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,126 | INFO     | sum of deviations: 7142805125.999998
[2026-01-10 12:35:17] 2026-01-10 17:34:30,127 | INFO     | mean x: 1768059180.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,127 | INFO     | mean y: 2497522.714285714
[2026-01-10 12:35:17] 2026-01-10 17:34:30,127 | INFO     | intersect: -3018594619.2518263
[2026-01-10 12:35:17] 2026-01-10 17:34:30,127 | INFO     | chi2: 0.00152638056479449
[2026-01-10 12:35:17] 2026-01-10 17:34:30,127 | INFO     | current chi2=0.00152638056479449 (change=33.906648674299454 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,128 | INFO     | sum of square deviations: 3922276332.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,129 | INFO     | sum of deviations: 6125813614.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,129 | INFO     | mean x: 1768059333.0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,129 | INFO     | mean y: 2498123.0858369097
[2026-01-10 12:35:17] 2026-01-10 17:34:30,129 | INFO     | intersect: -2758858042.4876494
[2026-01-10 12:35:17] 2026-01-10 17:34:30,130 | INFO     | chi2: 0.0012938004724233033
[2026-01-10 12:35:17] 2026-01-10 17:34:30,130 | INFO     | current chi2=0.0012938004724233033 (change=15.237359393559952 %)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,130 | INFO     | left removable region: 50
[2026-01-10 12:35:17] 2026-01-10 17:34:30,130 | INFO     | sum of square deviations: 2555770710.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,131 | INFO     | sum of deviations: 4801777870.000001
[2026-01-10 12:35:17] 2026-01-10 17:34:30,131 | INFO     | mean x: 1768059912.5
[2026-01-10 12:35:17] 2026-01-10 17:34:30,131 | INFO     | mean y: 2498506.336633663
[2026-01-10 12:35:17] 2026-01-10 17:34:30,132 | INFO     | intersect: -3319329592.6385374
[2026-01-10 12:35:17] 2026-01-10 17:34:30,132 | INFO     | chi2: 0.001005195059497384
[2026-01-10 12:35:17] 2026-01-10 17:34:30,132 | INFO     | current memory leak: 1.88 B/s (using 202 data points, chi2=0.00)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,132 | INFO     | could have reported an average CPU frequency of 2355 MHz (12 samples)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | ..............................
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . Timing measurements:
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . get job = 0 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . initial setup = 2 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . payload setup = 6 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . stage-in = 0 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . payload execution = 15729 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . stage-out = 2 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | . log creation = 0 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,133 | INFO     | ..............................
[2026-01-10 12:35:17] 2026-01-10 17:34:30,662 | INFO     | 
[2026-01-10 12:35:17] 2026-01-10 17:34:30,662 | INFO     | job summary report
[2026-01-10 12:35:17] 2026-01-10 17:34:30,662 | INFO     | --------------------------------------------------
[2026-01-10 12:35:17] 2026-01-10 17:34:30,663 | INFO     | PanDA job id: 6965382762
[2026-01-10 12:35:17] 2026-01-10 17:34:30,663 | INFO     | task id: 47898826
[2026-01-10 12:35:17] 2026-01-10 17:34:30,663 | INFO     | errors: (none)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,663 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:35:17] 2026-01-10 17:34:30,663 | INFO     | pilot state: finished 
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | transexitcode: 0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | exeerrorcode: 0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | exeerrordiag: 
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | exitcode: 0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | exitmsg: OK
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | cpuconsumptiontime: 120179 s
[2026-01-10 12:35:17] 2026-01-10 17:34:30,664 | INFO     | nevents: 400
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | neventsw: 0
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | pid: 21939
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | pgrp: 21939
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | corecount: 8
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | event service: False
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | sizes: {0: 2283749, 1: 2283948, 5: 2284210, 11: 2284266, 15739: 2315387, 15742: 2324385, 15743: 2324597, 15749: 2324791}
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | --------------------------------------------------
[2026-01-10 12:35:17] 2026-01-10 17:34:30,665 | INFO     | 
[2026-01-10 12:35:17] 2026-01-10 17:34:30,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 12:35:17] 2026-01-10 17:34:30,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,690 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,690 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,691 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:35:17] 2026-01-10 17:34:30,694 | INFO     | job 6965382762 has completed (purged errors)
[2026-01-10 12:35:17] 2026-01-10 17:34:30,694 | INFO     | overall cleanup function is called
[2026-01-10 12:35:17] 2026-01-10 17:34:31,701 | INFO     | --- collectZombieJob: --- 10, [21939]
[2026-01-10 12:35:17] 2026-01-10 17:34:31,702 | INFO     | zombie collector waiting for pid 21939
[2026-01-10 12:35:17] 2026-01-10 17:34:31,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:35:17] 2026-01-10 17:34:31,702 | INFO     | collected zombie processes
[2026-01-10 12:35:17] 2026-01-10 17:34:31,702 | INFO     | will attempt to kill all subprocesses of pid=21939
[2026-01-10 12:35:17] 2026-01-10 17:34:31,802 | INFO     | process IDs to be killed: [21939] (in reverse order)
[2026-01-10 12:35:17] 2026-01-10 17:34:31,853 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:35:17] 2026-01-10 17:34:31,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:35:17] 2026-01-10 17:34:31,857 | INFO     | did not find any defunct processes belonging to 21939
[2026-01-10 12:35:17] 2026-01-10 17:34:31,860 | INFO     | did not find any defunct processes belonging to 21939
[2026-01-10 12:35:17] 2026-01-10 17:34:31,860 | INFO     | ready for new job
[2026-01-10 12:35:17] 2026-01-10 17:34:31,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:35:17] 2026-01-10 17:34:31,862 | INFO     | ***************************************
[2026-01-10 12:35:17] 2026-01-10 17:34:31,862 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:35:17] 2026-01-10 17:34:31,862 | INFO     | ***************************************
[2026-01-10 12:35:17] 2026-01-10 17:34:31,862 | INFO     | 
[2026-01-10 12:35:17] 2026-01-10 17:34:31,863 | INFO     | architecture information:
[2026-01-10 12:35:17] 2026-01-10 17:34:31,864 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:35:17] 2026-01-10 17:34:31,878 | INFO     | cat /etc/os-release:
[2026-01-10 12:35:17] NAME="CentOS Linux"
[2026-01-10 12:35:17] VERSION="7 (Core)"
[2026-01-10 12:35:17] ID="centos"
[2026-01-10 12:35:17] ID_LIKE="rhel fedora"
[2026-01-10 12:35:17] VERSION_ID="7"
[2026-01-10 12:35:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:35:17] ANSI_COLOR="0;31"
[2026-01-10 12:35:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:35:17] HOME_URL="https://www.centos.org/"
[2026-01-10 12:35:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:35:17] 
[2026-01-10 12:35:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:35:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:35:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:35:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:35:17] 
[2026-01-10 12:35:17] 2026-01-10 17:34:31,878 | INFO     | ***************************************
[2026-01-10 12:35:17] 2026-01-10 17:34:32,381 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 12:35:17] 2026-01-10 17:34:32,397 | INFO     | sufficient remaining disk space (28758245376 B)
[2026-01-10 12:35:17] 2026-01-10 17:34:32,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:35:17] 2026-01-10 17:34:32,398 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:35:17] 2026-01-10 17:34:32,398 | INFO     | update_server=False
[2026-01-10 12:35:17] 2026-01-10 17:34:32,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:35:17] 2026-01-10 17:34:32,887 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 12:35:17] 2026-01-10 17:34:32,888 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 12:35:17] 2026-01-10 17:34:32,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:35:17] 2026-01-10 17:34:32,888 | INFO     | will abort loop
[2026-01-10 12:35:17] 2026-01-10 17:34:33,081 | INFO     | all payload control threads have been joined
[2026-01-10 12:35:17] 2026-01-10 17:34:33,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:35:17] 2026-01-10 17:34:33,269 | INFO     | all data control threads have been joined
[2026-01-10 12:35:17] 2026-01-10 17:34:33,400 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:33,490 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:33,800 | INFO     | all job control threads have been joined
[2026-01-10 12:35:17] 2026-01-10 17:34:33,893 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,017 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,086 | INFO     | [payload] control thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,094 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,153 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,274 | INFO     | [data] control thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,513 | INFO     | [job] validate thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:35:17] 2026-01-10 17:34:34,802 | INFO     | [job] control thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,860 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:34,967 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:35,168 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:35,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:35:17] 2026-01-10 17:34:36,230 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:34:38,750 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:35:17] 2026-01-10 17:35:02,223 | INFO     | PID=3355 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 12:35:17] 2026-01-10 17:35:02,223 | INFO     | .. there are 2 such processes running
[2026-01-10 12:35:17] 2026-01-10 17:35:02,224 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:35:17] 2026-01-10 17:35:02,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:35:17] 2026-01-10 17:35:02,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:35:17] 2026-01-10 17:35:11,299 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:35:17] 2026-01-10 17:35:12,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463681873728)>', '<ExcThread(monitor, started 140462811772672)>']
[2026-01-10 12:35:17] 2026-01-10 17:35:13,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:35:17] 2026-01-10 17:35:13,276 | INFO     | [monitor] control thread has ended
[2026-01-10 12:35:17] 2026-01-10 17:35:17,564 | INFO     | all workflow threads have been joined
[2026-01-10 12:35:17] 2026-01-10 17:35:17,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:35:17] 2026-01-10 17:35:17,565 | INFO     | traces error code: 0
[2026-01-10 12:35:17] 2026-01-10 17:35:17,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:35:17] 2026-01-10 17:35:17,657 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:35:17] 2026-01-10 17:35:17,661 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:35:17] 2026-01-10 17:35:17,664 [wrapper] pilotpid: 3355
[2026-01-10 12:35:17] 2026-01-10 17:35:17,667 [wrapper] Pilot exit status: 0
[2026-01-10 12:35:17] 2026-01-10 17:35:17,680 [wrapper] pandaids: 6965382762
[2026-01-10 12:35:17] 2026-01-10 17:35:17,723 [wrapper] cleanup supervisor_pilot  8928 3356
[2026-01-10 12:35:17] 2026-01-10 17:35:17,728 [wrapper] Test setup, not cleaning
[2026-01-10 12:35:17] 2026-01-10 17:35:17,732 [wrapper] apfmon messages muted
[2026-01-10 12:35:17] 2026-01-10 17:35:17,735 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:35:17] 2026-01-10 17:35:17,739 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:35:17]  *** Error codes and diagnostics ***
[2026-01-10 12:35:17]     "exeErrorCode": 0,
[2026-01-10 12:35:17]     "exeErrorDiag": "",
[2026-01-10 12:35:17]     "pilotErrorCode": 0,
[2026-01-10 12:35:17]     "pilotErrorDiag": "",
[2026-01-10 12:35:17]  *** Listing of results directory ***
[2026-01-10 12:35:17] total 439816
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 12:35:17] -rwx------ 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:35:17] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:11 run_atlas
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:11 job.xml
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas 225375267 Jan 10 08:11 EVNT.47898824._001122.pool.root.1
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:11 start_atlas.sh
[2026-01-10 12:35:17] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:11 shared
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas    592403 Jan 10 08:11 input.tar.gz
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:11 boinc_lockfile
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas      2519 Jan 10 08:11 pandaJob.out
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas        57 Jan 10 08:11 setup.sh.local
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas    989556 Jan 10 08:11 agis_schedconf.cvmfs.json
[2026-01-10 12:35:17] drwx------ 5 boincer umatlas      4096 Jan 10 08:11 pilot3
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas      5953 Jan 10 12:28 init_data.xml
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas 215722252 Jan 10 12:33 HITS.47898826._040338.pool.root.1
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas       532 Jan 10 12:34 boinc_task_state.xml
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas      1064 Jan 10 12:34 memory_monitor_summary.json
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas   1516240 Jan 10 12:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas    484631 Jan 10 12:34 log.47898826._040338.job.log.tgz.1
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas      7857 Jan 10 12:34 heartbeat.json
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas        95 Jan 10 12:35 pilot_heartbeat.json
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 12:35 boinc_mmap_file
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas        29 Jan 10 12:35 wrapper_checkpoint.txt
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas      5006 Jan 10 12:35 pilotlog.txt
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas   2193231 Jan 10 12:35 log.47898826._040338.job.log.1
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas       357 Jan 10 12:35 output.list
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas       620 Jan 10 12:35 runtime_log
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas   2693120 Jan 10 12:35 result.tar.gz
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 12:35 runtime_log.err
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas       663 Jan 10 12:35 rJDODmTuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpUhKDmAUzm5m.diag
[2026-01-10 12:35:17] -rw-r--r-- 1 boincer umatlas     20936 Jan 10 12:35 stderr.txt
[2026-01-10 12:35:17] HITS file was successfully produced:
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas 215722252 Jan 10 12:33 shared/HITS.pool.root.1
[2026-01-10 12:35:17]  *** Contents of shared directory: ***
[2026-01-10 12:35:17] total 434000
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas 225375267 Jan 10 08:11 ATLAS.root_0
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:11 start_atlas.sh
[2026-01-10 12:35:17] -rw-r--r-- 2 boincer umatlas    592403 Jan 10 08:11 input.tar.gz
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas 215722252 Jan 10 12:33 HITS.pool.root.1
[2026-01-10 12:35:17] -rw------- 1 boincer umatlas   2693120 Jan 10 12:35 result.tar.gz
12:35:19 (28574): run_atlas exited; CPU time 120367.751977
12:35:19 (28574): called boinc_finish(0)

</stderr_txt>
]]>

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