Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:00 (3849471): wrapper (7.7.26015): starting
08:10:00 (3849471): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 08:10:00] Arguments: --nthreads 12
[2026-01-10 08:10:00] Threads: 12
[2026-01-10 08:10:00] Checking for CVMFS
[2026-01-10 08:10:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:10:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:10:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:10:01] 2.13.3.0 6324 22645 154532 154980 2 83 22229758 40960000 5107 16776704 0 13267859 99.820 16311578 37044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:10:01] CVMFS is ok
[2026-01-10 08:10:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:10:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:10:01] Further information can be found at the LHC@home message board.
[2026-01-10 08:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:10:01] Checking for apptainer binary...
[2026-01-10 08:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:10:01] Running /usr/bin/apptainer --version
[2026-01-10 08:10:01] apptainer version 1.4.5-2.el9
[2026-01-10 08:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:10:01] c-211-8.aglt2.org
[2026-01-10 08:10:01] apptainer works
[2026-01-10 08:10:01] Set ATHENA_PROC_NUMBER=12
[2026-01-10 08:10:01] Set ATHENA_CORE_NUMBER=12
[2026-01-10 08:10:01] Starting ATLAS job with PandaID=6965382745
[2026-01-10 08:10:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:53:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:53:49] 2026-01-11 02:52:46,267 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965382745/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,268 | INFO     | extracted standard info from prmon json
[2026-01-10 21:53:49] 2026-01-11 02:52:46,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:53:49] 2026-01-11 02:52:46,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:53:49] 2026-01-11 02:52:46,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 21:53:49] 2026-01-11 02:52:46,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 21:53:49] 2026-01-11 02:52:46,296 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:53:49] 2026-01-11 02:52:46,301 | INFO     | sum of square deviations: 163569201890.1539
[2026-01-10 21:53:49] 2026-01-11 02:52:46,333 | INFO     | sum of deviations: 137187228795.44528
[2026-01-10 21:53:49] 2026-01-11 02:52:46,333 | INFO     | mean x: 1768075251.6856437
[2026-01-10 21:53:49] 2026-01-11 02:52:46,333 | INFO     | mean y: 2703073.297029703
[2026-01-10 21:53:49] 2026-01-11 02:52:46,333 | INFO     | intersect: -1480200439.5748742
[2026-01-10 21:53:49] 2026-01-11 02:52:46,334 | INFO     | chi2: 2.700394748114125
[2026-01-10 21:53:49] 2026-01-11 02:52:46,340 | INFO     | sum of square deviations: 160551614233.08063
[2026-01-10 21:53:49] 2026-01-11 02:52:46,371 | INFO     | sum of deviations: 248371086535.79807
[2026-01-10 21:53:49] 2026-01-11 02:52:46,371 | INFO     | mean x: 1768075099.193026
[2026-01-10 21:53:49] 2026-01-11 02:52:46,371 | INFO     | mean y: 2708670.7496886677
[2026-01-10 21:53:49] 2026-01-11 02:52:46,371 | INFO     | intersect: -2732478611.926533
[2026-01-10 21:53:49] 2026-01-11 02:52:46,372 | INFO     | chi2: 1.271315233298598
[2026-01-10 21:53:49] 2026-01-11 02:52:46,373 | INFO     | current chi2=1.271315233298598 (change=52.92113369030782 %)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,374 | INFO     | sum of square deviations: 157571376113.4198
[2026-01-10 21:53:49] 2026-01-11 02:52:46,405 | INFO     | sum of deviations: 246544198333.69217
[2026-01-10 21:53:49] 2026-01-11 02:52:46,405 | INFO     | mean x: 1768074946.7005012
[2026-01-10 21:53:49] 2026-01-11 02:52:46,405 | INFO     | mean y: 2708577.2706766916
[2026-01-10 21:53:49] 2026-01-11 02:52:46,409 | INFO     | intersect: -2763711511.707881
[2026-01-10 21:53:49] 2026-01-11 02:52:46,411 | INFO     | chi2: 1.2712075786341999
[2026-01-10 21:53:49] 2026-01-11 02:52:46,411 | INFO     | current chi2=1.2712075786341999 (change=0.00846797565060085 %)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,411 | INFO     | right removable region: 797
[2026-01-10 21:53:49] 2026-01-11 02:52:46,412 | INFO     | sum of square deviations: 160551029853.08057
[2026-01-10 21:53:49] 2026-01-11 02:52:46,443 | INFO     | sum of deviations: 18439416055.01613
[2026-01-10 21:53:49] 2026-01-11 02:52:46,443 | INFO     | mean x: 1768075404.193026
[2026-01-10 21:53:49] 2026-01-11 02:52:46,444 | INFO     | mean y: 2709055.0386052304
[2026-01-10 21:53:49] 2026-01-11 02:52:46,444 | INFO     | intersect: -200355839.80753928
[2026-01-10 21:53:49] 2026-01-11 02:52:46,445 | INFO     | chi2: 1.470631164212968
[2026-01-10 21:53:49] 2026-01-11 02:52:46,445 | INFO     | current chi2=1.470631164212968 (change=45.54014129823009 %)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,450 | INFO     | sum of square deviations: 157570207353.41983
[2026-01-10 21:53:49] 2026-01-11 02:52:46,531 | INFO     | sum of deviations: 12136112706.771729
[2026-01-10 21:53:49] 2026-01-11 02:52:46,532 | INFO     | mean x: 1768075556.7005012
[2026-01-10 21:53:49] 2026-01-11 02:52:46,532 | INFO     | mean y: 2709376.0701754387
[2026-01-10 21:53:49] 2026-01-11 02:52:46,532 | INFO     | intersect: -133468424.22983631
[2026-01-10 21:53:49] 2026-01-11 02:52:46,533 | INFO     | chi2: 1.464880718922004
[2026-01-10 21:53:49] 2026-01-11 02:52:46,533 | INFO     | current chi2=1.464880718922004 (change=0.39101886529388524 %)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,534 | INFO     | left removable region: 20
[2026-01-10 21:53:49] 2026-01-11 02:52:46,535 | INFO     | sum of square deviations: 145454646968.83707
[2026-01-10 21:53:49] 2026-01-11 02:52:46,583 | INFO     | sum of deviations: 123594209775.57153
[2026-01-10 21:53:49] 2026-01-11 02:52:46,583 | INFO     | mean x: 1768075526.2329473
[2026-01-10 21:53:49] 2026-01-11 02:52:46,583 | INFO     | mean y: 2714900.5714285714
[2026-01-10 21:53:49] 2026-01-11 02:52:46,584 | INFO     | intersect: -1499635846.153814
[2026-01-10 21:53:49] 2026-01-11 02:52:46,585 | INFO     | chi2: 0.026344856170703704
[2026-01-10 21:53:49] 2026-01-11 02:52:46,585 | INFO     | current memory leak: 0.85 B/s (using 777 data points, chi2=0.03)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,586 | INFO     | could have reported an average CPU frequency of 2669 MHz (30 samples)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,586 | INFO     | ..............................
[2026-01-10 21:53:49] 2026-01-11 02:52:46,586 | INFO     | . Timing measurements:
[2026-01-10 21:53:49] 2026-01-11 02:52:46,586 | INFO     | . get job = 0 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,590 | INFO     | . initial setup = 2 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | . payload setup = 5 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | . stage-in = 0 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | . payload execution = 49276 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | . stage-out = 8 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | . log creation = 2 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,591 | INFO     | ..............................
[2026-01-10 21:53:49] 2026-01-11 02:52:46,921 | INFO     | 
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | job summary report
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | --------------------------------------------------
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | PanDA job id: 6965382745
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | task id: 47898826
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | errors: (none)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | pilot state: finished 
[2026-01-10 21:53:49] 2026-01-11 02:52:46,922 | INFO     | transexitcode: 0
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | exeerrorcode: 0
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | exeerrordiag: 
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | exitcode: 0
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | exitmsg: OK
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | cpuconsumptiontime: 77126 s
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | nevents: 400
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | neventsw: 0
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | pid: 3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | pgrp: 3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:46,923 | INFO     | corecount: 12
[2026-01-10 21:53:49] 2026-01-11 02:52:46,924 | INFO     | event service: False
[2026-01-10 21:53:49] 2026-01-11 02:52:46,924 | INFO     | sizes: {0: 2283747, 1: 2283946, 5: 2284208, 12: 2284264, 49287: 2331144, 49288: 2331143, 49296: 2340325, 49301: 2340381, 49339: 2340575}
[2026-01-10 21:53:49] 2026-01-11 02:52:46,924 | INFO     | --------------------------------------------------
[2026-01-10 21:53:49] 2026-01-11 02:52:46,924 | INFO     | 
[2026-01-10 21:53:49] 2026-01-11 02:52:46,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:53:49] 2026-01-11 02:52:46,972 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,972 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,972 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,972 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:53:49] 2026-01-11 02:52:46,974 | INFO     | job 6965382745 has completed (purged errors)
[2026-01-10 21:53:49] 2026-01-11 02:52:46,975 | INFO     | overall cleanup function is called
[2026-01-10 21:53:49] 2026-01-11 02:52:47,495 | INFO     | PID=3854691 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:53:49] 2026-01-11 02:52:47,511 | INFO     | .. there are 8 such processes running
[2026-01-10 21:53:49] 2026-01-11 02:52:47,995 | INFO     | --- collectZombieJob: --- 10, [3861371]
[2026-01-10 21:53:49] 2026-01-11 02:52:47,996 | INFO     | zombie collector waiting for pid 3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:47,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:53:49] 2026-01-11 02:52:47,996 | INFO     | collected zombie processes
[2026-01-10 21:53:49] 2026-01-11 02:52:47,996 | INFO     | will attempt to kill all subprocesses of pid=3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:48,423 | INFO     | process IDs to be killed: [3861371] (in reverse order)
[2026-01-10 21:53:49] 2026-01-11 02:52:48,890 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:53:49] 2026-01-11 02:52:48,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:53:49] 2026-01-11 02:52:48,906 | INFO     | did not find any defunct processes belonging to 3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:48,922 | INFO     | did not find any defunct processes belonging to 3861371
[2026-01-10 21:53:49] 2026-01-11 02:52:48,922 | INFO     | ready for new job
[2026-01-10 21:53:49] 2026-01-11 02:52:48,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:53:49] 2026-01-11 02:52:48,929 | INFO     | ***************************************
[2026-01-10 21:53:49] 2026-01-11 02:52:48,930 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:53:49] 2026-01-11 02:52:48,930 | INFO     | ***************************************
[2026-01-10 21:53:49] 2026-01-11 02:52:48,930 | INFO     | 
[2026-01-10 21:53:49] 2026-01-11 02:52:48,933 | INFO     | architecture information:
[2026-01-10 21:53:49] 2026-01-11 02:52:48,956 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:53:49] 2026-01-11 02:52:49,021 | INFO     | cat /etc/os-release:
[2026-01-10 21:53:49] NAME="CentOS Linux"
[2026-01-10 21:53:49] VERSION="7 (Core)"
[2026-01-10 21:53:49] ID="centos"
[2026-01-10 21:53:49] ID_LIKE="rhel fedora"
[2026-01-10 21:53:49] VERSION_ID="7"
[2026-01-10 21:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:53:49] ANSI_COLOR="0;31"
[2026-01-10 21:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:53:49] HOME_URL="https://www.centos.org/"
[2026-01-10 21:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:53:49] 
[2026-01-10 21:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:53:49] 
[2026-01-10 21:53:49] 2026-01-11 02:52:49,021 | INFO     | ***************************************
[2026-01-10 21:53:49] 2026-01-11 02:52:49,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:53:49] 2026-01-11 02:52:49,584 | INFO     | sufficient remaining disk space (63948455936 B)
[2026-01-10 21:53:49] 2026-01-11 02:52:49,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:53:49] 2026-01-11 02:52:49,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:53:49] 2026-01-11 02:52:49,584 | INFO     | update_server=False
[2026-01-10 21:53:49] 2026-01-11 02:52:49,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:53:49] 2026-01-11 02:52:49,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:53:49] 2026-01-11 02:52:49,908 | INFO     | all data control threads have been joined
[2026-01-10 21:53:49] 2026-01-11 02:52:50,022 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 21:53:49] 2026-01-11 02:52:50,023 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 21:53:49] 2026-01-11 02:52:50,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:53:49] 2026-01-11 02:52:50,023 | INFO     | will abort loop
[2026-01-10 21:53:49] 2026-01-11 02:52:50,260 | INFO     | all payload control threads have been joined
[2026-01-10 21:53:49] 2026-01-11 02:52:50,591 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:50,649 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:50,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:53:49] 2026-01-11 02:52:50,916 | INFO     | [data] control thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:50,947 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,029 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,084 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,123 | INFO     | [job] validate thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,255 | INFO     | all job control threads have been joined
[2026-01-10 21:53:49] 2026-01-11 02:52:51,267 | INFO     | [payload] control thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,447 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,598 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,716 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,913 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:51,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:53:49] 2026-01-11 02:52:52,261 | INFO     | [job] control thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:52,948 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:52:54,885 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:53:49] 2026-01-11 02:53:23,829 | INFO     | PID=3854691 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:53:49] 2026-01-11 02:53:23,830 | INFO     | .. there are 8 such processes running
[2026-01-10 21:53:49] 2026-01-11 02:53:23,860 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:53:49] 2026-01-11 02:53:23,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:53:49] 2026-01-11 02:53:23,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:53:49] 2026-01-11 02:53:42,450 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:53:49] 2026-01-11 02:53:42,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512540616512)>', '<ExcThread(monitor, started 140512187111168)>']
[2026-01-10 21:53:49] 2026-01-11 02:53:42,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:53:49] 2026-01-11 02:53:42,996 | INFO     | [monitor] control thread has ended
[2026-01-10 21:53:49] 2026-01-11 02:53:47,518 | INFO     | all workflow threads have been joined
[2026-01-10 21:53:49] 2026-01-11 02:53:47,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:53:49] 2026-01-11 02:53:47,533 | INFO     | traces error code: 0
[2026-01-10 21:53:49] 2026-01-11 02:53:47,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:53:49] 2026-01-11 02:53:48,369 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:53:49] 2026-01-11 02:53:48,427 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:53:49] 2026-01-11 02:53:48,478 [wrapper] pilotpid: 3854691
[2026-01-10 21:53:49] 2026-01-11 02:53:48,520 [wrapper] Pilot exit status: 0
[2026-01-10 21:53:49] 2026-01-11 02:53:48,681 [wrapper] pandaids: 6965382745
[2026-01-10 21:53:49] 2026-01-11 02:53:49,291 [wrapper] cleanup supervisor_pilot  823491 3854692
[2026-01-10 21:53:49] 2026-01-11 02:53:49,295 [wrapper] Test setup, not cleaning
[2026-01-10 21:53:49] 2026-01-11 02:53:49,297 [wrapper] apfmon messages muted
[2026-01-10 21:53:49] 2026-01-11 02:53:49,300 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:53:49] 2026-01-11 02:53:49,302 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:53:49]  *** Error codes and diagnostics ***
[2026-01-10 21:53:49]     "exeErrorCode": 0,
[2026-01-10 21:53:49]     "exeErrorDiag": "",
[2026-01-10 21:53:49]     "pilotErrorCode": 0,
[2026-01-10 21:53:49]     "pilotErrorDiag": "",
[2026-01-10 21:53:49]  *** Listing of results directory ***
[2026-01-10 21:53:49] total 455936
[2026-01-10 21:53:49] -rwx------. 1 boincer umatlas     36322 Jan 10 08:09 runpilot2-wrapper.sh
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:53:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:09 run_atlas
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:09 job.xml
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas 225756203 Jan 10 08:10 EVNT.47898824._000816.pool.root.1
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 21:53:49] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:10 shared
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 08:10 input.tar.gz
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:10 boinc_lockfile
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 08:10 pandaJob.out
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas        57 Jan 10 08:10 setup.sh.local
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas    989556 Jan 10 08:10 agis_schedconf.cvmfs.json
[2026-01-10 21:53:49] drwx------. 5 boincer umatlas      4096 Jan 10 08:10 pilot3
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas      6611 Jan 10 21:46 init_data.xml
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas 223191299 Jan 10 21:49 HITS.47898826._040321.pool.root.1
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas       531 Jan 10 21:49 boinc_task_state.xml
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas      1040 Jan 10 21:51 memory_monitor_summary.json
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas   1516240 Jan 10 21:52 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas    960551 Jan 10 21:52 log.47898826._040321.job.log.tgz.1
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas      7821 Jan 10 21:52 heartbeat.json
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:53 boinc_mmap_file
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas        28 Jan 10 21:53 wrapper_checkpoint.txt
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas        95 Jan 10 21:53 pilot_heartbeat.json
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas      5009 Jan 10 21:53 pilotlog.txt
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas   6043823 Jan 10 21:53 log.47898826._040321.job.log.1
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas       357 Jan 10 21:53 output.list
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:53 runtime_log
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas   7024640 Jan 10 21:53 result.tar.gz
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas      9340 Jan 10 21:53 runtime_log.err
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas       657 Jan 10 21:53 l3aNDmOtny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPhmKDme57JVo.diag
[2026-01-10 21:53:49] -rw-r--r--. 1 boincer umatlas     21280 Jan 10 21:53 stderr.txt
[2026-01-10 21:53:49] HITS file was successfully produced:
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas 223191299 Jan 10 21:49 shared/HITS.pool.root.1
[2026-01-10 21:53:49]  *** Contents of shared directory: ***
[2026-01-10 21:53:49] total 445896
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas 225756203 Jan 10 08:10 ATLAS.root_0
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-10 21:53:49] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 08:10 input.tar.gz
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas 223191299 Jan 10 21:49 HITS.pool.root.1
[2026-01-10 21:53:49] -rw-------. 1 boincer umatlas   7024640 Jan 10 21:53 result.tar.gz
21:53:51 (3849471): run_atlas exited; CPU time 78556.277227
21:53:51 (3849471): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN