Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:45:19 (1989500): wrapper (7.7.26015): starting
13:45:19 (1989500): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 13:45:19] Arguments: --nthreads 12
[2026-01-11 13:45:19] Threads: 12
[2026-01-11 13:45:19] Checking for CVMFS
[2026-01-11 13:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 13:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 13:45:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 13:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 13:45:20] 2.13.3.0 36987 5770 104036 155017 2 59 35816286 46080000 922 130560 0 9228669 99.995 215508 24559 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 13:45:20] CVMFS is ok
[2026-01-11 13:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 13:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 13:45:20] Further information can be found at the LHC@home message board.
[2026-01-11 13:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 13:45:20] Checking for apptainer binary...
[2026-01-11 13:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 13:45:20] Running /usr/bin/apptainer --version
[2026-01-11 13:45:20] apptainer version 1.4.5-2.el9
[2026-01-11 13:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 13:45:20] minis01.farm.particle.cz
[2026-01-11 13:45:20] apptainer works
[2026-01-11 13:45:20] Set ATHENA_PROC_NUMBER=12
[2026-01-11 13:45:20] Set ATHENA_CORE_NUMBER=12
[2026-01-11 13:45:20] Starting ATLAS job with PandaID=6965382746
[2026-01-11 13:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 15:00:49]  *** The last 200 lines of the pilot log: ***
[2026-01-11 15:00:49]  protocol_id=None
[2026-01-11 15:00:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 15:00:49]  replicas=None
[2026-01-11 15:00:49]  scope=mc23_13p6TeV
[2026-01-11 15:00:49]  status=None
[2026-01-11 15:00:49]  status_code=0
[2026-01-11 15:00:49]  storage_token=
[2026-01-11 15:00:49]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965382746/log.47898826._040322.job.log.tgz.1
[2026-01-11 15:00:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/d6/log.47898826._040322.job.log.tgz.1
[2026-01-11 15:00:49]  workdir=None
[2026-01-11 15:00:49] ]
[2026-01-11 15:00:49] 2026-01-11 14:00:11,127 | INFO     | transferring file log.47898826._040322.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965382746/log.47898826._040322.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 15:00:49] 2026-01-11 14:00:11,127 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965382746/log.47898826._040322.job.log.tgz.1 /var/lib/boinc/slots/0/log.47898826._040322.job
[2026-01-11 15:00:49] 2026-01-11 14:00:11,143 | INFO     | adding to output.list: log.47898826._040322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/d6/log.47898826._040322.job.log.tg
[2026-01-11 15:00:49] 2026-01-11 14:00:11,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 15:00:49] 2026-01-11 14:00:11,144 | INFO     | summary of transferred files:
[2026-01-11 15:00:49] 2026-01-11 14:00:11,144 | INFO     |  -- lfn=log.47898826._040322.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 15:00:49] 2026-01-11 14:00:11,145 | INFO     | stage-out finished correctly
[2026-01-11 15:00:49] 2026-01-11 14:00:12,128 | INFO     | time since job start (4483s) is within the limit (349056.0s)
[2026-01-11 15:00:49] 2026-01-11 14:00:12,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 15:00:49] 2026-01-11 14:00:13,211 | INFO     | monitor loop #339: job 0:6965382746 is in state 'finished'
[2026-01-11 15:00:49] 2026-01-11 14:00:13,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 15:00:49] 2026-01-11 14:00:13,318 | INFO     | PID=1993391 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 15:00:49] 2026-01-11 14:00:13,318 | INFO     | .. there are 2 such processes running
[2026-01-11 15:00:49] 2026-01-11 14:00:13,860 | INFO     | job 6965382746 has state=finished
[2026-01-11 15:00:49] 2026-01-11 14:00:13,861 | INFO     | preparing for final server update for job 6965382746 in state='finished'
[2026-01-11 15:00:49] 2026-01-11 14:00:13,861 | INFO     | this job has now completed (state=finished)
[2026-01-11 15:00:49] 2026-01-11 14:00:13,861 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 15:00:49] 2026-01-11 14:00:13,862 | INFO     | log transfer has been attempted: DONE
[2026-01-11 15:00:49] 2026-01-11 14:00:13,862 | INFO     | job 6965382746 has finished - writing final server update
[2026-01-11 15:00:49] 2026-01-11 14:00:13,862 | INFO     | total number of processed events: 400 (read)
[2026-01-11 15:00:49] 2026-01-11 14:00:13,863 | INFO     | executing command: lscpu
[2026-01-11 15:00:49] 2026-01-11 14:00:13,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 15:00:49] 2026-01-11 14:00:14,319 | INFO     | time since job start (4485s) is within the limit (349056.0s)
[2026-01-11 15:00:49] 2026-01-11 14:00:15,715 | INFO     | monitor loop #340: job 0:6965382746 is in state 'finished'
[2026-01-11 15:00:49] 2026-01-11 14:00:15,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 15:00:49] 2026-01-11 14:00:16,324 | INFO     | time since job start (4487s) is within the limit (349056.0s)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,340 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 15:00:49] 2026-01-11 14:00:17,344 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2811.9150000000004
[2026-01-11 15:00:49] 2026-01-11 14:00:17,349 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965382746/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,350 | INFO     | extracted standard info from prmon json
[2026-01-11 15:00:49] 2026-01-11 14:00:17,350 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 15:00:49] 2026-01-11 14:00:17,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 15:00:49] 2026-01-11 14:00:17,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 15:00:49] 2026-01-11 14:00:17,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | fitting pss+swap vs Time
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | sum of square deviations: 93240818.0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | sum of deviations: -4698949560.0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | mean x: 1768137871.0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | mean y: 2787273.9850746267
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | intersect: 89109584588.3843
[2026-01-11 15:00:49] 2026-01-11 14:00:17,352 | INFO     | chi2: 0.039518118212290655
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | current memory leak: -50.40 B/s (using 67 data points, chi2=0.04)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | could have reported an average CPU frequency of 2803 MHz (6 samples)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | ..............................
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . Timing measurements:
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . get job = 0 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . initial setup = 1 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . payload setup = 5 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . stage-in = 0 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . payload execution = 4457 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . stage-out = 0 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,353 | INFO     | . log creation = 0 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,354 | INFO     | ..............................
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | 
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | job summary report
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | --------------------------------------------------
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | PanDA job id: 6965382746
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | task id: 47898826
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | errors: (none)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | pilot state: finished 
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | transexitcode: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,787 | INFO     | exeerrorcode: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | exeerrordiag: 
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | exitcode: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | exitmsg: OK
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | cpuconsumptiontime: 47014 s
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | nevents: 400
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | neventsw: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | pid: 2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | pgrp: 2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | corecount: 12
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | event service: False
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | sizes: {0: 2283916, 4: 2284178, 11: 2284206, 4466: 2310420, 4468: 2319418, 4469: 2319474, 4474: 2319796}
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | --------------------------------------------------
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | 
[2026-01-11 15:00:49] 2026-01-11 14:00:17,788 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 15:00:49] 2026-01-11 14:00:17,805 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,805 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,805 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,805 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 15:00:49] 2026-01-11 14:00:17,807 | INFO     | job 6965382746 has completed (purged errors)
[2026-01-11 15:00:49] 2026-01-11 14:00:17,808 | INFO     | overall cleanup function is called
[2026-01-11 15:00:49] 2026-01-11 14:00:18,816 | INFO     | --- collectZombieJob: --- 10, [2000072]
[2026-01-11 15:00:49] 2026-01-11 14:00:18,816 | INFO     | zombie collector waiting for pid 2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:18,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 15:00:49] 2026-01-11 14:00:18,816 | INFO     | collected zombie processes
[2026-01-11 15:00:49] 2026-01-11 14:00:18,817 | INFO     | will attempt to kill all subprocesses of pid=2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:18,950 | INFO     | process IDs to be killed: [2000072] (in reverse order)
[2026-01-11 15:00:49] 2026-01-11 14:00:19,000 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 15:00:49] 2026-01-11 14:00:19,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 15:00:49] 2026-01-11 14:00:19,005 | INFO     | did not find any defunct processes belonging to 2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:19,009 | INFO     | did not find any defunct processes belonging to 2000072
[2026-01-11 15:00:49] 2026-01-11 14:00:19,009 | INFO     | ready for new job
[2026-01-11 15:00:49] 2026-01-11 14:00:19,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 15:00:49] 2026-01-11 14:00:19,011 | INFO     | ***************************************
[2026-01-11 15:00:49] 2026-01-11 14:00:19,011 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 15:00:49] 2026-01-11 14:00:19,011 | INFO     | ***************************************
[2026-01-11 15:00:49] 2026-01-11 14:00:19,011 | INFO     | 
[2026-01-11 15:00:49] 2026-01-11 14:00:19,013 | INFO     | architecture information:
[2026-01-11 15:00:49] 2026-01-11 14:00:19,013 | INFO     | executing command: cat /etc/os-release
[2026-01-11 15:00:49] 2026-01-11 14:00:19,026 | INFO     | cat /etc/os-release:
[2026-01-11 15:00:49] NAME="CentOS Linux"
[2026-01-11 15:00:49] VERSION="7 (Core)"
[2026-01-11 15:00:49] ID="centos"
[2026-01-11 15:00:49] ID_LIKE="rhel fedora"
[2026-01-11 15:00:49] VERSION_ID="7"
[2026-01-11 15:00:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 15:00:49] ANSI_COLOR="0;31"
[2026-01-11 15:00:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 15:00:49] HOME_URL="https://www.centos.org/"
[2026-01-11 15:00:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 15:00:49] 
[2026-01-11 15:00:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 15:00:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 15:00:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 15:00:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 15:00:49] 
[2026-01-11 15:00:49] 2026-01-11 14:00:19,026 | INFO     | ***************************************
[2026-01-11 15:00:49] 2026-01-11 14:00:19,528 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 15:00:49] 2026-01-11 14:00:19,542 | INFO     | sufficient remaining disk space (70421315584 B)
[2026-01-11 15:00:49] 2026-01-11 14:00:19,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 15:00:49] 2026-01-11 14:00:19,542 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 15:00:49] 2026-01-11 14:00:19,542 | INFO     | update_server=False
[2026-01-11 15:00:49] 2026-01-11 14:00:19,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 15:00:49] 2026-01-11 14:00:19,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 15:00:49] 2026-01-11 14:00:19,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 15:00:49] 2026-01-11 14:00:19,543 | INFO     | aborting loop
[2026-01-11 15:00:49] 2026-01-11 14:00:20,445 | INFO     | all payload control threads have been joined
[2026-01-11 15:00:49] 2026-01-11 14:00:20,548 | INFO     | [job] retrieve thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:20,549 | INFO     | [job] job monitor thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:20,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:20,623 | INFO     | all data control threads have been joined
[2026-01-11 15:00:49] 2026-01-11 14:00:20,691 | INFO     | [payload] failed_post thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:20,721 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,174 | INFO     | all job control threads have been joined
[2026-01-11 15:00:49] 2026-01-11 14:00:21,329 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,450 | INFO     | [payload] control thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,549 | INFO     | [data] copytool_out thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,563 | INFO     | [data] copytool_in thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,628 | INFO     | [data] control thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,882 | INFO     | [job] validate thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:21,955 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:22,098 | INFO     | [payload] validate_post thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:22,179 | INFO     | [job] control thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:22,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 15:00:49] 2026-01-11 14:00:22,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 15:00:49] 2026-01-11 14:00:23,439 | INFO     | [job] queue monitor thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:26,782 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 15:00:49] 2026-01-11 14:00:27,209 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-11 15:00:49] 2026-01-11 14:00:35,417 | INFO     | [monitor] cgroup control has ended
[2026-01-11 15:00:49] 2026-01-11 14:00:37,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699308861248)>', '<ExcThread(monitor, started 139698945111808)>']
[2026-01-11 15:00:49] 2026-01-11 14:00:42,256 | INFO     | all workflow threads have been joined
[2026-01-11 15:00:49] 2026-01-11 14:00:42,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 15:00:49] 2026-01-11 14:00:42,257 | INFO     | traces error code: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:42,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 15:00:49] 2026-01-11 14:00:49,584 | INFO     | PID=1993391 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 15:00:49] 2026-01-11 14:00:49,584 | INFO     | .. there are 2 such processes running
[2026-01-11 15:00:49] 2026-01-11 14:00:49,585 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 15:00:49] 2026-01-11 14:00:49,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 15:00:49] 2026-01-11 14:00:49,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 15:00:49] 2026-01-11 14:00:49,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 15:00:49] 2026-01-11 14:00:49,585 | INFO     | [monitor] control thread has ended
[2026-01-11 15:00:49] 2026-01-11 14:00:49,690 [wrapper] ==== pilot stdout END ====
[2026-01-11 15:00:49] 2026-01-11 14:00:49,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 15:00:49] 2026-01-11 14:00:49,695 [wrapper] pilotpid: 1993391
[2026-01-11 15:00:49] 2026-01-11 14:00:49,698 [wrapper] Pilot exit status: 0
[2026-01-11 15:00:49] 2026-01-11 14:00:49,709 [wrapper] pandaids: 6965382746
[2026-01-11 15:00:49] 2026-01-11 14:00:49,747 [wrapper] cleanup supervisor_pilot 2074350 1993392
[2026-01-11 15:00:49] 2026-01-11 14:00:49,750 [wrapper] Test setup, not cleaning
[2026-01-11 15:00:49] 2026-01-11 14:00:49,753 [wrapper] apfmon messages muted
[2026-01-11 15:00:49] 2026-01-11 14:00:49,755 [wrapper] ==== wrapper stdout END ====
[2026-01-11 15:00:49] 2026-01-11 14:00:49,758 [wrapper] ==== wrapper stderr END ====
[2026-01-11 15:00:49]  *** Error codes and diagnostics ***
[2026-01-11 15:00:49]     "exeErrorCode": 0,
[2026-01-11 15:00:49]     "exeErrorDiag": "",
[2026-01-11 15:00:49]     "pilotErrorCode": 0,
[2026-01-11 15:00:49]     "pilotErrorDiag": "",
[2026-01-11 15:00:49]  *** Listing of results directory ***
[2026-01-11 15:00:49] total 434856
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:09 queuedata.json
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-11 15:00:49] -rwx------. 1 boinc boinc     36322 Jan 10 14:10 runpilot2-wrapper.sh
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc       100 Jan 11 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 15:00:49] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 13:45 run_atlas
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc       105 Jan 11 13:45 job.xml
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc      6523 Jan 11 13:45 init_data.xml
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc 225110247 Jan 11 13:45 EVNT.47898824._000823.pool.root.1
[2026-01-11 15:00:49] drwxrwx--x. 2 boinc boinc      4096 Jan 11 13:45 shared
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc    592401 Jan 11 13:45 input.tar.gz
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc     15847 Jan 11 13:45 start_atlas.sh
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc         0 Jan 11 13:45 boinc_lockfile
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc      2517 Jan 11 13:45 pandaJob.out
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc    989548 Jan 11 13:45 agis_schedconf.cvmfs.json
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc   1516240 Jan 11 13:45 agis_ddmendpoints.agis.ALL.json
[2026-01-11 15:00:49] drwx------. 5 boinc boinc      4096 Jan 11 13:45 pilot3
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc 214196296 Jan 11 14:59 HITS.47898826._040322.pool.root.1
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc       529 Jan 11 14:59 boinc_task_state.xml
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc      1012 Jan 11 15:00 memory_monitor_summary.json
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc    368304 Jan 11 15:00 log.47898826._040322.job.log.tgz.1
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc      7771 Jan 11 15:00 heartbeat.json
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc      8192 Jan 11 15:00 boinc_mmap_file
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc        27 Jan 11 15:00 wrapper_checkpoint.txt
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc        95 Jan 11 15:00 pilot_heartbeat.json
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc       822 Jan 11 15:00 pilotlog.txt
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc    668689 Jan 11 15:00 log.47898826._040322.job.log.1
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc       357 Jan 11 15:00 output.list
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc       620 Jan 11 15:00 runtime_log
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc   1054720 Jan 11 15:00 result.tar.gz
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc      8864 Jan 11 15:00 runtime_log.err
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc       662 Jan 11 15:00 5p2NDmTuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhUhKDmaecglm.diag
[2026-01-11 15:00:49] -rw-r--r--. 1 boinc boinc     21907 Jan 11 15:00 stderr.txt
[2026-01-11 15:00:49] HITS file was successfully produced:
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc 214196296 Jan 11 14:59 shared/HITS.pool.root.1
[2026-01-11 15:00:49]  *** Contents of shared directory: ***
[2026-01-11 15:00:49] total 430652
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc 225110247 Jan 11 13:45 ATLAS.root_0
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc    592401 Jan 11 13:45 input.tar.gz
[2026-01-11 15:00:49] -rw-r--r--. 2 boinc boinc     15847 Jan 11 13:45 start_atlas.sh
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc 214196296 Jan 11 14:59 HITS.pool.root.1
[2026-01-11 15:00:49] -rw-------. 1 boinc boinc   1054720 Jan 11 15:00 result.tar.gz
15:00:51 (1989500): run_atlas exited; CPU time 47072.932144
15:00:51 (1989500): called boinc_finish(0)

</stderr_txt>
]]>

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