Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:17 (545468): wrapper (7.7.26015): starting
08:10:17 (545468): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:10:17] Arguments: --nthreads 8
[2026-01-10 08:10:17] Threads: 8
[2026-01-10 08:10:17] Checking for CVMFS
[2026-01-10 08:10:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:10:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:10:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:10:18] 2.13.3.0 11442 94891 405384 154980 2 17 19647426 32935936 9843 16776704 17 359262386 99.467 502092177 38946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:10:18] CVMFS is ok
[2026-01-10 08:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:10:18] Further information can be found at the LHC@home message board.
[2026-01-10 08:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:10:18] Checking for apptainer binary...
[2026-01-10 08:10:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:10:18] Running /usr/bin/apptainer --version
[2026-01-10 08:10:18] apptainer version 1.4.5-2.el9
[2026-01-10 08:10:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:10:18] c7-11-16.aglt2.org
[2026-01-10 08:10:18] apptainer works
[2026-01-10 08:10:19] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:10:19] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:10:19] Starting ATLAS job with PandaID=6965382779
[2026-01-10 08:10:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:48:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:48:07] 2026-01-10 16:47:24,153 | INFO     | time since job start (12947s) is within the limit (349056.0s)
[2026-01-10 11:48:07] 2026-01-10 16:47:26,158 | INFO     | time since job start (12949s) is within the limit (349056.0s)
[2026-01-10 11:48:07] 2026-01-10 16:47:26,601 | INFO     | monitor loop #855: job 0:6965382779 is in state 'finished'
[2026-01-10 11:48:07] 2026-01-10 16:47:26,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:48:07] 2026-01-10 16:47:28,164 | INFO     | time since job start (12951s) is within the limit (349056.0s)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,106 | INFO     | monitor loop #856: job 0:6965382779 is in state 'finished'
[2026-01-10 11:48:07] 2026-01-10 16:47:29,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,605 | INFO     | PID=555171 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 11:48:07] 2026-01-10 16:47:29,605 | INFO     | .. there are 11 such processes running
[2026-01-10 11:48:07] 2026-01-10 16:47:29,935 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:48:07] 2026-01-10 16:47:29,939 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.7014843749994
[2026-01-10 11:48:07] 2026-01-10 16:47:29,948 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965382779/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,949 | INFO     | extracted standard info from prmon json
[2026-01-10 11:48:07] 2026-01-10 16:47:29,949 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:48:07] 2026-01-10 16:47:29,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:48:07] 2026-01-10 16:47:29,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:48:07] 2026-01-10 16:47:29,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:48:07] 2026-01-10 16:47:29,953 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:48:07] 2026-01-10 16:47:29,953 | INFO     | sum of square deviations: 2871718800.9952316
[2026-01-10 11:48:07] 2026-01-10 16:47:29,954 | INFO     | sum of deviations: 25530268209.704754
[2026-01-10 11:48:07] 2026-01-10 16:47:29,954 | INFO     | mean x: 1768057237.195238
[2026-01-10 11:48:07] 2026-01-10 16:47:29,954 | INFO     | mean y: 2510269.1047619046
[2026-01-10 11:48:07] 2026-01-10 16:47:29,955 | INFO     | intersect: -15715942199.173298
[2026-01-10 11:48:07] 2026-01-10 16:47:29,955 | INFO     | chi2: 3.7445971197544807
[2026-01-10 11:48:07] 2026-01-10 16:47:29,955 | INFO     | sum of square deviations: 2671476996.439033
[2026-01-10 11:48:07] 2026-01-10 16:47:29,956 | INFO     | sum of deviations: 38329302882.12195
[2026-01-10 11:48:07] 2026-01-10 16:47:29,956 | INFO     | mean x: 1768057084.707317
[2026-01-10 11:48:07] 2026-01-10 16:47:29,956 | INFO     | mean y: 2519821.5853658537
[2026-01-10 11:48:07] 2026-01-10 16:47:29,956 | INFO     | intersect: -25364868931.13859
[2026-01-10 11:48:07] 2026-01-10 16:47:29,957 | INFO     | chi2: 3.0834888026106917
[2026-01-10 11:48:07] 2026-01-10 16:47:29,957 | INFO     | current chi2=3.0834888026106917 (change=17.654991872320178 %)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,957 | INFO     | right removable region: 204
[2026-01-10 11:48:07] 2026-01-10 16:47:29,957 | INFO     | sum of square deviations: 2671400746.019515
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | sum of deviations: -30013545988.10244
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | mean x: 1768057389.7121952
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | mean y: 2552368.7609756095
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | intersect: 19866914484.703754
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | chi2: 0.8833620891119774
[2026-01-10 11:48:07] 2026-01-10 16:47:29,958 | INFO     | current chi2=0.8833620891119774 (change=76.40968945759654 %)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,959 | INFO     | sum of square deviations: 2480630014.874984
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | sum of deviations: -39056788862.125015
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | mean x: 1768057542.225
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | mean y: 2559559.425
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | intersect: 27840104742.981785
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | chi2: 0.7779915753296724
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | current chi2=0.7779915753296724 (change=11.928349097280304 %)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | left removable region: 20
[2026-01-10 11:48:07] 2026-01-10 16:47:29,960 | INFO     | sum of square deviations: 1931610427.4782648
[2026-01-10 11:48:07] 2026-01-10 16:47:29,961 | INFO     | sum of deviations: -21162890339.956528
[2026-01-10 11:48:07] 2026-01-10 16:47:29,961 | INFO     | mean x: 1768057664.2608695
[2026-01-10 11:48:07] 2026-01-10 16:47:29,961 | INFO     | mean y: 2567303.7282608696
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | intersect: 19373559472.330795
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | chi2: 0.07886176274808707
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | current memory leak: -10.96 B/s (using 184 data points, chi2=0.08)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | could have reported an average CPU frequency of 3289 MHz (11 samples)
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | ..............................
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | . Timing measurements:
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | . get job = 0 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,962 | INFO     | . initial setup = 7 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | . payload setup = 50 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | . stage-in = 0 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | . payload execution = 12793 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | . stage-out = 4 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | . log creation = 1 s
[2026-01-10 11:48:07] 2026-01-10 16:47:29,963 | INFO     | ..............................
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | 
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | job summary report
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | --------------------------------------------------
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | PanDA job id: 6965382779
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | task id: 47898826
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | errors: (none)
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | pilot state: finished 
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | transexitcode: 0
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | exeerrorcode: 0
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | exeerrordiag: 
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | exitcode: 0
[2026-01-10 11:48:07] 2026-01-10 16:47:30,114 | INFO     | exitmsg: OK
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | cpuconsumptiontime: 46985 s
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | nevents: 400
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | neventsw: 0
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | pid: 572819
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | pgrp: 572819
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | corecount: 8
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | event service: False
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283976, 13: 2283976, 24: 2284032, 35: 2284060, 40: 2284478, 46: 2284506, 12847: 2314591, 12852: 2323589, 12853: 2323645, 12868:
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | --------------------------------------------------
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | 
[2026-01-10 11:48:07] 2026-01-10 16:47:30,115 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 11:48:07] 2026-01-10 16:47:30,192 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,192 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,192 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,192 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,193 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:48:07] 2026-01-10 16:47:30,194 | INFO     | job 6965382779 has completed (purged errors)
[2026-01-10 11:48:07] 2026-01-10 16:47:30,194 | INFO     | overall cleanup function is called
[2026-01-10 11:48:07] 2026-01-10 16:47:31,225 | INFO     | --- collectZombieJob: --- 10, [572819]
[2026-01-10 11:48:07] 2026-01-10 16:47:31,230 | INFO     | zombie collector waiting for pid 572819
[2026-01-10 11:48:07] 2026-01-10 16:47:31,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:48:07] 2026-01-10 16:47:31,231 | INFO     | collected zombie processes
[2026-01-10 11:48:07] 2026-01-10 16:47:31,231 | INFO     | will attempt to kill all subprocesses of pid=572819
[2026-01-10 11:48:07] 2026-01-10 16:47:32,814 | INFO     | process IDs to be killed: [572819] (in reverse order)
[2026-01-10 11:48:07] 2026-01-10 16:47:33,844 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:48:07] 2026-01-10 16:47:33,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:48:07] 2026-01-10 16:47:33,905 | INFO     | did not find any defunct processes belonging to 572819
[2026-01-10 11:48:07] 2026-01-10 16:47:33,960 | INFO     | did not find any defunct processes belonging to 572819
[2026-01-10 11:48:07] 2026-01-10 16:47:33,960 | INFO     | ready for new job
[2026-01-10 11:48:07] 2026-01-10 16:47:33,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:48:07] 2026-01-10 16:47:34,000 | INFO     | ***************************************
[2026-01-10 11:48:07] 2026-01-10 16:47:34,000 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:48:07] 2026-01-10 16:47:34,000 | INFO     | ***************************************
[2026-01-10 11:48:07] 2026-01-10 16:47:34,000 | INFO     | 
[2026-01-10 11:48:07] 2026-01-10 16:47:34,003 | INFO     | architecture information:
[2026-01-10 11:48:07] 2026-01-10 16:47:34,018 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:48:07] 2026-01-10 16:47:34,115 | INFO     | cat /etc/os-release:
[2026-01-10 11:48:07] NAME="CentOS Linux"
[2026-01-10 11:48:07] VERSION="7 (Core)"
[2026-01-10 11:48:07] ID="centos"
[2026-01-10 11:48:07] ID_LIKE="rhel fedora"
[2026-01-10 11:48:07] VERSION_ID="7"
[2026-01-10 11:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:48:07] ANSI_COLOR="0;31"
[2026-01-10 11:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:48:07] HOME_URL="https://www.centos.org/"
[2026-01-10 11:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:48:07] 
[2026-01-10 11:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:48:07] 
[2026-01-10 11:48:07] 2026-01-10 16:47:34,115 | INFO     | ***************************************
[2026-01-10 11:48:07] 2026-01-10 16:47:34,619 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 11:48:07] 2026-01-10 16:47:34,801 | INFO     | sufficient remaining disk space (95566168064 B)
[2026-01-10 11:48:07] 2026-01-10 16:47:34,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:48:07] 2026-01-10 16:47:34,801 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:48:07] 2026-01-10 16:47:34,801 | INFO     | update_server=False
[2026-01-10 11:48:07] 2026-01-10 16:47:34,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:48:07] 2026-01-10 16:47:34,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:48:07] 2026-01-10 16:47:34,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:48:07] 2026-01-10 16:47:35,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:48:07] 2026-01-10 16:47:35,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:48:07] 2026-01-10 16:47:35,143 | INFO     | aborting loop
[2026-01-10 11:48:07] 2026-01-10 16:47:35,460 | INFO     | all data control threads have been joined
[2026-01-10 11:48:07] 2026-01-10 16:47:35,808 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:35,939 | INFO     | all job control threads have been joined
[2026-01-10 11:48:07] 2026-01-10 16:47:36,016 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,030 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,059 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,149 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,273 | INFO     | all payload control threads have been joined
[2026-01-10 11:48:07] 2026-01-10 16:47:36,465 | INFO     | [data] control thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,611 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,650 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,650 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,824 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:36,947 | INFO     | [job] control thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:37,093 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:37,160 | INFO     | [job] validate thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:37,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:37,279 | INFO     | [payload] control thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:38,830 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:48:07] 2026-01-10 16:47:59,135 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:48:07] 2026-01-10 16:47:59,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222876825408)>', '<ExcThread(monitor, started 140222528468736)>']
[2026-01-10 11:48:07] 2026-01-10 16:48:02,027 | INFO     | PID=555171 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 11:48:07] 2026-01-10 16:48:02,027 | INFO     | .. there are 11 such processes running
[2026-01-10 11:48:07] 2026-01-10 16:48:02,028 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:48:07] 2026-01-10 16:48:02,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:48:07] 2026-01-10 16:48:02,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:48:07] 2026-01-10 16:48:02,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:48:07] 2026-01-10 16:48:02,028 | INFO     | [monitor] control thread has ended
[2026-01-10 11:48:07] 2026-01-10 16:48:04,816 | INFO     | all workflow threads have been joined
[2026-01-10 11:48:07] 2026-01-10 16:48:04,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:48:07] 2026-01-10 16:48:04,816 | INFO     | traces error code: 0
[2026-01-10 11:48:07] 2026-01-10 16:48:04,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:48:07] 2026-01-10 16:48:05,708 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:48:07] 2026-01-10 16:48:05,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:48:07] 2026-01-10 16:48:05,784 [wrapper] pilotpid: 555171
[2026-01-10 11:48:07] 2026-01-10 16:48:05,830 [wrapper] Pilot exit status: 0
[2026-01-10 11:48:07] 2026-01-10 16:48:05,964 [wrapper] pandaids: 6965382779
[2026-01-10 11:48:07] 2026-01-10 16:48:06,628 [wrapper] cleanup supervisor_pilot  982948 555172
[2026-01-10 11:48:07] 2026-01-10 16:48:06,635 [wrapper] Test setup, not cleaning
[2026-01-10 11:48:07] 2026-01-10 16:48:06,646 [wrapper] apfmon messages muted
[2026-01-10 11:48:07] 2026-01-10 16:48:06,691 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:48:07] 2026-01-10 16:48:06,697 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:48:07]  *** Error codes and diagnostics ***
[2026-01-10 11:48:07]     "exeErrorCode": 0,
[2026-01-10 11:48:07]     "exeErrorDiag": "",
[2026-01-10 11:48:07]     "pilotErrorCode": 0,
[2026-01-10 11:48:07]     "pilotErrorDiag": "",
[2026-01-10 11:48:07]  *** Listing of results directory ***
[2026-01-10 11:48:07] total 446528
[2026-01-10 11:48:07] -rwx------. 1 boincer umatlas     36322 Jan 10 08:09 runpilot2-wrapper.sh
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:48:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:10 run_atlas
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:10 job.xml
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas 224159761 Jan 10 08:10 EVNT.47898824._001158.pool.root.1
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 11:48:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:10 shared
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 08:10 input.tar.gz
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:10 boinc_lockfile
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:10 pandaJob.out
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas        57 Jan 10 08:10 setup.sh.local
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas    989556 Jan 10 08:11 agis_schedconf.cvmfs.json
[2026-01-10 11:48:07] drwx------. 5 boincer umatlas      4096 Jan 10 08:11 pilot3
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas      6904 Jan 10 11:39 init_data.xml
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas 224866791 Jan 10 11:46 HITS.47898826._040355.pool.root.1
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas       531 Jan 10 11:46 boinc_task_state.xml
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas      1027 Jan 10 11:47 memory_monitor_summary.json
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas   1516240 Jan 10 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas    448142 Jan 10 11:47 log.47898826._040355.job.log.tgz.1
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas      7778 Jan 10 11:47 heartbeat.json
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 11:47 boinc_mmap_file
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas        28 Jan 10 11:47 wrapper_checkpoint.txt
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas        95 Jan 10 11:48 pilot_heartbeat.json
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas      4823 Jan 10 11:48 pilotlog.txt
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas   1703533 Jan 10 11:48 log.47898826._040355.job.log.1
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas       357 Jan 10 11:48 output.list
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas       620 Jan 10 11:48 runtime_log
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas   2170880 Jan 10 11:48 result.tar.gz
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas       655 Jan 10 11:48 tbtNDmOtny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmghmKDmnw7DPo.diag
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 11:48 runtime_log.err
[2026-01-10 11:48:07] -rw-r--r--. 1 boincer umatlas     21507 Jan 10 11:48 stderr.txt
[2026-01-10 11:48:07] HITS file was successfully produced:
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas 224866791 Jan 10 11:46 shared/HITS.pool.root.1
[2026-01-10 11:48:07]  *** Contents of shared directory: ***
[2026-01-10 11:48:07] total 441228
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas 224159761 Jan 10 08:10 ATLAS.root_0
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 11:48:07] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 08:10 input.tar.gz
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas 224866791 Jan 10 11:46 HITS.pool.root.1
[2026-01-10 11:48:07] -rw-------. 1 boincer umatlas   2170880 Jan 10 11:48 result.tar.gz
11:48:29 (545468): run_atlas exited; CPU time 47208.228127
11:48:29 (545468): called boinc_finish(0)

</stderr_txt>
]]>

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