Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:47:44 (2722129): wrapper (7.7.26015): starting
06:47:44 (2722129): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:47:44] Arguments: --nthreads 8
[2026-01-10 06:47:44] Threads: 8
[2026-01-10 06:47:44] Checking for CVMFS
[2026-01-10 06:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:47:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:47:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:47:44] 2.13.3.0 6825 24308 185084 154978 2 343 30352597 40960000 12984 16776704 0 18099619 99.679 17121167 43895 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 06:47:44] CVMFS is ok
[2026-01-10 06:47:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:47:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:47:44] Further information can be found at the LHC@home message board.
[2026-01-10 06:47:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:47:44] Checking for apptainer binary...
[2026-01-10 06:47:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:47:44] Running /usr/bin/apptainer --version
[2026-01-10 06:47:44] apptainer version 1.4.5-2.el9
[2026-01-10 06:47:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:47:45] c-210-31-2.aglt2.org
[2026-01-10 06:47:45] apptainer works
[2026-01-10 06:47:45] Set ATHENA_PROC_NUMBER=8
[2026-01-10 06:47:45] Set ATHENA_CORE_NUMBER=8
[2026-01-10 06:47:45] Starting ATLAS job with PandaID=6963144065
[2026-01-10 06:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:15:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:15:56] 2026-01-10 18:15:23,216 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 13:15:56] 2026-01-10 18:15:23,223 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2964.1340357142867
[2026-01-10 13:15:56] 2026-01-10 18:15:23,241 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963144065/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,242 | INFO     | extracted standard info from prmon json
[2026-01-10 13:15:56] 2026-01-10 18:15:23,242 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:15:56] 2026-01-10 18:15:23,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:15:56] 2026-01-10 18:15:23,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:15:56] 2026-01-10 18:15:23,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:15:56] 2026-01-10 18:15:23,259 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:15:56] 2026-01-10 18:15:23,259 | INFO     | sum of square deviations: 17150336509.4382
[2026-01-10 13:15:56] 2026-01-10 18:15:23,263 | INFO     | sum of deviations: -22014053439.459316
[2026-01-10 13:15:56] 2026-01-10 18:15:23,263 | INFO     | mean x: 1768057303.7979002
[2026-01-10 13:15:56] 2026-01-10 18:15:23,263 | INFO     | mean y: 2522079.175853018
[2026-01-10 13:15:56] 2026-01-10 18:15:23,263 | INFO     | intersect: 2271988217.5465875
[2026-01-10 13:15:56] 2026-01-10 18:15:23,271 | INFO     | chi2: 2.158000186184424
[2026-01-10 13:15:56] 2026-01-10 18:15:23,272 | INFO     | sum of square deviations: 16484072546.212795
[2026-01-10 13:15:56] 2026-01-10 18:15:23,275 | INFO     | sum of deviations: 2263144168.3085155
[2026-01-10 13:15:56] 2026-01-10 18:15:23,275 | INFO     | mean x: 1768057151.3085105
[2026-01-10 13:15:56] 2026-01-10 18:15:23,275 | INFO     | mean y: 2527577.4973404254
[2026-01-10 13:15:56] 2026-01-10 18:15:23,275 | INFO     | intersect: -240213906.4413076
[2026-01-10 13:15:56] 2026-01-10 18:15:23,279 | INFO     | chi2: 1.4811900079340838
[2026-01-10 13:15:56] 2026-01-10 18:15:23,279 | INFO     | current chi2=1.4811900079340838 (change=31.362841513327812 %)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,279 | INFO     | sum of square deviations: 15835228354.79246
[2026-01-10 13:15:56] 2026-01-10 18:15:23,286 | INFO     | sum of deviations: 2316153868.9811325
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | mean x: 1768056998.8113208
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | mean y: 2527589.9568733154
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | intersect: -256078851.7454119
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | chi2: 1.4812628949898905
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | current chi2=1.4812628949898905 (change=-0.00492084441673483 %)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,287 | INFO     | right removable region: 370
[2026-01-10 13:15:56] 2026-01-10 18:15:23,288 | INFO     | sum of square deviations: 16483887106.21279
[2026-01-10 13:15:56] 2026-01-10 18:15:23,295 | INFO     | sum of deviations: -69046469402.76588
[2026-01-10 13:15:56] 2026-01-10 18:15:23,295 | INFO     | mean x: 1768057456.3085105
[2026-01-10 13:15:56] 2026-01-10 18:15:23,295 | INFO     | mean y: 2532757.489361702
[2026-01-10 13:15:56] 2026-01-10 18:15:23,295 | INFO     | intersect: 7408439160.071209
[2026-01-10 13:15:56] 2026-01-10 18:15:23,296 | INFO     | chi2: 0.9250721034683664
[2026-01-10 13:15:56] 2026-01-10 18:15:23,296 | INFO     | current chi2=0.9250721034683664 (change=57.13289973788217 %)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,297 | INFO     | sum of square deviations: 15834972398.167122
[2026-01-10 13:15:56] 2026-01-10 18:15:23,304 | INFO     | sum of deviations: -50871647748.22104
[2026-01-10 13:15:56] 2026-01-10 18:15:23,304 | INFO     | mean x: 1768057608.814016
[2026-01-10 13:15:56] 2026-01-10 18:15:23,304 | INFO     | mean y: 2528481.5040431265
[2026-01-10 13:15:56] 2026-01-10 18:15:23,304 | INFO     | intersect: 5682614408.560002
[2026-01-10 13:15:56] 2026-01-10 18:15:23,305 | INFO     | chi2: 0.8631518408515556
[2026-01-10 13:15:56] 2026-01-10 18:15:23,305 | INFO     | current chi2=0.8631518408515556 (change=6.693560684043288 %)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,305 | INFO     | left removable region: 20
[2026-01-10 13:15:56] 2026-01-10 18:15:23,305 | INFO     | sum of square deviations: 13295408582.857162
[2026-01-10 13:15:56] 2026-01-10 18:15:23,309 | INFO     | sum of deviations: 6241082022.114285
[2026-01-10 13:15:56] 2026-01-10 18:15:23,309 | INFO     | mean x: 1768057578.3428571
[2026-01-10 13:15:56] 2026-01-10 18:15:23,309 | INFO     | mean y: 2525913.4657142856
[2026-01-10 13:15:56] 2026-01-10 18:15:23,310 | INFO     | intersect: -827429202.0533612
[2026-01-10 13:15:56] 2026-01-10 18:15:23,310 | INFO     | chi2: 0.0029739113645020528
[2026-01-10 13:15:56] 2026-01-10 18:15:23,310 | INFO     | current memory leak: 0.47 B/s (using 350 data points, chi2=0.00)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | could have reported an average CPU frequency of 2956 MHz (16 samples)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | ..............................
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . Timing measurements:
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . get job = 0 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . initial setup = 3 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . payload setup = 8 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . stage-in = 0 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . payload execution = 23191 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . stage-out = 4 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,311 | INFO     | . log creation = 1 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,312 | INFO     | ..............................
[2026-01-10 13:15:56] 2026-01-10 18:15:23,874 | INFO     | 
[2026-01-10 13:15:56] 2026-01-10 18:15:23,874 | INFO     | job summary report
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | --------------------------------------------------
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | PanDA job id: 6963144065
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | task id: 47898826
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | errors: (none)
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | pilot state: finished 
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | transexitcode: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | exeerrorcode: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | exeerrordiag: 
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | exitcode: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | exitmsg: OK
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | cpuconsumptiontime: 56360 s
[2026-01-10 13:15:56] 2026-01-10 18:15:23,875 | INFO     | nevents: 400
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | neventsw: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | pid: 2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | pgrp: 2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | corecount: 8
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | event service: False
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | sizes: {0: 2283797, 1: 2283996, 7: 2284258, 12: 2284286, 23204: 2318992, 23209: 2328018, 23213: 2328202, 23225: 2328396}
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | --------------------------------------------------
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | 
[2026-01-10 13:15:56] 2026-01-10 18:15:23,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 13:15:56] 2026-01-10 18:15:24,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:15:56] 2026-01-10 18:15:24,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:15:56] 2026-01-10 18:15:24,027 | INFO     | job 6963144065 has completed (purged errors)
[2026-01-10 13:15:56] 2026-01-10 18:15:24,027 | INFO     | overall cleanup function is called
[2026-01-10 13:15:56] 2026-01-10 18:15:24,124 | INFO     | PID=2726647 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:15:56] 2026-01-10 18:15:24,124 | INFO     | .. there are 9 such processes running
[2026-01-10 13:15:56] 2026-01-10 18:15:25,045 | INFO     | --- collectZombieJob: --- 10, [2733631]
[2026-01-10 13:15:56] 2026-01-10 18:15:25,046 | INFO     | zombie collector waiting for pid 2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:25,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:15:56] 2026-01-10 18:15:25,046 | INFO     | collected zombie processes
[2026-01-10 13:15:56] 2026-01-10 18:15:25,046 | INFO     | will attempt to kill all subprocesses of pid=2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:25,264 | INFO     | process IDs to be killed: [2733631] (in reverse order)
[2026-01-10 13:15:56] 2026-01-10 18:15:25,344 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:15:56] 2026-01-10 18:15:25,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:15:56] 2026-01-10 18:15:25,396 | INFO     | did not find any defunct processes belonging to 2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:25,405 | INFO     | did not find any defunct processes belonging to 2733631
[2026-01-10 13:15:56] 2026-01-10 18:15:25,405 | INFO     | ready for new job
[2026-01-10 13:15:56] 2026-01-10 18:15:25,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:15:56] 2026-01-10 18:15:25,408 | INFO     | ***************************************
[2026-01-10 13:15:56] 2026-01-10 18:15:25,408 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:15:56] 2026-01-10 18:15:25,408 | INFO     | ***************************************
[2026-01-10 13:15:56] 2026-01-10 18:15:25,408 | INFO     | 
[2026-01-10 13:15:56] 2026-01-10 18:15:25,411 | INFO     | architecture information:
[2026-01-10 13:15:56] 2026-01-10 18:15:25,412 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:15:56] 2026-01-10 18:15:25,428 | INFO     | cat /etc/os-release:
[2026-01-10 13:15:56] NAME="CentOS Linux"
[2026-01-10 13:15:56] VERSION="7 (Core)"
[2026-01-10 13:15:56] ID="centos"
[2026-01-10 13:15:56] ID_LIKE="rhel fedora"
[2026-01-10 13:15:56] VERSION_ID="7"
[2026-01-10 13:15:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:15:56] ANSI_COLOR="0;31"
[2026-01-10 13:15:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:15:56] HOME_URL="https://www.centos.org/"
[2026-01-10 13:15:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:15:56] 
[2026-01-10 13:15:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:15:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:15:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:15:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:15:56] 
[2026-01-10 13:15:56] 2026-01-10 18:15:25,429 | INFO     | ***************************************
[2026-01-10 13:15:56] 2026-01-10 18:15:25,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 13:15:56] 2026-01-10 18:15:25,955 | INFO     | sufficient remaining disk space (74767663104 B)
[2026-01-10 13:15:56] 2026-01-10 18:15:25,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:15:56] 2026-01-10 18:15:25,956 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:15:56] 2026-01-10 18:15:25,956 | INFO     | update_server=False
[2026-01-10 13:15:56] 2026-01-10 18:15:25,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:15:56] 2026-01-10 18:15:25,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:15:56] 2026-01-10 18:15:26,142 | INFO     | all data control threads have been joined
[2026-01-10 13:15:56] 2026-01-10 18:15:26,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:15:56] 2026-01-10 18:15:26,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:15:56] 2026-01-10 18:15:26,324 | INFO     | aborting loop
[2026-01-10 13:15:56] 2026-01-10 18:15:26,660 | INFO     | all job control threads have been joined
[2026-01-10 13:15:56] 2026-01-10 18:15:26,959 | INFO     | all payload control threads have been joined
[2026-01-10 13:15:56] 2026-01-10 18:15:26,961 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,148 | INFO     | [data] control thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,330 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,425 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,430 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,526 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,635 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,666 | INFO     | [job] control thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,963 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:27,965 | INFO     | [payload] control thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:28,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:15:56] 2026-01-10 18:15:28,419 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:28,428 | INFO     | [job] validate thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:28,436 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:29,412 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:30,234 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:15:56] 2026-01-10 18:15:43,285 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:15:56] 2026-01-10 18:15:43,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359735965504)>', '<ExcThread(monitor, started 140359355049728)>']
[2026-01-10 13:15:56] 2026-01-10 18:15:48,843 | INFO     | all workflow threads have been joined
[2026-01-10 13:15:56] 2026-01-10 18:15:48,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:15:56] 2026-01-10 18:15:48,844 | INFO     | traces error code: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:48,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:15:56] 2026-01-10 18:15:56,480 | INFO     | PID=2726647 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:15:56] 2026-01-10 18:15:56,480 | INFO     | .. there are 9 such processes running
[2026-01-10 13:15:56] 2026-01-10 18:15:56,481 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:15:56] 2026-01-10 18:15:56,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:15:56] 2026-01-10 18:15:56,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:15:56] 2026-01-10 18:15:56,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:15:56] 2026-01-10 18:15:56,481 | INFO     | [monitor] control thread has ended
[2026-01-10 13:15:56] 2026-01-10 18:15:56,626 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:15:56] 2026-01-10 18:15:56,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:15:56] 2026-01-10 18:15:56,631 [wrapper] pilotpid: 2726647
[2026-01-10 13:15:56] 2026-01-10 18:15:56,633 [wrapper] Pilot exit status: 0
[2026-01-10 13:15:56] 2026-01-10 18:15:56,751 [wrapper] pandaids: 6963144065
[2026-01-10 13:15:56] 2026-01-10 18:15:56,845 [wrapper] cleanup supervisor_pilot 3316257 2726648
[2026-01-10 13:15:56] 2026-01-10 18:15:56,848 [wrapper] Test setup, not cleaning
[2026-01-10 13:15:56] 2026-01-10 18:15:56,859 [wrapper] apfmon messages muted
[2026-01-10 13:15:56] 2026-01-10 18:15:56,862 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:15:56] 2026-01-10 18:15:56,865 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:15:56]  *** Error codes and diagnostics ***
[2026-01-10 13:15:56]     "exeErrorCode": 0,
[2026-01-10 13:15:56]     "exeErrorDiag": "",
[2026-01-10 13:15:56]     "pilotErrorCode": 0,
[2026-01-10 13:15:56]     "pilotErrorDiag": "",
[2026-01-10 13:15:56]  *** Listing of results directory ***
[2026-01-10 13:15:56] total 446140
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 07:19 pilot3.tar.gz
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 07:22 queuedata.json
[2026-01-10 13:15:56] -rwx------. 1 boincer umatlas     36322 Jan  8 07:22 runpilot2-wrapper.sh
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas       100 Jan 10 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:15:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 06:47 run_atlas
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas       105 Jan 10 06:47 job.xml
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas 227960332 Jan 10 06:47 EVNT.47898824._001005.pool.root.1
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:47 start_atlas.sh
[2026-01-10 13:15:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 06:47 shared
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 06:47 input.tar.gz
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas         0 Jan 10 06:47 boinc_lockfile
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 06:47 pandaJob.out
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas        57 Jan 10 06:47 setup.sh.local
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas    989564 Jan 10 06:47 agis_schedconf.cvmfs.json
[2026-01-10 13:15:56] drwx------. 5 boincer umatlas      4096 Jan 10 06:48 pilot3
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 13:10 init_data.xml
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas 217910262 Jan 10 13:14 HITS.47898826._025289.pool.root.1
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:14 boinc_task_state.xml
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas      1036 Jan 10 13:14 memory_monitor_summary.json
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:15 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas    580516 Jan 10 13:15 log.47898826._025289.job.log.tgz.1
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas      7820 Jan 10 13:15 heartbeat.json
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:15 boinc_mmap_file
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:15 wrapper_checkpoint.txt
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas        95 Jan 10 13:15 pilot_heartbeat.json
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas       822 Jan 10 13:15 pilotlog.txt
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas   2951570 Jan 10 13:15 log.47898826._025289.job.log.1
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas       357 Jan 10 13:15 output.list
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:15 runtime_log
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas   3553280 Jan 10 13:15 result.tar.gz
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 13:15 runtime_log.err
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas       660 Jan 10 13:15 KXMLDmbD4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWLfKDmpd2y3m.diag
[2026-01-10 13:15:56] -rw-r--r--. 1 boincer umatlas     21268 Jan 10 13:15 stderr.txt
[2026-01-10 13:15:56] HITS file was successfully produced:
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas 217910262 Jan 10 13:14 shared/HITS.pool.root.1
[2026-01-10 13:15:56]  *** Contents of shared directory: ***
[2026-01-10 13:15:56] total 439496
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas 227960332 Jan 10 06:47 ATLAS.root_0
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:47 start_atlas.sh
[2026-01-10 13:15:56] -rw-r--r--. 2 boincer umatlas    592390 Jan 10 06:47 input.tar.gz
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas 217910262 Jan 10 13:14 HITS.pool.root.1
[2026-01-10 13:15:56] -rw-------. 1 boincer umatlas   3553280 Jan 10 13:15 result.tar.gz
13:15:58 (2722129): run_atlas exited; CPU time 56697.650427
13:15:58 (2722129): called boinc_finish(0)

</stderr_txt>
]]>

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