Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:54:49 (775517): wrapper (7.7.26015): starting
09:54:49 (775517): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:54:49] Arguments: --nthreads 8
[2026-01-10 09:54:49] Threads: 8
[2026-01-10 09:54:49] Checking for CVMFS
[2026-01-10 09:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:54:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:54:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:54:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:54:51] 2.13.3.0 11442 94995 406116 154982 2 96 19792815 32935936 11550 16776704 17 359390467 99.467 502094938 38946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 09:54:51] CVMFS is ok
[2026-01-10 09:54:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:54:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:54:51] Further information can be found at the LHC@home message board.
[2026-01-10 09:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:54:51] Checking for apptainer binary...
[2026-01-10 09:54:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:54:51] Running /usr/bin/apptainer --version
[2026-01-10 09:54:51] apptainer version 1.4.5-2.el9
[2026-01-10 09:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:54:52] c7-11-16.aglt2.org
[2026-01-10 09:54:52] apptainer works
[2026-01-10 09:54:53] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:54:53] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:54:53] Starting ATLAS job with PandaID=6965382818
[2026-01-10 09:54:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:35:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:35:19] 2026-01-10 18:34:27,420 | INFO     | chi2: 6.72293818507118
[2026-01-10 13:35:19] 2026-01-10 18:34:27,420 | INFO     | current chi2=6.72293818507118 (change=0.002261242133889654 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,421 | INFO     | right removable region: 205
[2026-01-10 13:35:19] 2026-01-10 18:34:27,421 | INFO     | sum of square deviations: 2710542217.2475843
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | sum of deviations: 79321520161.35434
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | mean x: 1768063760.907767
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | mean y: 2471124.9660194176
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | intersect: -51738285526.96966
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | chi2: 2.468193652168658
[2026-01-10 13:35:19] 2026-01-10 18:34:27,422 | INFO     | current chi2=2.468193652168658 (change=63.28780999631164 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,423 | INFO     | sum of square deviations: 2517889728.895516
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | sum of deviations: 32510407208.74627
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | mean x: 1768063913.4179103
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | mean y: 2508105.3482587063
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | intersect: -22826322377.835712
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | chi2: 0.577565171868193
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | current chi2=0.577565171868193 (change=76.59968165947109 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,424 | INFO     | sum of square deviations: 2334598635.852048
[2026-01-10 13:35:19] 2026-01-10 18:34:27,425 | INFO     | sum of deviations: 15573782050.346954
[2026-01-10 13:35:19] 2026-01-10 18:34:27,425 | INFO     | mean x: 1768064065.9234693
[2026-01-10 13:35:19] 2026-01-10 18:34:27,425 | INFO     | mean y: 2522221.4897959186
[2026-01-10 13:35:19] 2026-01-10 18:34:27,425 | INFO     | intersect: -11791986689.328999
[2026-01-10 13:35:19] 2026-01-10 18:34:27,426 | INFO     | chi2: 0.35053929307380793
[2026-01-10 13:35:19] 2026-01-10 18:34:27,426 | INFO     | current chi2=0.35053929307380793 (change=39.307404575668386 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,426 | INFO     | sum of square deviations: 2160423992.795817
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | sum of deviations: -1506544451.958118
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | mean x: 1768064218.4293194
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | mean y: 2537159.7068062825
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | intersect: 1235474466.394134
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | chi2: 0.09055105028436838
[2026-01-10 13:35:19] 2026-01-10 18:34:27,427 | INFO     | current chi2=0.09055105028436838 (change=74.16807414360183 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,428 | INFO     | sum of square deviations: 1995121464.3494642
[2026-01-10 13:35:19] 2026-01-10 18:34:27,428 | INFO     | sum of deviations: -7960377120.301075
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | mean x: 1768064370.9408603
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | mean y: 2543074.88172043
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | intersect: 7056980319.506474
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | chi2: 0.03560223714996037
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | current chi2=0.03560223714996037 (change=60.6826899984546 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,429 | INFO     | sum of square deviations: 1838504176.5193367
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | sum of deviations: -7507597383.204419
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | mean x: 1768064523.436464
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | mean y: 2542632.2430939227
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | intersect: 7222497179.541646
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | chi2: 0.035549298547234924
[2026-01-10 13:35:19] 2026-01-10 18:34:27,430 | INFO     | current chi2=0.035549298547234924 (change=0.14869459607963775 %)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,431 | INFO     | left removable region: 60
[2026-01-10 13:35:19] 2026-01-10 18:34:27,431 | INFO     | sum of square deviations: 945205649.3379326
[2026-01-10 13:35:19] 2026-01-10 18:34:27,431 | INFO     | sum of deviations: 834212840.4965525
[2026-01-10 13:35:19] 2026-01-10 18:34:27,431 | INFO     | mean x: 1768065255.4206896
[2026-01-10 13:35:19] 2026-01-10 18:34:27,431 | INFO     | mean y: 2532224.4344827584
[2026-01-10 13:35:19] 2026-01-10 18:34:27,432 | INFO     | intersect: -1557914160.9006839
[2026-01-10 13:35:19] 2026-01-10 18:34:27,432 | INFO     | chi2: 0.024779371709954083
[2026-01-10 13:35:19] 2026-01-10 18:34:27,432 | INFO     | current memory leak: 0.88 B/s (using 145 data points, chi2=0.02)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | could have reported an average CPU frequency of 3288 MHz (11 samples)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | ..............................
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . Timing measurements:
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . get job = 0 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . initial setup = 11 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . payload setup = 54 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . stage-in = 0 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . payload execution = 12889 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . stage-out = 2 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | . log creation = 0 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,433 | INFO     | ..............................
[2026-01-10 13:35:19] 2026-01-10 18:34:27,507 | INFO     | 
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | job summary report
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | --------------------------------------------------
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | PanDA job id: 6965382818
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | task id: 47898826
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | errors: (none)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | pilot state: finished 
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | transexitcode: 0
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | exeerrorcode: 0
[2026-01-10 13:35:19] 2026-01-10 18:34:27,508 | INFO     | exeerrordiag: 
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | exitcode: 0
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | exitmsg: OK
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | cpuconsumptiontime: 45366 s
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | nevents: 400
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | neventsw: 0
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | pid: 790814
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | pgrp: 790814
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | corecount: 8
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | event service: False
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | sizes: {0: 2283739, 1: 2283994, 2: 2283994, 12: 2284022, 24: 2284050, 35: 2284078, 46: 2284234, 49: 2284524, 56: 2284552, 12948: 2314719, 12952: 2323717, 12954: 23
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | --------------------------------------------------
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | 
[2026-01-10 13:35:19] 2026-01-10 18:34:27,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 13:35:19] 2026-01-10 18:34:27,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,560 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,560 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,560 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:35:19] 2026-01-10 18:34:27,562 | INFO     | job 6965382818 has completed (purged errors)
[2026-01-10 13:35:19] 2026-01-10 18:34:27,562 | INFO     | overall cleanup function is called
[2026-01-10 13:35:19] 2026-01-10 18:34:28,570 | INFO     | --- collectZombieJob: --- 10, [790814]
[2026-01-10 13:35:19] 2026-01-10 18:34:28,570 | INFO     | zombie collector waiting for pid 790814
[2026-01-10 13:35:19] 2026-01-10 18:34:28,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:35:19] 2026-01-10 18:34:28,570 | INFO     | collected zombie processes
[2026-01-10 13:35:19] 2026-01-10 18:34:28,570 | INFO     | will attempt to kill all subprocesses of pid=790814
[2026-01-10 13:35:19] 2026-01-10 18:34:28,814 | INFO     | process IDs to be killed: [790814] (in reverse order)
[2026-01-10 13:35:19] 2026-01-10 18:34:28,908 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:35:19] 2026-01-10 18:34:28,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:35:19] 2026-01-10 18:34:28,921 | INFO     | did not find any defunct processes belonging to 790814
[2026-01-10 13:35:19] 2026-01-10 18:34:28,933 | INFO     | did not find any defunct processes belonging to 790814
[2026-01-10 13:35:19] 2026-01-10 18:34:28,933 | INFO     | ready for new job
[2026-01-10 13:35:19] 2026-01-10 18:34:28,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:35:19] 2026-01-10 18:34:28,936 | INFO     | ***************************************
[2026-01-10 13:35:19] 2026-01-10 18:34:28,936 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:35:19] 2026-01-10 18:34:28,936 | INFO     | ***************************************
[2026-01-10 13:35:19] 2026-01-10 18:34:28,936 | INFO     | 
[2026-01-10 13:35:19] 2026-01-10 18:34:28,940 | INFO     | architecture information:
[2026-01-10 13:35:19] 2026-01-10 18:34:28,940 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:35:19] 2026-01-10 18:34:28,962 | INFO     | cat /etc/os-release:
[2026-01-10 13:35:19] NAME="CentOS Linux"
[2026-01-10 13:35:19] VERSION="7 (Core)"
[2026-01-10 13:35:19] ID="centos"
[2026-01-10 13:35:19] ID_LIKE="rhel fedora"
[2026-01-10 13:35:19] VERSION_ID="7"
[2026-01-10 13:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:35:19] ANSI_COLOR="0;31"
[2026-01-10 13:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:35:19] HOME_URL="https://www.centos.org/"
[2026-01-10 13:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:35:19] 
[2026-01-10 13:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:35:19] 
[2026-01-10 13:35:19] 2026-01-10 18:34:28,962 | INFO     | ***************************************
[2026-01-10 13:35:19] 2026-01-10 18:34:29,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 13:35:19] 2026-01-10 18:34:29,485 | INFO     | sufficient remaining disk space (95985598464 B)
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | INFO     | update_server=False
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:35:19] 2026-01-10 18:34:29,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:35:19] 2026-01-10 18:34:29,487 | INFO     | aborting loop
[2026-01-10 13:35:19] 2026-01-10 18:34:29,590 | INFO     | all payload control threads have been joined
[2026-01-10 13:35:19] 2026-01-10 18:34:29,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:35:19] 2026-01-10 18:34:29,749 | INFO     | all data control threads have been joined
[2026-01-10 13:35:19] 2026-01-10 18:34:30,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:35:19] 2026-01-10 18:34:30,299 | INFO     | all job control threads have been joined
[2026-01-10 13:35:19] 2026-01-10 18:34:30,492 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,493 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,493 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,580 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,590 | INFO     | [payload] control thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,596 | INFO     | [job] validate thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:30,754 | INFO     | [data] control thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,019 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,090 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,263 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,311 | INFO     | [job] control thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:31,728 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:32,129 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:33,663 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:40,012 | INFO     | job.realtimelogging is not enabled
[2026-01-10 13:35:19] 2026-01-10 18:34:41,018 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:35:19] 2026-01-10 18:34:59,106 | INFO     | PID=780844 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 13:35:19] 2026-01-10 18:34:59,106 | INFO     | .. there are 10 such processes running
[2026-01-10 13:35:19] 2026-01-10 18:34:59,106 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:35:19] 2026-01-10 18:34:59,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:35:19] 2026-01-10 18:34:59,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:35:19] 2026-01-10 18:35:12,243 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:35:19] 2026-01-10 18:35:13,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964483868480)>', '<ExcThread(monitor, started 139963706365696)>']
[2026-01-10 13:35:19] 2026-01-10 18:35:14,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:35:19] 2026-01-10 18:35:14,184 | INFO     | [monitor] control thread has ended
[2026-01-10 13:35:19] 2026-01-10 18:35:18,898 | INFO     | all workflow threads have been joined
[2026-01-10 13:35:19] 2026-01-10 18:35:18,898 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:35:19] 2026-01-10 18:35:18,898 | INFO     | traces error code: 0
[2026-01-10 13:35:19] 2026-01-10 18:35:18,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:35:19] 2026-01-10 18:35:19,064 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:35:19] 2026-01-10 18:35:19,068 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:35:19] 2026-01-10 18:35:19,070 [wrapper] pilotpid: 780844
[2026-01-10 13:35:19] 2026-01-10 18:35:19,073 [wrapper] Pilot exit status: 0
[2026-01-10 13:35:19] 2026-01-10 18:35:19,087 [wrapper] pandaids: 6965382818
[2026-01-10 13:35:19] 2026-01-10 18:35:19,164 [wrapper] cleanup supervisor_pilot 1207128 780845
[2026-01-10 13:35:19] 2026-01-10 18:35:19,167 [wrapper] Test setup, not cleaning
[2026-01-10 13:35:19] 2026-01-10 18:35:19,170 [wrapper] apfmon messages muted
[2026-01-10 13:35:19] 2026-01-10 18:35:19,173 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:35:19] 2026-01-10 18:35:19,176 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:35:19]  *** Error codes and diagnostics ***
[2026-01-10 13:35:19]     "exeErrorCode": 0,
[2026-01-10 13:35:19]     "exeErrorDiag": "",
[2026-01-10 13:35:19]     "pilotErrorCode": 0,
[2026-01-10 13:35:19]     "pilotErrorDiag": "",
[2026-01-10 13:35:19]  *** Listing of results directory ***
[2026-01-10 13:35:19] total 436460
[2026-01-10 13:35:19] -rwx------. 1 boincer umatlas     36322 Jan 10 08:09 runpilot2-wrapper.sh
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:35:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:54 run_atlas
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:54 job.xml
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas 223500972 Jan 10 09:54 EVNT.47898824._000710.pool.root.1
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:54 start_atlas.sh
[2026-01-10 13:35:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:54 shared
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 09:54 input.tar.gz
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:54 boinc_lockfile
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas      2517 Jan 10 09:54 pandaJob.out
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas        57 Jan 10 09:54 setup.sh.local
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas    989556 Jan 10 09:56 agis_schedconf.cvmfs.json
[2026-01-10 13:35:19] drwx------. 5 boincer umatlas      4096 Jan 10 09:56 pilot3
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas      6903 Jan 10 13:27 init_data.xml
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas 215074809 Jan 10 13:33 HITS.47898826._040394.pool.root.1
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:33 boinc_task_state.xml
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas      1027 Jan 10 13:34 memory_monitor_summary.json
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas    435177 Jan 10 13:34 log.47898826._040394.job.log.tgz.1
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas      7776 Jan 10 13:34 heartbeat.json
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas        95 Jan 10 13:34 pilot_heartbeat.json
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:35 boinc_mmap_file
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:35 wrapper_checkpoint.txt
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas      4895 Jan 10 13:35 pilotlog.txt
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas   1784337 Jan 10 13:35 log.47898826._040394.job.log.1
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas       357 Jan 10 13:35 output.list
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:35 runtime_log
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas   2242560 Jan 10 13:35 result.tar.gz
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas       656 Jan 10 13:35 WtKODmOtny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzhmKDmv0Plmm.diag
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 13:35 runtime_log.err
[2026-01-10 13:35:19] -rw-r--r--. 1 boincer umatlas     21080 Jan 10 13:35 stderr.txt
[2026-01-10 13:35:19] HITS file was successfully produced:
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas 215074809 Jan 10 13:33 shared/HITS.pool.root.1
[2026-01-10 13:35:19]  *** Contents of shared directory: ***
[2026-01-10 13:35:19] total 431092
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas 223500972 Jan 10 09:54 ATLAS.root_0
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:54 start_atlas.sh
[2026-01-10 13:35:19] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 09:54 input.tar.gz
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas 215074809 Jan 10 13:33 HITS.pool.root.1
[2026-01-10 13:35:19] -rw-------. 1 boincer umatlas   2242560 Jan 10 13:35 result.tar.gz
13:35:21 (775517): run_atlas exited; CPU time 45581.850186
13:35:21 (775517): called boinc_finish(0)

</stderr_txt>
]]>

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