Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:20 (3414708): wrapper (7.7.26015): starting
08:11:20 (3414708): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:11:20] Arguments: --nthreads 8
[2026-01-10 08:11:20] Threads: 8
[2026-01-10 08:11:20] Checking for CVMFS
[2026-01-10 08:11:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:11:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:11:20] 2.13.3.0 11820 24359 141836 154980 2 70 31054318 40960001 21996 16776704 0 37761333 99.780 25370975 48651 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:11:20] CVMFS is ok
[2026-01-10 08:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:11:20] Further information can be found at the LHC@home message board.
[2026-01-10 08:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:11:20] Checking for apptainer binary...
[2026-01-10 08:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:11:20] Running /usr/bin/apptainer --version
[2026-01-10 08:11:20] apptainer version 1.4.5-2.el9
[2026-01-10 08:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:11:21] c-212-10.aglt2.org
[2026-01-10 08:11:21] apptainer works
[2026-01-10 08:11:21] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:11:21] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:11:21] Starting ATLAS job with PandaID=6965382716
[2026-01-10 08:11:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:11:58]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:11:58] 2026-01-10 15:11:24,381 | INFO     | time since job start (7193s) is within the limit (349056.0s)
[2026-01-10 10:11:58] 2026-01-10 15:11:24,974 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 10:11:58] 2026-01-10 15:11:24,979 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3187.925104166669
[2026-01-10 10:11:58] 2026-01-10 15:11:24,992 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965382716/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:11:58] 2026-01-10 15:11:24,993 | INFO     | extracted standard info from prmon json
[2026-01-10 10:11:58] 2026-01-10 15:11:24,993 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:11:58] 2026-01-10 15:11:24,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:11:58] 2026-01-10 15:11:24,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:11:58] 2026-01-10 15:11:24,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:11:58] 2026-01-10 15:11:24,995 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:11:58] 2026-01-10 15:11:24,996 | INFO     | sum of square deviations: 509440249.5
[2026-01-10 10:11:58] 2026-01-10 15:11:24,996 | INFO     | sum of deviations: 17929665004.5
[2026-01-10 10:11:58] 2026-01-10 15:11:24,996 | INFO     | mean x: 1768054285.5
[2026-01-10 10:11:58] 2026-01-10 15:11:24,996 | INFO     | mean y: 2470977.381355932
[2026-01-10 10:11:58] 2026-01-10 15:11:24,996 | INFO     | intersect: -62223906070.56253
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | chi2: 2.407012919080196
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | sum of square deviations: 447383272.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | sum of deviations: 25111763860.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | mean x: 1768054133.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | mean y: 2487950.8584070797
[2026-01-10 10:11:58] 2026-01-10 15:11:24,997 | INFO     | intersect: -99238946985.03036
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | chi2: 1.5943505652616183
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | current chi2=1.5943505652616183 (change=33.76227636240209 %)
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | sum of square deviations: 390582207.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | sum of deviations: 23834935649.999996
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | mean x: 1768053980.5
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | mean y: 2484520.5555555555
[2026-01-10 10:11:58] 2026-01-10 15:11:24,998 | INFO     | intersect: -107891454567.5193
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | chi2: 1.5915405470760486
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | current chi2=1.5915405470760486 (change=0.17624845167653563 %)
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | right removable region: 107
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | sum of square deviations: 447383272.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | sum of deviations: -495052454.00000095
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | mean x: 1768054438.0
[2026-01-10 10:11:58] 2026-01-10 15:11:24,999 | INFO     | mean y: 2515773.663716814
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | intersect: 1958958365.7718377
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | chi2: 1.0983902153080098
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | current chi2=1.0983902153080098 (change=54.36708267740651 %)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | sum of square deviations: 390582207.0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | sum of deviations: -9385135175.0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,000 | INFO     | mean x: 1768054590.5
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | mean y: 2539518.6666666665
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | intersect: 42486377827.82387
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | chi2: 0.8638049344254695
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | current chi2=0.8638049344254695 (change=21.35718960467598 %)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | left removable region: 20
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | sum of square deviations: 204163828.0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | sum of deviations: -3210008551.0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | mean x: 1768054560.0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | mean y: 2566918.3218390807
[2026-01-10 10:11:58] 2026-01-10 15:11:25,001 | INFO     | intersect: 27801175084.282276
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | chi2: 0.00728375535566733
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | current memory leak: -15.72 B/s (using 87 data points, chi2=0.01)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | could have reported an average CPU frequency of 3150 MHz (7 samples)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | ..............................
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . Timing measurements:
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . get job = 0 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . initial setup = 2 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . payload setup = 5 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . stage-in = 0 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . payload execution = 7163 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,002 | INFO     | . stage-out = 0 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,003 | INFO     | . log creation = 0 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,003 | INFO     | ..............................
[2026-01-10 10:11:58] 2026-01-10 15:11:25,073 | INFO     | 
[2026-01-10 10:11:58] 2026-01-10 15:11:25,073 | INFO     | job summary report
[2026-01-10 10:11:58] 2026-01-10 15:11:25,073 | INFO     | --------------------------------------------------
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | PanDA job id: 6965382716
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | task id: 47898826
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | errors: (none)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | pilot state: finished 
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | transexitcode: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | exeerrorcode: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | exeerrordiag: 
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | exitcode: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | exitmsg: OK
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | cpuconsumptiontime: 43392 s
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | nevents: 400
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | neventsw: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | pid: 3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | pgrp: 3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | corecount: 8
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | event service: False
[2026-01-10 10:11:58] 2026-01-10 15:11:25,074 | INFO     | sizes: {0: 2283918, 4: 2284180, 11: 2284208, 7172: 2311536, 7173: 2320534, 7174: 2320590, 7178: 2320912}
[2026-01-10 10:11:58] 2026-01-10 15:11:25,075 | INFO     | --------------------------------------------------
[2026-01-10 10:11:58] 2026-01-10 15:11:25,075 | INFO     | 
[2026-01-10 10:11:58] 2026-01-10 15:11:25,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 10:11:58] 2026-01-10 15:11:25,091 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | job 6965382716 has completed (purged errors)
[2026-01-10 10:11:58] 2026-01-10 15:11:25,093 | INFO     | overall cleanup function is called
[2026-01-10 10:11:58] 2026-01-10 15:11:26,100 | INFO     | --- collectZombieJob: --- 10, [3437606]
[2026-01-10 10:11:58] 2026-01-10 15:11:26,100 | INFO     | zombie collector waiting for pid 3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:26,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:11:58] 2026-01-10 15:11:26,100 | INFO     | collected zombie processes
[2026-01-10 10:11:58] 2026-01-10 15:11:26,100 | INFO     | will attempt to kill all subprocesses of pid=3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:26,419 | INFO     | process IDs to be killed: [3437606] (in reverse order)
[2026-01-10 10:11:58] 2026-01-10 15:11:26,540 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:11:58] 2026-01-10 15:11:26,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:11:58] 2026-01-10 15:11:26,552 | INFO     | did not find any defunct processes belonging to 3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:26,564 | INFO     | did not find any defunct processes belonging to 3437606
[2026-01-10 10:11:58] 2026-01-10 15:11:26,564 | INFO     | ready for new job
[2026-01-10 10:11:58] 2026-01-10 15:11:26,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:11:58] 2026-01-10 15:11:26,566 | INFO     | ***************************************
[2026-01-10 10:11:58] 2026-01-10 15:11:26,566 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:11:58] 2026-01-10 15:11:26,566 | INFO     | ***************************************
[2026-01-10 10:11:58] 2026-01-10 15:11:26,566 | INFO     | 
[2026-01-10 10:11:58] 2026-01-10 15:11:26,571 | INFO     | architecture information:
[2026-01-10 10:11:58] 2026-01-10 15:11:26,571 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:11:58] 2026-01-10 15:11:26,584 | INFO     | cat /etc/os-release:
[2026-01-10 10:11:58] NAME="CentOS Linux"
[2026-01-10 10:11:58] VERSION="7 (Core)"
[2026-01-10 10:11:58] ID="centos"
[2026-01-10 10:11:58] ID_LIKE="rhel fedora"
[2026-01-10 10:11:58] VERSION_ID="7"
[2026-01-10 10:11:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:11:58] ANSI_COLOR="0;31"
[2026-01-10 10:11:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:11:58] HOME_URL="https://www.centos.org/"
[2026-01-10 10:11:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:11:58] 
[2026-01-10 10:11:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:11:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:11:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:11:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:11:58] 
[2026-01-10 10:11:58] 2026-01-10 15:11:26,584 | INFO     | ***************************************
[2026-01-10 10:11:58] 2026-01-10 15:11:27,087 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 10:11:58] 2026-01-10 15:11:27,104 | INFO     | sufficient remaining disk space (126741381120 B)
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | INFO     | update_server=False
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:58] 2026-01-10 15:11:27,105 | INFO     | aborting loop
[2026-01-10 10:11:58] 2026-01-10 15:11:27,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:11:58] 2026-01-10 15:11:27,508 | INFO     | all data control threads have been joined
[2026-01-10 10:11:58] 2026-01-10 15:11:27,888 | INFO     | all payload control threads have been joined
[2026-01-10 10:11:58] 2026-01-10 15:11:28,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:11:58] 2026-01-10 15:11:28,110 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,111 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,156 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,217 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,514 | INFO     | [data] control thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,520 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:28,800 | INFO     | all job control threads have been joined
[2026-01-10 10:11:58] 2026-01-10 15:11:28,871 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-01-10 10:11:58] 2026-01-10 15:11:28,894 | INFO     | [payload] control thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:29,016 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:29,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:29,242 | INFO     | [job] validate thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:29,336 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:29,806 | INFO     | [job] control thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:30,057 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:30,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:58] 2026-01-10 15:11:31,089 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:31,114 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:11:58] 2026-01-10 15:11:42,847 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:11:58] 2026-01-10 15:11:44,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852492949312)>', '<ExcThread(monitor, started 139852137862912)>']
[2026-01-10 10:11:58] 2026-01-10 15:11:49,239 | INFO     | all workflow threads have been joined
[2026-01-10 10:11:58] 2026-01-10 15:11:49,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:11:58] 2026-01-10 15:11:49,240 | INFO     | traces error code: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:49,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:11:58] 2026-01-10 15:11:57,825 | INFO     | PID=3420442 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:11:58] 2026-01-10 15:11:57,825 | INFO     | .. there are 16 such processes running
[2026-01-10 10:11:58] 2026-01-10 15:11:57,826 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:11:58] 2026-01-10 15:11:57,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:11:58] 2026-01-10 15:11:57,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:11:58] 2026-01-10 15:11:57,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:11:58] 2026-01-10 15:11:57,826 | INFO     | [monitor] control thread has ended
[2026-01-10 10:11:58] 2026-01-10 15:11:57,955 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:11:58] 2026-01-10 15:11:57,958 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:11:58] 2026-01-10 15:11:57,961 [wrapper] pilotpid: 3420442
[2026-01-10 10:11:58] 2026-01-10 15:11:57,964 [wrapper] Pilot exit status: 0
[2026-01-10 10:11:58] 2026-01-10 15:11:57,975 [wrapper] pandaids: 6965382716
[2026-01-10 10:11:58] 2026-01-10 15:11:58,062 [wrapper] cleanup supervisor_pilot 3671384 3420443
[2026-01-10 10:11:58] 2026-01-10 15:11:58,066 [wrapper] Test setup, not cleaning
[2026-01-10 10:11:58] 2026-01-10 15:11:58,069 [wrapper] apfmon messages muted
[2026-01-10 10:11:58] 2026-01-10 15:11:58,072 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:11:58] 2026-01-10 15:11:58,075 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:11:58]  *** Error codes and diagnostics ***
[2026-01-10 10:11:58]     "exeErrorCode": 0,
[2026-01-10 10:11:58]     "exeErrorDiag": "",
[2026-01-10 10:11:58]     "pilotErrorCode": 0,
[2026-01-10 10:11:58]     "pilotErrorDiag": "",
[2026-01-10 10:11:58]  *** Listing of results directory ***
[2026-01-10 10:11:58] total 438228
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 10:11:58] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:11:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:11 run_atlas
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:11 job.xml
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas 226962225 Jan 10 08:11 EVNT.47898824._001055.pool.root.1
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:11 start_atlas.sh
[2026-01-10 10:11:58] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:11 shared
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas    592408 Jan 10 08:11 input.tar.gz
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:11 boinc_lockfile
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 08:11 pandaJob.out
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas        57 Jan 10 08:11 setup.sh.local
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas    989556 Jan 10 08:11 agis_schedconf.cvmfs.json
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:11:58] drwx------. 5 boincer umatlas      4096 Jan 10 08:11 pilot3
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas      6957 Jan 10 10:04 init_data.xml
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas 215127297 Jan 10 10:10 HITS.47898826._040292.pool.root.1
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas       529 Jan 10 10:10 boinc_task_state.xml
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas      1027 Jan 10 10:11 memory_monitor_summary.json
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas    356205 Jan 10 10:11 log.47898826._040292.job.log.tgz.1
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas      7766 Jan 10 10:11 heartbeat.json
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:11 boinc_mmap_file
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:11 wrapper_checkpoint.txt
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas        95 Jan 10 10:11 pilot_heartbeat.json
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas       823 Jan 10 10:11 pilotlog.txt
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas   1017046 Jan 10 10:11 log.47898826._040292.job.log.1
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas       357 Jan 10 10:11 output.list
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:11 runtime_log
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas   1392640 Jan 10 10:11 result.tar.gz
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas       652 Jan 10 10:11 TflNDmTuny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUUhKDmRL7jWm.diag
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 10:11 runtime_log.err
[2026-01-10 10:11:58] -rw-r--r--. 1 boincer umatlas     21055 Jan 10 10:11 stderr.txt
[2026-01-10 10:11:58] HITS file was successfully produced:
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas 215127297 Jan 10 10:10 shared/HITS.pool.root.1
[2026-01-10 10:11:58]  *** Contents of shared directory: ***
[2026-01-10 10:11:58] total 433692
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas 226962225 Jan 10 08:11 ATLAS.root_0
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:11 start_atlas.sh
[2026-01-10 10:11:58] -rw-r--r--. 2 boincer umatlas    592408 Jan 10 08:11 input.tar.gz
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas 215127297 Jan 10 10:10 HITS.pool.root.1
[2026-01-10 10:11:58] -rw-------. 1 boincer umatlas   1392640 Jan 10 10:11 result.tar.gz
10:11:59 (3414708): run_atlas exited; CPU time 43555.674179
10:11:59 (3414708): called boinc_finish(0)

</stderr_txt>
]]>

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