Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:28:19 (1577628): wrapper (7.7.26015): starting
06:28:19 (1577628): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 06:28:19] Arguments: --nthreads 12
[2026-01-10 06:28:19] Threads: 12
[2026-01-10 06:28:19] Checking for CVMFS
[2026-01-10 06:28:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:28:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:28:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:28:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:28:19] 2.13.3.0 9278 94745 333580 154978 3 37 21170182 32935936 11884 16776704 0 461625588 99.752 311959041 33389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 06:28:19] CVMFS is ok
[2026-01-10 06:28:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:28:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:28:19] Further information can be found at the LHC@home message board.
[2026-01-10 06:28:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:28:19] Checking for apptainer binary...
[2026-01-10 06:28:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:28:19] Running /usr/bin/apptainer --version
[2026-01-10 06:28:19] apptainer version 1.4.5-2.el9
[2026-01-10 06:28:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:28:20] c-4-40.aglt2.org
[2026-01-10 06:28:20] apptainer works
[2026-01-10 06:28:20] Set ATHENA_PROC_NUMBER=12
[2026-01-10 06:28:20] Set ATHENA_CORE_NUMBER=12
[2026-01-10 06:28:20] Starting ATLAS job with PandaID=6963161559
[2026-01-10 06:28:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:44:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:44:46] 2026-01-10 18:44:09,106 | INFO     | total number of processed events: 400 (read)
[2026-01-10 13:44:46] 2026-01-10 18:44:09,107 | INFO     | executing command: lscpu
[2026-01-10 13:44:46] 2026-01-10 18:44:09,148 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 13:44:46] 2026-01-10 18:44:10,334 | INFO     | time since job start (26133s) is within the limit (349056.0s)
[2026-01-10 13:44:46] 2026-01-10 18:44:10,874 | INFO     | monitor loop #1541: job 0:6963161559 is in state 'finished'
[2026-01-10 13:44:46] 2026-01-10 18:44:10,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:44:46] 2026-01-10 18:44:12,341 | INFO     | time since job start (26135s) is within the limit (349056.0s)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,255 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 13:44:46] 2026-01-10 18:44:13,262 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8936499999995
[2026-01-10 13:44:46] 2026-01-10 18:44:13,268 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161559/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,269 | INFO     | extracted standard info from prmon json
[2026-01-10 13:44:46] 2026-01-10 18:44:13,269 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:44:46] 2026-01-10 18:44:13,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:44:46] 2026-01-10 18:44:13,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:44:46] 2026-01-10 18:44:13,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:44:46] 2026-01-10 18:44:13,278 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:44:46] 2026-01-10 18:44:13,279 | INFO     | sum of square deviations: 24310705523.240356
[2026-01-10 13:44:46] 2026-01-10 18:44:13,284 | INFO     | sum of deviations: -20101823870.516365
[2026-01-10 13:44:46] 2026-01-10 18:44:13,284 | INFO     | mean x: 1768057575.754673
[2026-01-10 13:44:46] 2026-01-10 18:44:13,284 | INFO     | mean y: 2746850.63317757
[2026-01-10 13:44:46] 2026-01-10 18:44:13,284 | INFO     | intersect: 1464702857.9064426
[2026-01-10 13:44:46] 2026-01-10 18:44:13,285 | INFO     | chi2: 1.8219439392766952
[2026-01-10 13:44:46] 2026-01-10 18:44:13,286 | INFO     | sum of square deviations: 23468751185.276505
[2026-01-10 13:44:46] 2026-01-10 18:44:13,290 | INFO     | sum of deviations: -20608104427.723392
[2026-01-10 13:44:46] 2026-01-10 18:44:13,290 | INFO     | mean x: 1768057423.2695036
[2026-01-10 13:44:46] 2026-01-10 18:44:13,290 | INFO     | mean y: 2746758.936170213
[2026-01-10 13:44:46] 2026-01-10 18:44:13,290 | INFO     | intersect: 1555292598.5208673
[2026-01-10 13:44:46] 2026-01-10 18:44:13,291 | INFO     | chi2: 1.8211508873302442
[2026-01-10 13:44:46] 2026-01-10 18:44:13,291 | INFO     | current chi2=1.8211508873302442 (change=0.04352779080380491 %)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,291 | INFO     | right removable region: 422
[2026-01-10 13:44:46] 2026-01-10 18:44:13,292 | INFO     | sum of square deviations: 23468423615.27651
[2026-01-10 13:44:46] 2026-01-10 18:44:13,296 | INFO     | sum of deviations: -90653622368.97873
[2026-01-10 13:44:46] 2026-01-10 18:44:13,296 | INFO     | mean x: 1768057728.2695036
[2026-01-10 13:44:46] 2026-01-10 18:44:13,296 | INFO     | mean y: 2759556.4822695036
[2026-01-10 13:44:46] 2026-01-10 18:44:13,296 | INFO     | intersect: 6832397552.311054
[2026-01-10 13:44:46] 2026-01-10 18:44:13,297 | INFO     | chi2: 0.3994632143722495
[2026-01-10 13:44:46] 2026-01-10 18:44:13,297 | INFO     | current chi2=0.3994632143722495 (change=78.0748899150632 %)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,298 | INFO     | sum of square deviations: 22645842299.18885
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | sum of deviations: -84003051104.82777
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | mean x: 1768057880.7822967
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | mean y: 2758308.3205741625
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | intersect: 6561236220.2226925
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | chi2: 0.3701688003481109
[2026-01-10 13:44:46] 2026-01-10 18:44:13,301 | INFO     | current chi2=0.3701688003481109 (change=7.333444725360848 %)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,302 | INFO     | left removable region: 20
[2026-01-10 13:44:46] 2026-01-10 18:44:13,302 | INFO     | sum of square deviations: 20143449767.156857
[2026-01-10 13:44:46] 2026-01-10 18:44:13,304 | INFO     | sum of deviations: -41609949481.2164
[2026-01-10 13:44:46] 2026-01-10 18:44:13,304 | INFO     | mean x: 1768058002.8283582
[2026-01-10 13:44:46] 2026-01-10 18:44:13,304 | INFO     | mean y: 2750025.1417910447
[2026-01-10 13:44:46] 2026-01-10 18:44:13,305 | INFO     | intersect: 3654994552.665549
[2026-01-10 13:44:46] 2026-01-10 18:44:13,305 | INFO     | chi2: 0.2561779003849586
[2026-01-10 13:44:46] 2026-01-10 18:44:13,305 | INFO     | current memory leak: -2.07 B/s (using 402 data points, chi2=0.26)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,305 | INFO     | could have reported an average CPU frequency of 2599 MHz (18 samples)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | ..............................
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . Timing measurements:
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . get job = 0 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . initial setup = 3 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . payload setup = 8 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . stage-in = 0 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . payload execution = 26095 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . stage-out = 2 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | . log creation = 0 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,306 | INFO     | ..............................
[2026-01-10 13:44:46] 2026-01-10 18:44:13,828 | INFO     | 
[2026-01-10 13:44:46] 2026-01-10 18:44:13,828 | INFO     | job summary report
[2026-01-10 13:44:46] 2026-01-10 18:44:13,828 | INFO     | --------------------------------------------------
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | PanDA job id: 6963161559
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | task id: 47898826
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | errors: (none)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | pilot state: finished 
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | transexitcode: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | exeerrorcode: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | exeerrordiag: 
[2026-01-10 13:44:46] 2026-01-10 18:44:13,829 | INFO     | exitcode: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | exitmsg: OK
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | cpuconsumptiontime: 66817 s
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | nevents: 400
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | neventsw: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | pid: 1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | pgrp: 1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | corecount: 12
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | event service: False
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | sizes: {0: 2283970, 7: 2284232, 11: 2284260, 26107: 2320411, 26110: 2329409, 26112: 2329465, 26118: 2329787}
[2026-01-10 13:44:46] 2026-01-10 18:44:13,830 | INFO     | --------------------------------------------------
[2026-01-10 13:44:46] 2026-01-10 18:44:13,831 | INFO     | 
[2026-01-10 13:44:46] 2026-01-10 18:44:13,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 13:44:46] 2026-01-10 18:44:13,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,853 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:44:46] 2026-01-10 18:44:13,853 | INFO     | job 6963161559 has completed (purged errors)
[2026-01-10 13:44:46] 2026-01-10 18:44:13,853 | INFO     | overall cleanup function is called
[2026-01-10 13:44:46] 2026-01-10 18:44:14,862 | INFO     | --- collectZombieJob: --- 10, [1592245]
[2026-01-10 13:44:46] 2026-01-10 18:44:14,862 | INFO     | zombie collector waiting for pid 1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:14,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:44:46] 2026-01-10 18:44:14,863 | INFO     | collected zombie processes
[2026-01-10 13:44:46] 2026-01-10 18:44:14,863 | INFO     | will attempt to kill all subprocesses of pid=1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:15,194 | INFO     | process IDs to be killed: [1592245] (in reverse order)
[2026-01-10 13:44:46] 2026-01-10 18:44:15,291 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:44:46] 2026-01-10 18:44:15,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:44:46] 2026-01-10 18:44:15,303 | INFO     | did not find any defunct processes belonging to 1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:15,315 | INFO     | did not find any defunct processes belonging to 1592245
[2026-01-10 13:44:46] 2026-01-10 18:44:15,315 | INFO     | ready for new job
[2026-01-10 13:44:46] 2026-01-10 18:44:15,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:44:46] 2026-01-10 18:44:15,319 | INFO     | ***************************************
[2026-01-10 13:44:46] 2026-01-10 18:44:15,319 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:44:46] 2026-01-10 18:44:15,319 | INFO     | ***************************************
[2026-01-10 13:44:46] 2026-01-10 18:44:15,319 | INFO     | 
[2026-01-10 13:44:46] 2026-01-10 18:44:15,321 | INFO     | architecture information:
[2026-01-10 13:44:46] 2026-01-10 18:44:15,322 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:44:46] 2026-01-10 18:44:15,336 | INFO     | cat /etc/os-release:
[2026-01-10 13:44:46] NAME="CentOS Linux"
[2026-01-10 13:44:46] VERSION="7 (Core)"
[2026-01-10 13:44:46] ID="centos"
[2026-01-10 13:44:46] ID_LIKE="rhel fedora"
[2026-01-10 13:44:46] VERSION_ID="7"
[2026-01-10 13:44:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:44:46] ANSI_COLOR="0;31"
[2026-01-10 13:44:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:44:46] HOME_URL="https://www.centos.org/"
[2026-01-10 13:44:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:44:46] 
[2026-01-10 13:44:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:44:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:44:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:44:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:44:46] 
[2026-01-10 13:44:46] 2026-01-10 18:44:15,336 | INFO     | ***************************************
[2026-01-10 13:44:46] 2026-01-10 18:44:15,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 13:44:46] 2026-01-10 18:44:15,857 | INFO     | sufficient remaining disk space (76484182016 B)
[2026-01-10 13:44:46] 2026-01-10 18:44:15,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:44:46] 2026-01-10 18:44:15,857 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:44:46] 2026-01-10 18:44:15,857 | INFO     | update_server=False
[2026-01-10 13:44:46] 2026-01-10 18:44:15,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:44:46] 2026-01-10 18:44:15,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:44:46] 2026-01-10 18:44:15,884 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 13:44:46] 2026-01-10 18:44:15,885 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 13:44:46] 2026-01-10 18:44:15,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:44:46] 2026-01-10 18:44:15,886 | INFO     | will abort loop
[2026-01-10 13:44:46] 2026-01-10 18:44:16,414 | INFO     | all payload control threads have been joined
[2026-01-10 13:44:46] 2026-01-10 18:44:16,715 | INFO     | all data control threads have been joined
[2026-01-10 13:44:46] 2026-01-10 18:44:16,862 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:16,891 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:16,903 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:16,904 | INFO     | [job] validate thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:16,940 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:16,973 | INFO     | all job control threads have been joined
[2026-01-10 13:44:46] 2026-01-10 18:44:17,337 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,419 | INFO     | [payload] control thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,620 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,686 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,720 | INFO     | [data] control thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,864 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,879 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,956 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:17,978 | INFO     | [job] control thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:18,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:44:46] 2026-01-10 18:44:18,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:44:46] 2026-01-10 18:44:19,410 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:22,130 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:44:46] 2026-01-10 18:44:23,454 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:44:46] 2026-01-10 18:44:23,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451858872128)>', '<ExcThread(monitor, started 140450958649088)>']
[2026-01-10 13:44:46] 2026-01-10 18:44:28,956 | INFO     | all workflow threads have been joined
[2026-01-10 13:44:46] 2026-01-10 18:44:28,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:44:46] 2026-01-10 18:44:28,957 | INFO     | traces error code: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:28,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:44:46] 2026-01-10 18:44:45,748 | INFO     | PID=1582296 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:44:46] 2026-01-10 18:44:45,748 | INFO     | .. there are 16 such processes running
[2026-01-10 13:44:46] 2026-01-10 18:44:45,749 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:44:46] 2026-01-10 18:44:45,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:44:46] 2026-01-10 18:44:45,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:44:46] 2026-01-10 18:44:45,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:44:46] 2026-01-10 18:44:45,749 | INFO     | [monitor] control thread has ended
[2026-01-10 13:44:46] 2026-01-10 18:44:45,957 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:44:46] 2026-01-10 18:44:45,960 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:44:46] 2026-01-10 18:44:45,962 [wrapper] pilotpid: 1582296
[2026-01-10 13:44:46] 2026-01-10 18:44:45,965 [wrapper] Pilot exit status: 0
[2026-01-10 13:44:46] 2026-01-10 18:44:45,975 [wrapper] pandaids: 6963161559
[2026-01-10 13:44:46] 2026-01-10 18:44:46,042 [wrapper] cleanup supervisor_pilot 3305135 1582297
[2026-01-10 13:44:46] 2026-01-10 18:44:46,045 [wrapper] Test setup, not cleaning
[2026-01-10 13:44:46] 2026-01-10 18:44:46,047 [wrapper] apfmon messages muted
[2026-01-10 13:44:46] 2026-01-10 18:44:46,049 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:44:46] 2026-01-10 18:44:46,050 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:44:46]  *** Error codes and diagnostics ***
[2026-01-10 13:44:46]     "exeErrorCode": 0,
[2026-01-10 13:44:46]     "exeErrorDiag": "",
[2026-01-10 13:44:46]     "pilotErrorCode": 0,
[2026-01-10 13:44:46]     "pilotErrorDiag": "",
[2026-01-10 13:44:46]  *** Listing of results directory ***
[2026-01-10 13:44:46] total 437176
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 13:44:46] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas       100 Jan 10 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:44:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 06:28 run_atlas
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas       105 Jan 10 06:28 job.xml
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas 223832693 Jan 10 06:28 EVNT.47898824._001284.pool.root.1
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:28 start_atlas.sh
[2026-01-10 13:44:46] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 06:28 shared
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 06:28 input.tar.gz
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas         0 Jan 10 06:28 boinc_lockfile
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 06:28 pandaJob.out
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas        57 Jan 10 06:28 setup.sh.local
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas    989564 Jan 10 06:28 agis_schedconf.cvmfs.json
[2026-01-10 13:44:46] drwx------. 5 boincer umatlas      4096 Jan 10 06:28 pilot3
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas      6658 Jan 10 13:40 init_data.xml
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas 212097679 Jan 10 13:43 HITS.47898826._033221.pool.root.1
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:43 boinc_task_state.xml
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas        95 Jan 10 13:43 pilot_heartbeat.json
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas      1043 Jan 10 13:43 memory_monitor_summary.json
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:44 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas    673668 Jan 10 13:44 log.47898826._033221.job.log.tgz.1
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas      7824 Jan 10 13:44 heartbeat.json
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:44 boinc_mmap_file
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:44 wrapper_checkpoint.txt
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas       823 Jan 10 13:44 pilotlog.txt
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas   3240148 Jan 10 13:44 log.47898826._033221.job.log.1
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas       357 Jan 10 13:44 output.list
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:44 runtime_log
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas   3932160 Jan 10 13:44 result.tar.gz
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas      9335 Jan 10 13:44 runtime_log.err
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas       655 Jan 10 13:44 2aGLDmG1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxIgKDmJV0Yom.diag
[2026-01-10 13:44:46] -rw-r--r--. 1 boincer umatlas     21413 Jan 10 13:44 stderr.txt
[2026-01-10 13:44:46] HITS file was successfully produced:
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas 212097679 Jan 10 13:43 shared/HITS.pool.root.1
[2026-01-10 13:44:46]  *** Contents of shared directory: ***
[2026-01-10 13:44:46] total 430156
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas 223832693 Jan 10 06:28 ATLAS.root_0
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 06:28 start_atlas.sh
[2026-01-10 13:44:46] -rw-r--r--. 2 boincer umatlas    592397 Jan 10 06:28 input.tar.gz
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas 212097679 Jan 10 13:43 HITS.pool.root.1
[2026-01-10 13:44:46] -rw-------. 1 boincer umatlas   3932160 Jan 10 13:44 result.tar.gz
13:45:08 (1577628): run_atlas exited; CPU time 67725.189012
13:45:08 (1577628): called boinc_finish(0)

</stderr_txt>
]]>

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