Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:05 (808691): wrapper (7.7.26015): starting
08:10:05 (808691): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:10:05] Arguments: --nthreads 10
[2026-01-10 08:10:05] Threads: 10
[2026-01-10 08:10:05] Checking for CVMFS
[2026-01-10 08:10:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:10:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:10:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:10:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:10:06] 2.13.3.0 11360 94757 371980 154980 2 242 20106321 32935937 16458 16776704 0 406239557 99.513 518356243 36051 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:10:06] CVMFS is ok
[2026-01-10 08:10:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:10:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:10:06] Further information can be found at the LHC@home message board.
[2026-01-10 08:10:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:10:06] Checking for apptainer binary...
[2026-01-10 08:10:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:10:06] Running /usr/bin/apptainer --version
[2026-01-10 08:10:06] apptainer version 1.4.5-2.el9
[2026-01-10 08:10:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:10:06] c6-8-25-3.aglt2.org
[2026-01-10 08:10:06] apptainer works
[2026-01-10 08:10:06] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:10:06] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:10:06] Starting ATLAS job with PandaID=6965382804
[2026-01-10 08:10:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:44:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:44:02] 2026-01-10 18:42:58,144 | INFO     | monitor loop #1178: job 0:6965382804 is in state 'finished'
[2026-01-10 13:44:02] 2026-01-10 18:42:58,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,928 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 13:44:02] 2026-01-10 18:42:58,940 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2792.4963437499996
[2026-01-10 13:44:02] 2026-01-10 18:42:58,957 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965382804/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,958 | INFO     | extracted standard info from prmon json
[2026-01-10 13:44:02] 2026-01-10 18:42:58,958 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:44:02] 2026-01-10 18:42:58,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:44:02] 2026-01-10 18:42:58,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:44:02] 2026-01-10 18:42:58,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:44:02] 2026-01-10 18:42:58,965 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:44:02] 2026-01-10 18:42:58,965 | INFO     | sum of square deviations: 10842524876.336426
[2026-01-10 13:44:02] 2026-01-10 18:42:58,968 | INFO     | sum of deviations: 56412794614.56266
[2026-01-10 13:44:02] 2026-01-10 18:42:58,968 | INFO     | mean x: 1768060591.232416
[2026-01-10 13:44:02] 2026-01-10 18:42:58,969 | INFO     | mean y: 2588869.097859327
[2026-01-10 13:44:02] 2026-01-10 18:42:58,969 | INFO     | intersect: -9196489771.429829
[2026-01-10 13:44:02] 2026-01-10 18:42:58,969 | INFO     | chi2: 2.4500758897168025
[2026-01-10 13:44:02] 2026-01-10 18:42:58,970 | INFO     | sum of square deviations: 10352762128.562168
[2026-01-10 13:44:02] 2026-01-10 18:42:58,972 | INFO     | sum of deviations: 77921695436.25154
[2026-01-10 13:44:02] 2026-01-10 18:42:58,972 | INFO     | mean x: 1768060438.7360249
[2026-01-10 13:44:02] 2026-01-10 18:42:58,973 | INFO     | mean y: 2595475.555900621
[2026-01-10 13:44:02] 2026-01-10 18:42:58,973 | INFO     | intersect: -13304990008.319973
[2026-01-10 13:44:02] 2026-01-10 18:42:58,973 | INFO     | chi2: 1.6286186103118507
[2026-01-10 13:44:02] 2026-01-10 18:42:58,973 | INFO     | current chi2=1.6286186103118507 (change=33.52783000937582 %)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,974 | INFO     | sum of square deviations: 9877976405.77918
[2026-01-10 13:44:02] 2026-01-10 18:42:58,976 | INFO     | sum of deviations: 75970059967.77287
[2026-01-10 13:44:02] 2026-01-10 18:42:58,976 | INFO     | mean x: 1768060286.2397475
[2026-01-10 13:44:02] 2026-01-10 18:42:58,976 | INFO     | mean y: 2594849.160883281
[2026-01-10 13:44:02] 2026-01-10 18:42:58,977 | INFO     | intersect: -13595296100.82019
[2026-01-10 13:44:02] 2026-01-10 18:42:58,977 | INFO     | chi2: 1.6289587937941306
[2026-01-10 13:44:02] 2026-01-10 18:42:58,977 | INFO     | current chi2=1.6289587937941306 (change=-0.020887854291108843 %)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,977 | INFO     | right removable region: 316
[2026-01-10 13:44:02] 2026-01-10 18:42:58,978 | INFO     | sum of square deviations: 10352715768.562168
[2026-01-10 13:44:02] 2026-01-10 18:42:58,980 | INFO     | sum of deviations: -2812206274.6397552
[2026-01-10 13:44:02] 2026-01-10 18:42:58,980 | INFO     | mean x: 1768060743.7360249
[2026-01-10 13:44:02] 2026-01-10 18:42:58,980 | INFO     | mean y: 2607209.9689440993
[2026-01-10 13:44:02] 2026-01-10 18:42:58,980 | INFO     | intersect: 482882301.8996517
[2026-01-10 13:44:02] 2026-01-10 18:42:58,981 | INFO     | chi2: 0.9167285751936768
[2026-01-10 13:44:02] 2026-01-10 18:42:58,981 | INFO     | current chi2=0.9167285751936768 (change=62.58366612065886 %)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,981 | INFO     | sum of square deviations: 9877883685.77918
[2026-01-10 13:44:02] 2026-01-10 18:42:58,984 | INFO     | sum of deviations: -17101125580.697159
[2026-01-10 13:44:02] 2026-01-10 18:42:58,984 | INFO     | mean x: 1768060896.2397475
[2026-01-10 13:44:02] 2026-01-10 18:42:58,984 | INFO     | mean y: 2611780.785488959
[2026-01-10 13:44:02] 2026-01-10 18:42:58,984 | INFO     | intersect: 3063574268.57478
[2026-01-10 13:44:02] 2026-01-10 18:42:58,985 | INFO     | chi2: 0.8390455149593186
[2026-01-10 13:44:02] 2026-01-10 18:42:58,985 | INFO     | current chi2=0.8390455149593186 (change=8.473943360819332 %)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,985 | INFO     | left removable region: 20
[2026-01-10 13:44:02] 2026-01-10 18:42:58,985 | INFO     | sum of square deviations: 8041991572.486479
[2026-01-10 13:44:02] 2026-01-10 18:42:58,987 | INFO     | sum of deviations: 1924544767.3243241
[2026-01-10 13:44:02] 2026-01-10 18:42:58,987 | INFO     | mean x: 1768060865.7567568
[2026-01-10 13:44:02] 2026-01-10 18:42:58,988 | INFO     | mean y: 2619405.2128378376
[2026-01-10 13:44:02] 2026-01-10 18:42:58,988 | INFO     | intersect: -420498706.36844635
[2026-01-10 13:44:02] 2026-01-10 18:42:58,988 | INFO     | chi2: 0.002425731364291574
[2026-01-10 13:44:02] 2026-01-10 18:42:58,988 | INFO     | current memory leak: 0.24 B/s (using 296 data points, chi2=0.00)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | could have reported an average CPU frequency of 2736 MHz (14 samples)
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | ..............................
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | . Timing measurements:
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | . get job = 0 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | . initial setup = 3 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,989 | INFO     | . payload setup = 6 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,990 | INFO     | . stage-in = 0 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,991 | INFO     | . payload execution = 19921 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,991 | INFO     | . stage-out = 2 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,991 | INFO     | . log creation = 0 s
[2026-01-10 13:44:02] 2026-01-10 18:42:58,991 | INFO     | ..............................
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | 
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | job summary report
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | --------------------------------------------------
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | PanDA job id: 6965382804
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | task id: 47898826
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | errors: (none)
[2026-01-10 13:44:02] 2026-01-10 18:42:59,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | pilot state: finished 
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | transexitcode: 0
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | exeerrorcode: 0
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | exeerrordiag: 
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | exitcode: 0
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | exitmsg: OK
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | cpuconsumptiontime: 60628 s
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | nevents: 400
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | neventsw: 0
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | pid: 831600
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | pgrp: 831600
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | corecount: 10
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | event service: False
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | sizes: {0: 2283747, 1: 2283946, 5: 2284208, 12: 2284264, 19931: 2317317, 19932: 2317316, 19935: 2326498, 19936: 2326554, 19942: 2326748}
[2026-01-10 13:44:02] 2026-01-10 18:42:59,514 | INFO     | --------------------------------------------------
[2026-01-10 13:44:02] 2026-01-10 18:42:59,516 | INFO     | 
[2026-01-10 13:44:02] 2026-01-10 18:42:59,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 13:44:02] 2026-01-10 18:42:59,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:44:02] 2026-01-10 18:42:59,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:44:02] 2026-01-10 18:42:59,538 | INFO     | job 6965382804 has completed (purged errors)
[2026-01-10 13:44:02] 2026-01-10 18:42:59,538 | INFO     | overall cleanup function is called
[2026-01-10 13:44:02] 2026-01-10 18:43:00,546 | INFO     | --- collectZombieJob: --- 10, [831600]
[2026-01-10 13:44:02] 2026-01-10 18:43:00,546 | INFO     | zombie collector waiting for pid 831600
[2026-01-10 13:44:02] 2026-01-10 18:43:00,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:44:02] 2026-01-10 18:43:00,546 | INFO     | collected zombie processes
[2026-01-10 13:44:02] 2026-01-10 18:43:00,546 | INFO     | will attempt to kill all subprocesses of pid=831600
[2026-01-10 13:44:02] 2026-01-10 18:43:00,948 | INFO     | process IDs to be killed: [831600] (in reverse order)
[2026-01-10 13:44:02] 2026-01-10 18:43:01,061 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:44:02] 2026-01-10 18:43:01,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:44:02] 2026-01-10 18:43:01,078 | INFO     | did not find any defunct processes belonging to 831600
[2026-01-10 13:44:02] 2026-01-10 18:43:01,094 | INFO     | did not find any defunct processes belonging to 831600
[2026-01-10 13:44:02] 2026-01-10 18:43:01,094 | INFO     | ready for new job
[2026-01-10 13:44:02] 2026-01-10 18:43:01,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:44:02] 2026-01-10 18:43:01,097 | INFO     | ***************************************
[2026-01-10 13:44:02] 2026-01-10 18:43:01,097 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:44:02] 2026-01-10 18:43:01,097 | INFO     | ***************************************
[2026-01-10 13:44:02] 2026-01-10 18:43:01,097 | INFO     | 
[2026-01-10 13:44:02] 2026-01-10 18:43:01,102 | INFO     | architecture information:
[2026-01-10 13:44:02] 2026-01-10 18:43:01,103 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:44:02] 2026-01-10 18:43:01,117 | INFO     | cat /etc/os-release:
[2026-01-10 13:44:02] NAME="CentOS Linux"
[2026-01-10 13:44:02] VERSION="7 (Core)"
[2026-01-10 13:44:02] ID="centos"
[2026-01-10 13:44:02] ID_LIKE="rhel fedora"
[2026-01-10 13:44:02] VERSION_ID="7"
[2026-01-10 13:44:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:44:02] ANSI_COLOR="0;31"
[2026-01-10 13:44:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:44:02] HOME_URL="https://www.centos.org/"
[2026-01-10 13:44:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:44:02] 
[2026-01-10 13:44:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:44:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:44:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:44:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:44:02] 
[2026-01-10 13:44:02] 2026-01-10 18:43:01,117 | INFO     | ***************************************
[2026-01-10 13:44:02] 2026-01-10 18:43:01,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 13:44:02] 2026-01-10 18:43:01,636 | INFO     | sufficient remaining disk space (75838259200 B)
[2026-01-10 13:44:02] 2026-01-10 18:43:01,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:44:02] 2026-01-10 18:43:01,637 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:44:02] 2026-01-10 18:43:01,637 | INFO     | update_server=False
[2026-01-10 13:44:02] 2026-01-10 18:43:01,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:44:02] 2026-01-10 18:43:01,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:44:02] 2026-01-10 18:43:01,653 | INFO     | aborting loop
[2026-01-10 13:44:02] 2026-01-10 18:43:01,874 | INFO     | all data control threads have been joined
[2026-01-10 13:44:02] 2026-01-10 18:43:02,232 | INFO     | all payload control threads have been joined
[2026-01-10 13:44:02] 2026-01-10 18:43:02,642 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,658 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,679 | INFO     | [job] validate thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,745 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,799 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,835 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,879 | INFO     | [data] control thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:02,889 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:03,063 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:03,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:44:02] 2026-01-10 18:43:03,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:44:02] 2026-01-10 18:43:03,239 | INFO     | [payload] control thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:03,245 | INFO     | all job control threads have been joined
[2026-01-10 13:44:02] 2026-01-10 18:43:03,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:04,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:44:02] 2026-01-10 18:43:04,117 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:04,250 | INFO     | [job] control thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:05,085 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:05,095 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:07,227 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:44:02] 2026-01-10 18:43:31,526 | INFO     | PID=813299 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 13:44:02] 2026-01-10 18:43:31,527 | INFO     | .. there are 19 such processes running
[2026-01-10 13:44:02] 2026-01-10 18:43:31,527 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:44:02] 2026-01-10 18:43:31,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:44:02] 2026-01-10 18:43:31,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:44:02] 2026-01-10 18:43:56,331 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:44:02] 2026-01-10 18:43:56,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896787121984)>', '<ExcThread(monitor, started 139896060630784)>']
[2026-01-10 13:44:02] 2026-01-10 18:43:57,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:44:02] 2026-01-10 18:43:57,662 | INFO     | [monitor] control thread has ended
[2026-01-10 13:44:02] 2026-01-10 18:44:01,808 | INFO     | all workflow threads have been joined
[2026-01-10 13:44:02] 2026-01-10 18:44:01,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:44:02] 2026-01-10 18:44:01,808 | INFO     | traces error code: 0
[2026-01-10 13:44:02] 2026-01-10 18:44:01,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:44:02] 2026-01-10 18:44:01,951 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:44:02] 2026-01-10 18:44:01,954 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:44:02] 2026-01-10 18:44:01,955 [wrapper] pilotpid: 813299
[2026-01-10 13:44:02] 2026-01-10 18:44:01,957 [wrapper] Pilot exit status: 0
[2026-01-10 13:44:02] 2026-01-10 18:44:01,967 [wrapper] pandaids: 6965382804
[2026-01-10 13:44:02] 2026-01-10 18:44:02,026 [wrapper] cleanup supervisor_pilot 2057385 813300
[2026-01-10 13:44:02] 2026-01-10 18:44:02,029 [wrapper] Test setup, not cleaning
[2026-01-10 13:44:02] 2026-01-10 18:44:02,030 [wrapper] apfmon messages muted
[2026-01-10 13:44:02] 2026-01-10 18:44:02,033 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:44:02] 2026-01-10 18:44:02,034 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:44:02]  *** Error codes and diagnostics ***
[2026-01-10 13:44:02]     "exeErrorCode": 0,
[2026-01-10 13:44:02]     "exeErrorDiag": "",
[2026-01-10 13:44:02]     "pilotErrorCode": 0,
[2026-01-10 13:44:02]     "pilotErrorDiag": "",
[2026-01-10 13:44:02]  *** Listing of results directory ***
[2026-01-10 13:44:02] total 447648
[2026-01-10 13:44:02] -rwx------. 1 boincer umatlas     36322 Jan 10 08:09 runpilot2-wrapper.sh
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:44:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:10 run_atlas
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:10 job.xml
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas 225222444 Jan 10 08:10 EVNT.47898824._000905.pool.root.1
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 13:44:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:10 shared
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 08:10 input.tar.gz
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:10 boinc_lockfile
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 08:10 pandaJob.out
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas        57 Jan 10 08:10 setup.sh.local
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas    989556 Jan 10 08:10 agis_schedconf.cvmfs.json
[2026-01-10 13:44:02] drwx------. 5 boincer umatlas      4096 Jan 10 08:10 pilot3
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas      6875 Jan 10 13:39 init_data.xml
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas 223179817 Jan 10 13:42 HITS.47898826._040380.pool.root.1
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:42 boinc_task_state.xml
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas      1056 Jan 10 13:42 memory_monitor_summary.json
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas    569467 Jan 10 13:42 log.47898826._040380.job.log.tgz.1
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas      7823 Jan 10 13:42 heartbeat.json
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas        95 Jan 10 13:43 pilot_heartbeat.json
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:43 boinc_mmap_file
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:43 wrapper_checkpoint.txt
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas      4823 Jan 10 13:44 pilotlog.txt
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas   2465962 Jan 10 13:44 log.47898826._040380.job.log.1
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas       357 Jan 10 13:44 output.list
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:44 runtime_log
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas   3051520 Jan 10 13:44 result.tar.gz
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas      9350 Jan 10 13:44 runtime_log.err
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas       657 Jan 10 13:44 1FBODmOtny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmshmKDmWz2rxn.diag
[2026-01-10 13:44:02] -rw-r--r--. 1 boincer umatlas     21216 Jan 10 13:44 stderr.txt
[2026-01-10 13:44:02] HITS file was successfully produced:
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas 223179817 Jan 10 13:42 shared/HITS.pool.root.1
[2026-01-10 13:44:02]  *** Contents of shared directory: ***
[2026-01-10 13:44:02] total 441480
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas 225222444 Jan 10 08:10 ATLAS.root_0
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 13:44:02] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 08:10 input.tar.gz
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas 223179817 Jan 10 13:42 HITS.pool.root.1
[2026-01-10 13:44:02] -rw-------. 1 boincer umatlas   3051520 Jan 10 13:44 result.tar.gz
13:44:03 (808691): run_atlas exited; CPU time 61488.813542
13:44:03 (808691): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN