Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:46:50 (1381530): wrapper (7.7.26015): starting
06:46:50 (1381530): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 06:46:50] Arguments: --nthreads 9
[2026-01-10 06:46:50] Threads: 9
[2026-01-10 06:46:50] Checking for CVMFS
[2026-01-10 06:46:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:46:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:46:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:46:52] 2.13.3.0 11830 94674 359832 154978 0 271 18942513 32935936 20365 16776704 0 418729867 99.489 559850801 33370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 06:46:52] CVMFS is ok
[2026-01-10 06:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:46:52] Further information can be found at the LHC@home message board.
[2026-01-10 06:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:46:52] Checking for apptainer binary...
[2026-01-10 06:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:46:52] Running /usr/bin/apptainer --version
[2026-01-10 06:46:52] apptainer version 1.4.5-2.el9
[2026-01-10 06:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:46:52] c6-8-25-1.aglt2.org
[2026-01-10 06:46:52] apptainer works
[2026-01-10 06:46:52] Set ATHENA_PROC_NUMBER=9
[2026-01-10 06:46:52] Set ATHENA_CORE_NUMBER=9
[2026-01-10 06:46:52] Starting ATLAS job with PandaID=6962931319
[2026-01-10 06:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:23:20]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:23:20] 2026-01-10 17:22:32,599 | INFO     | time since job start (20107s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:34,417 | INFO     | monitor loop #1156: job 0:6962931319 is in state 'finished'
[2026-01-10 12:23:20] 2026-01-10 17:22:34,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:23:20] 2026-01-10 17:22:34,609 | INFO     | time since job start (20109s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:36,618 | INFO     | time since job start (20111s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:36,922 | INFO     | monitor loop #1157: job 0:6962931319 is in state 'finished'
[2026-01-10 12:23:20] 2026-01-10 17:22:36,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:23:20] 2026-01-10 17:22:38,625 | INFO     | time since job start (20113s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:39,438 | INFO     | monitor loop #1158: job 0:6962931319 is in state 'finished'
[2026-01-10 12:23:20] 2026-01-10 17:22:39,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:23:20] 2026-01-10 17:22:40,632 | INFO     | time since job start (20115s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:41,950 | INFO     | monitor loop #1159: job 0:6962931319 is in state 'finished'
[2026-01-10 12:23:20] 2026-01-10 17:22:41,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,639 | INFO     | time since job start (20117s) is within the limit (174528.0s)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,714 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 12:23:20] 2026-01-10 17:22:42,725 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2687.4045104166657
[2026-01-10 12:23:20] 2026-01-10 17:22:42,763 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962931319/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,764 | INFO     | extracted standard info from prmon json
[2026-01-10 12:23:20] 2026-01-10 17:22:42,764 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:23:20] 2026-01-10 17:22:42,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:23:20] 2026-01-10 17:22:42,779 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:23:20] 2026-01-10 17:22:42,780 | INFO     | sum of square deviations: 10944402005.756155
[2026-01-10 12:23:20] 2026-01-10 17:22:42,786 | INFO     | sum of deviations: -234929578480.65854
[2026-01-10 12:23:20] 2026-01-10 17:22:42,787 | INFO     | mean x: 1768055698.3414633
[2026-01-10 12:23:20] 2026-01-10 17:22:42,787 | INFO     | mean y: 2715787.7469512196
[2026-01-10 12:23:20] 2026-01-10 17:22:42,787 | INFO     | intersect: 37955322035.50953
[2026-01-10 12:23:20] 2026-01-10 17:22:42,787 | INFO     | chi2: 14.681335460529398
[2026-01-10 12:23:20] 2026-01-10 17:22:42,788 | INFO     | sum of square deviations: 10451956745.62846
[2026-01-10 12:23:20] 2026-01-10 17:22:42,795 | INFO     | sum of deviations: -133139885683.291
[2026-01-10 12:23:20] 2026-01-10 17:22:42,795 | INFO     | mean x: 1768055545.8978329
[2026-01-10 12:23:20] 2026-01-10 17:22:42,795 | INFO     | mean y: 2747330.86996904
[2026-01-10 12:23:20] 2026-01-10 17:22:42,795 | INFO     | intersect: 22524722784.031105
[2026-01-10 12:23:20] 2026-01-10 17:22:42,796 | INFO     | chi2: 11.33532911070062
[2026-01-10 12:23:20] 2026-01-10 17:22:42,796 | INFO     | current chi2=11.33532911070062 (change=22.790885466955498 %)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,796 | INFO     | right removable region: 322
[2026-01-10 12:23:20] 2026-01-10 17:22:42,798 | INFO     | sum of square deviations: 10451208390.829689
[2026-01-10 12:23:20] 2026-01-10 17:22:42,801 | INFO     | sum of deviations: -326750264047.1022
[2026-01-10 12:23:20] 2026-01-10 17:22:42,801 | INFO     | mean x: 1768055850.9009287
[2026-01-10 12:23:20] 2026-01-10 17:22:42,801 | INFO     | mean y: 2744122.3405572753
[2026-01-10 12:23:20] 2026-01-10 17:22:42,801 | INFO     | intersect: 55279865630.9702
[2026-01-10 12:23:20] 2026-01-10 17:22:42,802 | INFO     | chi2: 12.203696048988231
[2026-01-10 12:23:20] 2026-01-10 17:22:42,802 | INFO     | current chi2=12.203696048988231 (change=16.876117422711797 %)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,802 | INFO     | left removable region: 10
[2026-01-10 12:23:20] 2026-01-10 17:22:42,807 | INFO     | sum of square deviations: 9419892145.98717
[2026-01-10 12:23:20] 2026-01-10 17:22:42,809 | INFO     | sum of deviations: -209161217068.43588
[2026-01-10 12:23:20] 2026-01-10 17:22:42,809 | INFO     | mean x: 1768055820.4935896
[2026-01-10 12:23:20] 2026-01-10 17:22:42,810 | INFO     | mean y: 2788220.782051282
[2026-01-10 12:23:20] 2026-01-10 17:22:42,810 | INFO     | intersect: 39261062257.06261
[2026-01-10 12:23:20] 2026-01-10 17:22:42,814 | INFO     | chi2: 7.739023746020747
[2026-01-10 12:23:20] 2026-01-10 17:22:42,815 | INFO     | current memory leak: -22.20 B/s (using 312 data points, chi2=7.74)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,815 | INFO     | could have reported an average CPU frequency of 2651 MHz (14 samples)
[2026-01-10 12:23:20] 2026-01-10 17:22:42,815 | INFO     | ..............................
[2026-01-10 12:23:20] 2026-01-10 17:22:42,815 | INFO     | . Timing measurements:
[2026-01-10 12:23:20] 2026-01-10 17:22:42,815 | INFO     | . get job = 0 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . initial setup = 3 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . payload setup = 19 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . stage-in = 0 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . payload execution = 20010 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . stage-out = 4 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | . log creation = 1 s
[2026-01-10 12:23:20] 2026-01-10 17:22:42,816 | INFO     | ..............................
[2026-01-10 12:23:20] 2026-01-10 17:22:43,155 | INFO     | 
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | job summary report
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | --------------------------------------------------
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | PanDA job id: 6962931319
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | task id: 47961985
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | errors: (none)
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | pilot state: finished 
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | transexitcode: 0
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | exeerrorcode: 0
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | exeerrordiag: 
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | exitcode: 0
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | exitmsg: OK
[2026-01-10 12:23:20] 2026-01-10 17:22:43,156 | INFO     | cpuconsumptiontime: 53901 s
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | nevents: 150
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | neventsw: 0
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | pid: 1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | pgrp: 1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | corecount: 9
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | event service: False
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | sizes: {0: 2284546, 1: 2284546, 12: 2284574, 16: 2284864, 23: 2284892, 20034: 2318901, 20040: 2327895, 20043: 2327951, 20078: 2328197}
[2026-01-10 12:23:20] 2026-01-10 17:22:43,157 | INFO     | --------------------------------------------------
[2026-01-10 12:23:20] 2026-01-10 17:22:43,160 | INFO     | 
[2026-01-10 12:23:20] 2026-01-10 17:22:43,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:23:20] 2026-01-10 17:22:43,225 | INFO     | job 6962931319 has completed (purged errors)
[2026-01-10 12:23:20] 2026-01-10 17:22:43,226 | INFO     | overall cleanup function is called
[2026-01-10 12:23:20] 2026-01-10 17:22:44,255 | INFO     | --- collectZombieJob: --- 10, [1417148]
[2026-01-10 12:23:20] 2026-01-10 17:22:44,255 | INFO     | zombie collector waiting for pid 1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:44,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:23:20] 2026-01-10 17:22:44,256 | INFO     | collected zombie processes
[2026-01-10 12:23:20] 2026-01-10 17:22:44,256 | INFO     | will attempt to kill all subprocesses of pid=1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:45,995 | INFO     | PID=1391055 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:23:20] 2026-01-10 17:22:45,996 | INFO     | .. there are 22 such processes running
[2026-01-10 12:23:20] 2026-01-10 17:22:46,047 | INFO     | process IDs to be killed: [1417148] (in reverse order)
[2026-01-10 12:23:20] 2026-01-10 17:22:46,288 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:23:20] 2026-01-10 17:22:46,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:23:20] 2026-01-10 17:22:46,323 | INFO     | did not find any defunct processes belonging to 1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:46,361 | INFO     | did not find any defunct processes belonging to 1417148
[2026-01-10 12:23:20] 2026-01-10 17:22:46,362 | INFO     | ready for new job
[2026-01-10 12:23:20] 2026-01-10 17:22:46,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:23:20] 2026-01-10 17:22:46,368 | INFO     | ***************************************
[2026-01-10 12:23:20] 2026-01-10 17:22:46,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:23:20] 2026-01-10 17:22:46,369 | INFO     | ***************************************
[2026-01-10 12:23:20] 2026-01-10 17:22:46,369 | INFO     | 
[2026-01-10 12:23:20] 2026-01-10 17:22:46,379 | INFO     | architecture information:
[2026-01-10 12:23:20] 2026-01-10 17:22:46,384 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:23:20] 2026-01-10 17:22:46,452 | INFO     | cat /etc/os-release:
[2026-01-10 12:23:20] NAME="CentOS Linux"
[2026-01-10 12:23:20] VERSION="7 (Core)"
[2026-01-10 12:23:20] ID="centos"
[2026-01-10 12:23:20] ID_LIKE="rhel fedora"
[2026-01-10 12:23:20] VERSION_ID="7"
[2026-01-10 12:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:23:20] ANSI_COLOR="0;31"
[2026-01-10 12:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:23:20] HOME_URL="https://www.centos.org/"
[2026-01-10 12:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:23:20] 
[2026-01-10 12:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:23:20] 
[2026-01-10 12:23:20] 2026-01-10 17:22:46,452 | INFO     | ***************************************
[2026-01-10 12:23:20] 2026-01-10 17:22:46,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 12:23:20] 2026-01-10 17:22:47,016 | INFO     | sufficient remaining disk space (74389127168 B)
[2026-01-10 12:23:20] 2026-01-10 17:22:47,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:23:20] 2026-01-10 17:22:47,016 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:23:20] 2026-01-10 17:22:47,016 | INFO     | update_server=False
[2026-01-10 12:23:20] 2026-01-10 17:22:47,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:23:20] 2026-01-10 17:22:47,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 12:23:20] 2026-01-10 17:22:47,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 12:23:20] 2026-01-10 17:22:47,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:23:20] 2026-01-10 17:22:47,024 | INFO     | will abort loop
[2026-01-10 12:23:20] 2026-01-10 17:22:47,598 | INFO     | all payload control threads have been joined
[2026-01-10 12:23:20] 2026-01-10 17:22:47,606 | INFO     | all job control threads have been joined
[2026-01-10 12:23:20] 2026-01-10 17:22:47,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:23:20] 2026-01-10 17:22:47,887 | INFO     | all data control threads have been joined
[2026-01-10 12:23:20] 2026-01-10 17:22:48,022 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,029 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,158 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,159 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:23:20] 2026-01-10 17:22:48,362 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,606 | INFO     | [payload] control thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,612 | INFO     | [job] control thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,854 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,855 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,893 | INFO     | [data] control thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:48,997 | INFO     | [job] validate thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:49,214 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:49,355 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:49,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:23:20] 2026-01-10 17:22:49,834 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:22:53,655 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:23:20] 2026-01-10 17:23:00,922 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:23:20] 2026-01-10 17:23:02,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802827175744)>', '<ExcThread(monitor, started 139802099828480)>']
[2026-01-10 12:23:20] 2026-01-10 17:23:07,568 | INFO     | all workflow threads have been joined
[2026-01-10 12:23:20] 2026-01-10 17:23:07,569 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:23:20] 2026-01-10 17:23:07,569 | INFO     | traces error code: 0
[2026-01-10 12:23:20] 2026-01-10 17:23:07,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:23:20] 2026-01-10 17:23:19,110 | INFO     | PID=1391055 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | INFO     | .. there are 22 such processes running
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:23:20] 2026-01-10 17:23:19,111 | INFO     | [monitor] control thread has ended
[2026-01-10 12:23:20] 2026-01-10 17:23:19,528 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:23:20] 2026-01-10 17:23:19,543 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:23:20] 2026-01-10 17:23:19,555 [wrapper] pilotpid: 1391055
[2026-01-10 12:23:20] 2026-01-10 17:23:19,577 [wrapper] Pilot exit status: 0
[2026-01-10 12:23:20] 2026-01-10 17:23:19,653 [wrapper] pandaids: 6962931319
[2026-01-10 12:23:20] 2026-01-10 17:23:19,901 [wrapper] cleanup supervisor_pilot 3535029 1391056
[2026-01-10 12:23:20] 2026-01-10 17:23:19,918 [wrapper] Test setup, not cleaning
[2026-01-10 12:23:20] 2026-01-10 17:23:19,933 [wrapper] apfmon messages muted
[2026-01-10 12:23:20] 2026-01-10 17:23:19,957 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:23:20] 2026-01-10 17:23:19,979 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:23:20]  *** Error codes and diagnostics ***
[2026-01-10 12:23:20]     "exeErrorCode": 0,
[2026-01-10 12:23:20]     "exeErrorDiag": "",
[2026-01-10 12:23:20]     "pilotErrorCode": 0,
[2026-01-10 12:23:20]     "pilotErrorDiag": "",
[2026-01-10 12:23:20]  *** Listing of results directory ***
[2026-01-10 12:23:20] total 563784
[2026-01-10 12:23:20] -rwx------. 1 boincer umatlas     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas       100 Jan 10 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:23:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 06:46 run_atlas
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas       105 Jan 10 06:46 job.xml
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas 414901083 Jan 10 06:46 EVNT.47961981._000022.pool.root.1
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 06:46 input.tar.gz
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:46 start_atlas.sh
[2026-01-10 12:23:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 06:46 shared
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas         0 Jan 10 06:46 boinc_lockfile
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas      2874 Jan 10 06:46 pandaJob.out
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas        57 Jan 10 06:46 setup.sh.local
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas    989564 Jan 10 06:47 agis_schedconf.cvmfs.json
[2026-01-10 12:23:20] drwx------. 5 boincer umatlas      4096 Jan 10 06:47 pilot3
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas       531 Jan 10 11:40 boinc_task_state.xml
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas 150514512 Jan 10 12:21 HITS.47961985._000451.pool.root.1
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas      1050 Jan 10 12:21 memory_monitor_summary.json
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas   1516240 Jan 10 12:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas   1525248 Jan 10 12:22 log.47961985._000451.job.log.tgz.1
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas      6877 Jan 10 12:22 init_data.xml
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas        95 Jan 10 12:22 pilot_heartbeat.json
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas      8599 Jan 10 12:22 heartbeat.json
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 12:23 boinc_mmap_file
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas        28 Jan 10 12:23 wrapper_checkpoint.txt
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas       823 Jan 10 12:23 pilotlog.txt
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas   2469294 Jan 10 12:23 log.47961985._000451.job.log.1
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas       353 Jan 10 12:23 output.list
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas       620 Jan 10 12:23 runtime_log
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas   4014080 Jan 10 12:23 result.tar.gz
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 12:23 runtime_log.err
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas       659 Jan 10 12:23 q2MNDmhR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG6jKDmVDhtbm.diag
[2026-01-10 12:23:20] -rw-r--r--. 1 boincer umatlas     21736 Jan 10 12:23 stderr.txt
[2026-01-10 12:23:20] HITS file was successfully produced:
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas 150514512 Jan 10 12:21 shared/HITS.pool.root.1
[2026-01-10 12:23:20]  *** Contents of shared directory: ***
[2026-01-10 12:23:20] total 556684
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas 414901083 Jan 10 06:46 ATLAS.root_0
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 06:46 input.tar.gz
[2026-01-10 12:23:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:46 start_atlas.sh
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas 150514512 Jan 10 12:21 HITS.pool.root.1
[2026-01-10 12:23:20] -rw-------. 1 boincer umatlas   4014080 Jan 10 12:23 result.tar.gz
12:23:21 (1381530): run_atlas exited; CPU time 54562.955422
12:23:21 (1381530): called boinc_finish(0)

</stderr_txt>
]]>

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