Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:10 (1682180): wrapper (7.7.26015): starting
08:10:10 (1682180): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:10:10] Arguments: --nthreads 8
[2026-01-10 08:10:10] Threads: 8
[2026-01-10 08:10:10] Checking for CVMFS
[2026-01-10 08:10:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:10:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:10:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:10:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:10:15] 2.13.3.0 12257 94842 673232 154980 2 163 28119462 32935936 33329 16776704 0 648696255 99.727 434270828 23224 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:10:15] CVMFS is ok
[2026-01-10 08:10:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:10:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:10:15] Further information can be found at the LHC@home message board.
[2026-01-10 08:10:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:10:15] Checking for apptainer binary...
[2026-01-10 08:10:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:10:15] Running /usr/bin/apptainer --version
[2026-01-10 08:10:15] apptainer version 1.4.5-2.el9
[2026-01-10 08:10:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:10:16] c-1-3.aglt2.org
[2026-01-10 08:10:16] apptainer works
[2026-01-10 08:10:16] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:10:16] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:10:16] Starting ATLAS job with PandaID=6965382729
[2026-01-10 08:10:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:40:06 (1682180): BOINC client no longer exists - exiting
14:40:06 (1682180): timer handler: client dead, exiting
14:45:15 (718076): wrapper (7.7.26015): starting
14:45:15 (718076): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 14:45:15] Arguments: --nthreads 8
[2026-01-10 14:45:15] Threads: 8
[2026-01-10 14:45:15] This job has been restarted, cleaning up previous attempt
[2026-01-10 14:45:15] Checking for CVMFS
[2026-01-10 14:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:45:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:45:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:45:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:45:18] 2.13.3.0 12257 95237 681592 154990 0 213 31077107 32935937 38939 16776704 0 650266447 99.727 435206350 23225 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 14:45:18] CVMFS is ok
[2026-01-10 14:45:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 14:45:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 14:45:18] Further information can be found at the LHC@home message board.
[2026-01-10 14:45:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:45:18] Checking for apptainer binary...
[2026-01-10 14:45:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 14:45:18] Running /usr/bin/apptainer --version
[2026-01-10 14:45:18] apptainer version 1.4.5-2.el9
[2026-01-10 14:45:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:45:19] c-1-3.aglt2.org
[2026-01-10 14:45:19] apptainer works
[2026-01-10 14:45:19] Set ATHENA_PROC_NUMBER=8
[2026-01-10 14:45:19] Set ATHENA_CORE_NUMBER=8
[2026-01-10 14:45:20] Starting ATLAS job with PandaID=6965382729
[2026-01-10 14:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:50:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:50:52] 2026-01-11 07:50:05,209 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 02:50:52] 2026-01-11 07:50:05,265 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 1730.4754249999994
[2026-01-11 02:50:52] 2026-01-11 07:50:05,462 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965382729/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:50:52] 2026-01-11 07:50:05,463 | INFO     | extracted standard info from prmon json
[2026-01-11 02:50:52] 2026-01-11 07:50:05,463 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:50:52] 2026-01-11 07:50:05,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:50:52] 2026-01-11 07:50:05,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:50:52] 2026-01-11 07:50:05,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:50:52] 2026-01-11 07:50:05,577 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:50:52] 2026-01-11 07:50:05,579 | INFO     | sum of square deviations: 110517248738.19173
[2026-01-11 02:50:52] 2026-01-11 07:50:05,767 | INFO     | sum of deviations: 158419072703.3258
[2026-01-11 02:50:52] 2026-01-11 07:50:05,767 | INFO     | mean x: 1768096139.7630465
[2026-01-11 02:50:52] 2026-01-11 07:50:05,767 | INFO     | mean y: 2513205.126939351
[2026-01-11 02:50:52] 2026-01-11 07:50:05,768 | INFO     | intersect: -2531934169.464615
[2026-01-11 02:50:52] 2026-01-11 07:50:05,837 | INFO     | chi2: 4.635444224739333
[2026-01-11 02:50:52] 2026-01-11 07:50:05,839 | INFO     | sum of square deviations: 108195640950.85771
[2026-01-11 02:50:52] 2026-01-11 07:50:05,984 | INFO     | sum of deviations: 293193974369.7931
[2026-01-11 02:50:52] 2026-01-11 07:50:05,984 | INFO     | mean x: 1768095987.2642045
[2026-01-11 02:50:52] 2026-01-11 07:50:05,984 | INFO     | mean y: 2522032.9957386362
[2026-01-11 02:50:52] 2026-01-11 07:50:05,984 | INFO     | intersect: -4788753151.636971
[2026-01-11 02:50:52] 2026-01-11 07:50:06,011 | INFO     | chi2: 2.5429542678269597
[2026-01-11 02:50:52] 2026-01-11 07:50:06,011 | INFO     | current chi2=2.5429542678269597 (change=45.141088005002175 %)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,013 | INFO     | sum of square deviations: 105906605329.62216
[2026-01-11 02:50:52] 2026-01-11 07:50:06,157 | INFO     | sum of deviations: 290789512075.1114
[2026-01-11 02:50:52] 2026-01-11 07:50:06,157 | INFO     | mean x: 1768095834.7596567
[2026-01-11 02:50:52] 2026-01-11 07:50:06,157 | INFO     | mean y: 2521872.7982832617
[2026-01-11 02:50:52] 2026-01-11 07:50:06,157 | INFO     | intersect: -4852168006.946081
[2026-01-11 02:50:52] 2026-01-11 07:50:06,185 | INFO     | chi2: 2.542896938958905
[2026-01-11 02:50:52] 2026-01-11 07:50:06,185 | INFO     | current chi2=2.542896938958905 (change=0.00225441993903924 %)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,185 | INFO     | right removable region: 698
[2026-01-11 02:50:52] 2026-01-11 07:50:06,187 | INFO     | sum of square deviations: 108195440200.25989
[2026-01-11 02:50:52] 2026-01-11 07:50:06,386 | INFO     | sum of deviations: -13057935712.843338
[2026-01-11 02:50:52] 2026-01-11 07:50:06,386 | INFO     | mean x: 1768096292.268466
[2026-01-11 02:50:52] 2026-01-11 07:50:06,386 | INFO     | mean y: 2524449.71875
[2026-01-11 02:50:52] 2026-01-11 07:50:06,386 | INFO     | intersect: 215913181.03520003
[2026-01-11 02:50:52] 2026-01-11 07:50:06,398 | INFO     | chi2: 2.2948076528102623
[2026-01-11 02:50:52] 2026-01-11 07:50:06,398 | INFO     | current chi2=2.2948076528102623 (change=50.49433146961643 %)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,400 | INFO     | sum of square deviations: 105906376462.28621
[2026-01-11 02:50:52] 2026-01-11 07:50:06,528 | INFO     | sum of deviations: -51812152601.600876
[2026-01-11 02:50:52] 2026-01-11 07:50:06,528 | INFO     | mean x: 1768096444.7739627
[2026-01-11 02:50:52] 2026-01-11 07:50:06,529 | INFO     | mean y: 2527027.2746781115
[2026-01-11 02:50:52] 2026-01-11 07:50:06,550 | INFO     | intersect: 867525773.064068
[2026-01-11 02:50:52] 2026-01-11 07:50:06,551 | INFO     | chi2: 2.178023351396635
[2026-01-11 02:50:52] 2026-01-11 07:50:06,552 | INFO     | current chi2=2.178023351396635 (change=5.08906710636995 %)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,552 | INFO     | left removable region: 20
[2026-01-11 02:50:52] 2026-01-11 07:50:06,553 | INFO     | sum of square deviations: 96645106986.97356
[2026-01-11 02:50:52] 2026-01-11 07:50:06,636 | INFO     | time since job start (43427s) is within the limit (349056.0s)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,645 | INFO     | sum of deviations: 54100048498.98231
[2026-01-11 02:50:52] 2026-01-11 07:50:06,673 | INFO     | mean x: 1768096414.2743363
[2026-01-11 02:50:52] 2026-01-11 07:50:06,673 | INFO     | mean y: 2537927.6828908552
[2026-01-11 02:50:52] 2026-01-11 07:50:06,673 | INFO     | intersect: -987208007.1631556
[2026-01-11 02:50:52] 2026-01-11 07:50:06,675 | INFO     | chi2: 0.030441552092106066
[2026-01-11 02:50:52] 2026-01-11 07:50:06,675 | INFO     | current memory leak: 0.56 B/s (using 678 data points, chi2=0.03)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,676 | INFO     | could have reported an average CPU frequency of 1787 MHz (27 samples)
[2026-01-11 02:50:52] 2026-01-11 07:50:06,702 | INFO     | ..............................
[2026-01-11 02:50:52] 2026-01-11 07:50:06,702 | INFO     | . Timing measurements:
[2026-01-11 02:50:52] 2026-01-11 07:50:06,702 | INFO     | . get job = 0 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,702 | INFO     | . initial setup = 4 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,702 | INFO     | . payload setup = 43 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,703 | INFO     | . stage-in = 0 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,703 | INFO     | . payload execution = 43239 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,703 | INFO     | . stage-out = 9 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,703 | INFO     | . log creation = 2 s
[2026-01-11 02:50:52] 2026-01-11 07:50:06,703 | INFO     | ..............................
[2026-01-11 02:50:52] 2026-01-11 07:50:08,683 | INFO     | 
[2026-01-11 02:50:52] 2026-01-11 07:50:08,683 | INFO     | job summary report
[2026-01-11 02:50:52] 2026-01-11 07:50:08,683 | INFO     | --------------------------------------------------
[2026-01-11 02:50:52] 2026-01-11 07:50:08,683 | INFO     | PanDA job id: 6965382729
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | task id: 47898826
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | errors: (none)
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | pilot state: finished 
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | transexitcode: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | exeerrorcode: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:08,684 | INFO     | exeerrordiag: 
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | exitcode: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | exitmsg: OK
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | cpuconsumptiontime: 99521 s
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | nevents: 400
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | neventsw: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | pid: 757931
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | pgrp: 757931
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | corecount: 8
[2026-01-11 02:50:52] 2026-01-11 07:50:08,685 | INFO     | event service: False
[2026-01-11 02:50:52] 2026-01-11 07:50:08,686 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283777, 3: 2283976, 4: 2284032, 15: 2284032, 27: 2284188, 38: 2284216, 39: 2284506, 49: 2284534, 43288: 2326588, 43290: 2326867
[2026-01-11 02:50:52] 2026-01-11 07:50:08,686 | INFO     | --------------------------------------------------
[2026-01-11 02:50:52] 2026-01-11 07:50:08,686 | INFO     | 
[2026-01-11 02:50:52] 2026-01-11 07:50:08,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 02:50:52] 2026-01-11 07:50:08,821 | INFO     | time since job start (43429s) is within the limit (349056.0s)
[2026-01-11 02:50:52] 2026-01-11 07:50:08,958 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,958 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:50:52] 2026-01-11 07:50:08,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:50:52] 2026-01-11 07:50:08,961 | INFO     | job 6965382729 has completed (purged errors)
[2026-01-11 02:50:52] 2026-01-11 07:50:08,961 | INFO     | overall cleanup function is called
[2026-01-11 02:50:52] 2026-01-11 07:50:10,007 | INFO     | --- collectZombieJob: --- 10, [757931]
[2026-01-11 02:50:52] 2026-01-11 07:50:10,007 | INFO     | zombie collector waiting for pid 757931
[2026-01-11 02:50:52] 2026-01-11 07:50:10,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:50:52] 2026-01-11 07:50:10,007 | INFO     | collected zombie processes
[2026-01-11 02:50:52] 2026-01-11 07:50:10,007 | INFO     | will attempt to kill all subprocesses of pid=757931
[2026-01-11 02:50:52] 2026-01-11 07:50:15,307 | INFO     | process IDs to be killed: [757931] (in reverse order)
[2026-01-11 02:50:52] 2026-01-11 07:50:16,061 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:50:52] 2026-01-11 07:50:16,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:50:52] 2026-01-11 07:50:16,183 | INFO     | did not find any defunct processes belonging to 757931
[2026-01-11 02:50:52] 2026-01-11 07:50:16,289 | INFO     | did not find any defunct processes belonging to 757931
[2026-01-11 02:50:52] 2026-01-11 07:50:16,289 | INFO     | ready for new job
[2026-01-11 02:50:52] 2026-01-11 07:50:16,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:50:52] 2026-01-11 07:50:16,311 | INFO     | ***************************************
[2026-01-11 02:50:52] 2026-01-11 07:50:16,311 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:50:52] 2026-01-11 07:50:16,311 | INFO     | ***************************************
[2026-01-11 02:50:52] 2026-01-11 07:50:16,311 | INFO     | 
[2026-01-11 02:50:52] 2026-01-11 07:50:16,332 | INFO     | architecture information:
[2026-01-11 02:50:52] 2026-01-11 07:50:16,336 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:50:52] 2026-01-11 07:50:16,493 | INFO     | cat /etc/os-release:
[2026-01-11 02:50:52] NAME="CentOS Linux"
[2026-01-11 02:50:52] VERSION="7 (Core)"
[2026-01-11 02:50:52] ID="centos"
[2026-01-11 02:50:52] ID_LIKE="rhel fedora"
[2026-01-11 02:50:52] VERSION_ID="7"
[2026-01-11 02:50:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:50:52] ANSI_COLOR="0;31"
[2026-01-11 02:50:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:50:52] HOME_URL="https://www.centos.org/"
[2026-01-11 02:50:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:50:52] 
[2026-01-11 02:50:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:50:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:50:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:50:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:50:52] 
[2026-01-11 02:50:52] 2026-01-11 07:50:16,494 | INFO     | ***************************************
[2026-01-11 02:50:52] 2026-01-11 07:50:16,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 02:50:52] 2026-01-11 07:50:17,117 | INFO     | sufficient remaining disk space (72635908096 B)
[2026-01-11 02:50:52] 2026-01-11 07:50:17,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:50:52] 2026-01-11 07:50:17,118 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:50:52] 2026-01-11 07:50:17,118 | INFO     | update_server=False
[2026-01-11 02:50:52] 2026-01-11 07:50:17,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:50:52] 2026-01-11 07:50:17,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:50:52] 2026-01-11 07:50:17,119 | INFO     | aborting loop
[2026-01-11 02:50:52] 2026-01-11 07:50:17,119 | INFO     | all payload control threads have been joined
[2026-01-11 02:50:52] 2026-01-11 07:50:17,524 | INFO     | all data control threads have been joined
[2026-01-11 02:50:52] 2026-01-11 07:50:17,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:50:52] 2026-01-11 07:50:17,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:50:52] 2026-01-11 07:50:17,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:50:52] 2026-01-11 07:50:18,124 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,130 | INFO     | [payload] control thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,165 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,193 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,195 | INFO     | [job] validate thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,222 | INFO     | all job control threads have been joined
[2026-01-11 02:50:52] 2026-01-11 07:50:18,418 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,530 | INFO     | [data] control thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:18,797 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:19,228 | INFO     | [job] control thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:19,234 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:19,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:19,330 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:19,816 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:21,693 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:50:52] 2026-01-11 07:50:40,977 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:50:52] 2026-01-11 07:50:42,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821721241408)>', '<ExcThread(monitor, started 139820579944192)>']
[2026-01-11 02:50:52] 2026-01-11 07:50:46,345 | INFO     | PID=728777 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 02:50:52] 2026-01-11 07:50:46,346 | INFO     | .. there are 68 such processes running
[2026-01-11 02:50:52] 2026-01-11 07:50:46,376 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:50:52] 2026-01-11 07:50:46,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:50:52] 2026-01-11 07:50:46,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:50:52] 2026-01-11 07:50:46,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:50:52] 2026-01-11 07:50:46,377 | INFO     | [monitor] control thread has ended
[2026-01-11 02:50:52] 2026-01-11 07:50:47,724 | INFO     | all workflow threads have been joined
[2026-01-11 02:50:52] 2026-01-11 07:50:47,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:50:52] 2026-01-11 07:50:47,724 | INFO     | traces error code: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:47,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:50:52] 2026-01-11 07:50:51,625 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:50:52] 2026-01-11 07:50:51,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:50:52] 2026-01-11 07:50:51,648 [wrapper] pilotpid: 728777
[2026-01-11 02:50:52] 2026-01-11 07:50:51,652 [wrapper] Pilot exit status: 0
[2026-01-11 02:50:52] 2026-01-11 07:50:51,675 [wrapper] pandaids: 6965382729 6965382729
[2026-01-11 02:50:52] 2026-01-11 07:50:52,037 [wrapper] cleanup supervisor_pilot  623637 728778
[2026-01-11 02:50:52] 2026-01-11 07:50:52,058 [wrapper] Test setup, not cleaning
[2026-01-11 02:50:52] 2026-01-11 07:50:52,076 [wrapper] apfmon messages muted
[2026-01-11 02:50:52] 2026-01-11 07:50:52,098 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:50:52] 2026-01-11 07:50:52,113 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:50:52]  *** Error codes and diagnostics ***
[2026-01-11 02:50:52]     "exeErrorCode": 0,
[2026-01-11 02:50:52]     "exeErrorDiag": "",
[2026-01-11 02:50:52]     "pilotErrorCode": 0,
[2026-01-11 02:50:52]     "pilotErrorDiag": "",
[2026-01-11 02:50:52]  *** Listing of results directory ***
[2026-01-11 02:50:53] total 665548
[2026-01-11 02:50:53] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-11 02:50:53] -rwx------. 1 boincer umatlas     36322 Jan 10 08:09 runpilot2-wrapper.sh
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:09 queuedata.json
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:50:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:10 run_atlas
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:10 job.xml
[2026-01-11 02:50:53] -rw-r--r--. 3 boincer umatlas 224776258 Jan 10 08:10 EVNT.47898824._001077.pool.root.1
[2026-01-11 02:50:53] -rw-r--r--. 3 boincer umatlas 224776258 Jan 10 08:10 ATLAS.root_0
[2026-01-11 02:50:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-11 02:50:53] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:10 shared
[2026-01-11 02:50:53] -rw-r--r--. 2 boincer umatlas    592395 Jan 10 08:10 input.tar.gz
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:10 boinc_lockfile
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 14:45 pandaJob.out
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas        57 Jan 10 14:45 setup.sh.local
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas    989540 Jan 10 14:46 agis_schedconf.cvmfs.json
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas 218074536 Jan 11 02:46 HITS.47898826._040305.pool.root.1
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas       532 Jan 11 02:46 boinc_task_state.xml
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas      6839 Jan 11 02:47 init_data.xml
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas      1042 Jan 11 02:49 memory_monitor_summary.json
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas   1516240 Jan 11 02:49 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas    735510 Jan 11 02:49 log.47898826._040305.job.log.tgz.1
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas      7818 Jan 11 02:50 heartbeat.json
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas        96 Jan 11 02:50 pilot_heartbeat.json
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas      4823 Jan 11 02:50 pilotlog.txt
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:50 boinc_mmap_file
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas        29 Jan 11 02:50 wrapper_checkpoint.txt
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas   4248699 Jan 11 02:50 log.47898826._040305.job.log.1
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas       357 Jan 11 02:50 output.list
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:50 runtime_log
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas   5007360 Jan 11 02:50 result.tar.gz
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas      9413 Jan 11 02:50 runtime_log.err
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas       782 Jan 11 02:50 HjTNDmOtny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIhmKDmZ4DVEn.diag
[2026-01-11 02:50:53] -rw-r--r--. 1 boincer umatlas     23491 Jan 11 02:50 stderr.txt
[2026-01-11 02:50:53] HITS file was successfully produced:
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas 218074536 Jan 11 02:46 shared/HITS.pool.root.1
[2026-01-11 02:50:53]  *** Contents of shared directory: ***
[2026-01-11 02:50:53] total 437968
[2026-01-11 02:50:53] -rw-r--r--. 3 boincer umatlas 224776258 Jan 10 08:10 ATLAS.root_0
[2026-01-11 02:50:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:10 start_atlas.sh
[2026-01-11 02:50:53] -rw-r--r--. 2 boincer umatlas    592395 Jan 10 08:10 input.tar.gz
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas 218074536 Jan 11 02:46 HITS.pool.root.1
[2026-01-11 02:50:53] -rw-------. 1 boincer umatlas   5007360 Jan 11 02:50 result.tar.gz
02:50:54 (718076): run_atlas exited; CPU time 102656.752850
02:50:54 (718076): called boinc_finish(0)

</stderr_txt>
]]>

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