Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:58 (696013): wrapper (7.7.26015): starting
04:18:58 (696013): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 04:18:58] Arguments: --nthreads 11
[2026-01-10 04:18:58] Threads: 11
[2026-01-10 04:18:58] Checking for CVMFS
[2026-01-10 04:18:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:18:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:18:59] 2.13.3.0 290515 97418 563296 154974 0 13 26699534 40960001 11004 16776704 0 303261591 99.612 312946497 39330 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 04:18:59] CVMFS is ok
[2026-01-10 04:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:18:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:18:59] Further information can be found at the LHC@home message board.
[2026-01-10 04:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:18:59] Checking for apptainer binary...
[2026-01-10 04:18:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:18:59] Running /usr/bin/apptainer --version
[2026-01-10 04:18:59] apptainer version 1.4.5-2.el9
[2026-01-10 04:18:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:18:59] c6-5-37-4.aglt2.org
[2026-01-10 04:18:59] apptainer works
[2026-01-10 04:18:59] Set ATHENA_PROC_NUMBER=11
[2026-01-10 04:18:59] Set ATHENA_CORE_NUMBER=11
[2026-01-10 04:18:59] Starting ATLAS job with PandaID=6963378785
[2026-01-10 04:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:04:23]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:04:24] 2026-01-11 02:03:35,790 | INFO     | monitor loop #3667: job 0:6963378785 is in state 'finished'
[2026-01-10 21:04:24] 2026-01-11 02:03:35,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:04:24] 2026-01-11 02:03:36,794 | INFO     | time since job start (60266s) is within the limit (349056.0s)
[2026-01-10 21:04:24] 2026-01-11 02:03:38,299 | INFO     | monitor loop #3668: job 0:6963378785 is in state 'finished'
[2026-01-10 21:04:24] 2026-01-11 02:03:38,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:04:24] 2026-01-11 02:03:38,801 | INFO     | time since job start (60268s) is within the limit (349056.0s)
[2026-01-10 21:04:24] 2026-01-11 02:03:40,811 | INFO     | monitor loop #3669: job 0:6963378785 is in state 'finished'
[2026-01-10 21:04:24] 2026-01-11 02:03:40,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:04:24] 2026-01-11 02:03:41,679 | INFO     | PID=700321 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 21:04:24] 2026-01-11 02:03:41,710 | INFO     | .. there are 9 such processes running
[2026-01-10 21:04:24] 2026-01-11 02:03:42,732 | INFO     | time since job start (60272s) is within the limit (349056.0s)
[2026-01-10 21:04:24] 2026-01-11 02:03:43,337 | INFO     | monitor loop #3670: job 0:6963378785 is in state 'finished'
[2026-01-10 21:04:24] 2026-01-11 02:03:43,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:04:24] 2026-01-11 02:03:44,738 | INFO     | time since job start (60274s) is within the limit (349056.0s)
[2026-01-10 21:04:24] 2026-01-11 02:03:45,843 | INFO     | monitor loop #3671: job 0:6963378785 is in state 'finished'
[2026-01-10 21:04:24] 2026-01-11 02:03:45,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:04:24] 2026-01-11 02:03:46,320 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 21:04:24] 2026-01-11 02:03:46,375 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3031.8509285714276
[2026-01-10 21:04:24] 2026-01-11 02:03:46,460 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963378785/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:04:24] 2026-01-11 02:03:46,461 | INFO     | extracted standard info from prmon json
[2026-01-10 21:04:24] 2026-01-11 02:03:46,461 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:04:24] 2026-01-11 02:03:46,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:04:24] 2026-01-11 02:03:46,606 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:04:24] 2026-01-11 02:03:46,640 | INFO     | sum of square deviations: 298189335380.1761
[2026-01-10 21:04:24] 2026-01-11 02:03:46,814 | INFO     | sum of deviations: -478729788778.6802
[2026-01-10 21:04:24] 2026-01-11 02:03:46,815 | INFO     | mean x: 1768066854.644377
[2026-01-10 21:04:24] 2026-01-11 02:03:46,815 | INFO     | mean y: 3384073.787234043
[2026-01-10 21:04:24] 2026-01-11 02:03:46,815 | INFO     | intersect: 2841937205.7808313
[2026-01-10 21:04:24] 2026-01-11 02:03:46,816 | INFO     | chi2: 17.322285444485075
[2026-01-10 21:04:24] 2026-01-11 02:03:46,841 | INFO     | sum of square deviations: 293682847522.5705
[2026-01-10 21:04:24] 2026-01-11 02:03:47,028 | INFO     | sum of deviations: -89093528954.89717
[2026-01-10 21:04:24] 2026-01-11 02:03:47,028 | INFO     | mean x: 1768066702.1731162
[2026-01-10 21:04:24] 2026-01-11 02:03:47,028 | INFO     | mean y: 3397253.852342159
[2026-01-10 21:04:24] 2026-01-11 02:03:47,028 | INFO     | intersect: 539769409.2338167
[2026-01-10 21:04:24] 2026-01-11 02:03:47,030 | INFO     | chi2: 14.014019910037693
[2026-01-10 21:04:24] 2026-01-11 02:03:47,030 | INFO     | current chi2=14.014019910037693 (change=19.09832016710382 %)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,030 | INFO     | right removable region: 981
[2026-01-10 21:04:24] 2026-01-11 02:03:47,066 | INFO     | time since job start (60277s) is within the limit (349056.0s)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,067 | INFO     | sum of square deviations: 293679509185.9154
[2026-01-10 21:04:24] 2026-01-11 02:03:47,193 | INFO     | sum of deviations: -751373957381.4773
[2026-01-10 21:04:24] 2026-01-11 02:03:47,194 | INFO     | mean x: 1768067007.1720977
[2026-01-10 21:04:24] 2026-01-11 02:03:47,194 | INFO     | mean y: 3393279.683299389
[2026-01-10 21:04:24] 2026-01-11 02:03:47,194 | INFO     | intersect: 4526962212.963975
[2026-01-10 21:04:24] 2026-01-11 02:03:47,195 | INFO     | chi2: 15.481304813204577
[2026-01-10 21:04:24] 2026-01-11 02:03:47,195 | INFO     | current chi2=15.481304813204577 (change=10.627816041829597 %)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,195 | INFO     | left removable region: 10
[2026-01-10 21:04:24] 2026-01-11 02:03:47,196 | INFO     | sum of square deviations: 283922584774.8471
[2026-01-10 21:04:24] 2026-01-11 02:03:47,276 | INFO     | sum of deviations: -347714382801.18445
[2026-01-10 21:04:24] 2026-01-11 02:03:47,313 | INFO     | mean x: 1768066976.731205
[2026-01-10 21:04:24] 2026-01-11 02:03:47,313 | INFO     | mean y: 3411146.5242018537
[2026-01-10 21:04:24] 2026-01-11 02:03:47,314 | INFO     | intersect: 2168727857.953743
[2026-01-10 21:04:24] 2026-01-11 02:03:47,315 | INFO     | chi2: 11.514799665853719
[2026-01-10 21:04:24] 2026-01-11 02:03:47,315 | INFO     | current memory leak: -1.22 B/s (using 971 data points, chi2=11.51)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | could have reported an average CPU frequency of 3048 MHz (36 samples)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | ..............................
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . Timing measurements:
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . get job = 0 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . initial setup = 2 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . payload setup = 6 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . stage-in = 0 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,316 | INFO     | . payload execution = 60200 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,317 | INFO     | . stage-out = 10 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,317 | INFO     | . log creation = 4 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,317 | INFO     | ..............................
[2026-01-10 21:04:24] 2026-01-11 02:03:47,756 | INFO     | 
[2026-01-10 21:04:24] 2026-01-11 02:03:47,756 | INFO     | job summary report
[2026-01-10 21:04:24] 2026-01-11 02:03:47,756 | INFO     | --------------------------------------------------
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | PanDA job id: 6963378785
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | task id: 47962010
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | errors: (none)
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | pilot state: finished 
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | transexitcode: 0
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | exeerrorcode: 0
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | exeerrordiag: 
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | exitcode: 0
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | exitmsg: OK
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | cpuconsumptiontime: 240657 s
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | nevents: 900
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | neventsw: 0
[2026-01-10 21:04:24] 2026-01-11 02:03:47,757 | INFO     | pid: 707252
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | pgrp: 707252
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | corecount: 11
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | event service: False
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | sizes: {0: 2284618, 4: 2284880, 11: 2284908, 60210: 2336860, 60221: 2345854, 60222: 2345910, 60262: 2346284}
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | --------------------------------------------------
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | 
[2026-01-10 21:04:24] 2026-01-11 02:03:47,758 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:04:24] 2026-01-11 02:03:48,060 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:04:24] 2026-01-11 02:03:48,062 | INFO     | job 6963378785 has completed (purged errors)
[2026-01-10 21:04:24] 2026-01-11 02:03:48,063 | INFO     | overall cleanup function is called
[2026-01-10 21:04:24] 2026-01-11 02:03:49,142 | INFO     | --- collectZombieJob: --- 10, [707252]
[2026-01-10 21:04:24] 2026-01-11 02:03:49,142 | INFO     | zombie collector waiting for pid 707252
[2026-01-10 21:04:24] 2026-01-11 02:03:49,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:04:24] 2026-01-11 02:03:49,143 | INFO     | collected zombie processes
[2026-01-10 21:04:24] 2026-01-11 02:03:49,143 | INFO     | will attempt to kill all subprocesses of pid=707252
[2026-01-10 21:04:24] 2026-01-11 02:03:49,658 | INFO     | process IDs to be killed: [707252] (in reverse order)
[2026-01-10 21:04:24] 2026-01-11 02:03:50,132 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:04:24] 2026-01-11 02:03:50,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:04:24] 2026-01-11 02:03:50,180 | INFO     | did not find any defunct processes belonging to 707252
[2026-01-10 21:04:24] 2026-01-11 02:03:50,237 | INFO     | did not find any defunct processes belonging to 707252
[2026-01-10 21:04:24] 2026-01-11 02:03:50,238 | INFO     | ready for new job
[2026-01-10 21:04:24] 2026-01-11 02:03:50,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:04:24] 2026-01-11 02:03:50,270 | INFO     | ***************************************
[2026-01-10 21:04:24] 2026-01-11 02:03:50,270 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:04:24] 2026-01-11 02:03:50,270 | INFO     | ***************************************
[2026-01-10 21:04:24] 2026-01-11 02:03:50,270 | INFO     | 
[2026-01-10 21:04:24] 2026-01-11 02:03:50,278 | INFO     | architecture information:
[2026-01-10 21:04:24] 2026-01-11 02:03:50,278 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:04:24] 2026-01-11 02:03:50,393 | INFO     | cat /etc/os-release:
[2026-01-10 21:04:24] NAME="CentOS Linux"
[2026-01-10 21:04:24] VERSION="7 (Core)"
[2026-01-10 21:04:24] ID="centos"
[2026-01-10 21:04:24] ID_LIKE="rhel fedora"
[2026-01-10 21:04:24] VERSION_ID="7"
[2026-01-10 21:04:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:04:24] ANSI_COLOR="0;31"
[2026-01-10 21:04:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:04:24] HOME_URL="https://www.centos.org/"
[2026-01-10 21:04:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:04:24] 
[2026-01-10 21:04:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:04:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:04:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:04:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:04:24] 
[2026-01-10 21:04:24] 2026-01-11 02:03:50,394 | INFO     | ***************************************
[2026-01-10 21:04:24] 2026-01-11 02:03:50,896 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:04:24] 2026-01-11 02:03:51,009 | INFO     | sufficient remaining disk space (73660366848 B)
[2026-01-10 21:04:24] 2026-01-11 02:03:51,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:04:24] 2026-01-11 02:03:51,010 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:04:24] 2026-01-11 02:03:51,010 | INFO     | update_server=False
[2026-01-10 21:04:24] 2026-01-11 02:03:51,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:04:24] 2026-01-11 02:03:51,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:04:24] 2026-01-11 02:03:51,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:04:24] 2026-01-11 02:03:51,064 | INFO     | all payload control threads have been joined
[2026-01-10 21:04:24] 2026-01-11 02:03:51,335 | INFO     | all job control threads have been joined
[2026-01-10 21:04:24] 2026-01-11 02:03:51,517 | INFO     | all data control threads have been joined
[2026-01-10 21:04:24] 2026-01-11 02:03:51,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:04:24] 2026-01-11 02:03:51,982 | INFO     | aborting loop
[2026-01-10 21:04:24] 2026-01-11 02:03:52,020 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,021 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,072 | INFO     | [payload] control thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,240 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,268 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,271 | INFO     | [job] validate thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,352 | INFO     | [job] control thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,522 | INFO     | [data] control thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,656 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,742 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:04:24] 2026-01-11 02:03:52,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:52,988 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:53,010 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:53,028 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:53,765 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:55,035 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:04:24] 2026-01-11 02:03:57,880 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:04:24] 2026-01-11 02:03:59,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258294216512)>', '<ExcThread(monitor, started 140257659975424)>']
[2026-01-10 21:04:24] 2026-01-11 02:04:04,805 | INFO     | all workflow threads have been joined
[2026-01-10 21:04:24] 2026-01-11 02:04:04,805 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:04:24] 2026-01-11 02:04:04,806 | INFO     | traces error code: 0
[2026-01-10 21:04:24] 2026-01-11 02:04:04,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:04:24] 2026-01-11 02:04:19,355 [wrapper] supervise_pilot (15 min periods counter: 68)
[2026-01-10 21:04:24] 2026-01-11 02:04:21,676 | INFO     | PID=700321 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 21:04:24] 2026-01-11 02:04:21,680 | INFO     | .. there are 9 such processes running
[2026-01-10 21:04:24] 2026-01-11 02:04:21,681 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:04:24] 2026-01-11 02:04:21,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:04:24] 2026-01-11 02:04:21,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:04:24] 2026-01-11 02:04:21,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:04:24] 2026-01-11 02:04:21,682 | INFO     | [monitor] control thread has ended
[2026-01-10 21:04:24] 2026-01-11 02:04:22,327 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:04:24] 2026-01-11 02:04:22,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:04:24] 2026-01-11 02:04:22,331 [wrapper] pilotpid: 700321
[2026-01-10 21:04:24] 2026-01-11 02:04:22,333 [wrapper] Pilot exit status: 0
[2026-01-10 21:04:24] 2026-01-11 02:04:22,472 [wrapper] pandaids: 6963378785
[2026-01-10 21:04:24] 2026-01-11 02:04:22,654 [wrapper] cleanup supervisor_pilot 2618002 700322
[2026-01-10 21:04:24] 2026-01-11 02:04:22,701 [wrapper] Test setup, not cleaning
[2026-01-10 21:04:24] 2026-01-11 02:04:22,796 [wrapper] apfmon messages muted
[2026-01-10 21:04:24] 2026-01-11 02:04:22,840 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:04:24] 2026-01-11 02:04:22,885 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:04:24]  *** Error codes and diagnostics ***
[2026-01-10 21:04:24]     "exeErrorCode": 0,
[2026-01-10 21:04:24]     "exeErrorDiag": "",
[2026-01-10 21:04:24]     "pilotErrorCode": 0,
[2026-01-10 21:04:24]     "pilotErrorDiag": "",
[2026-01-10 21:04:24]  *** Listing of results directory ***
[2026-01-10 21:04:24] total 1173788
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 21:04:24] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas       100 Jan 10 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:04:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 04:18 run_atlas
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas       105 Jan 10 04:18 job.xml
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas 390748527 Jan 10 04:18 EVNT.47962006._000103.pool.root.1
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:18 start_atlas.sh
[2026-01-10 21:04:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 04:18 shared
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 04:18 input.tar.gz
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas         0 Jan 10 04:18 boinc_lockfile
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 04:18 pandaJob.out
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas        57 Jan 10 04:18 setup.sh.local
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas    989548 Jan 10 04:19 agis_schedconf.cvmfs.json
[2026-01-10 21:04:24] drwx------. 5 boincer umatlas      4096 Jan 10 04:19 pilot3
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas       533 Jan 10 20:23 boinc_task_state.xml
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas 787240157 Jan 10 21:01 HITS.47962010._001266.pool.root.1
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 21:02 init_data.xml
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas      1051 Jan 10 21:02 memory_monitor_summary.json
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas   1516240 Jan 10 21:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas   2422155 Jan 10 21:03 log.47962010._001266.job.log.tgz.1
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas      8615 Jan 10 21:03 heartbeat.json
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas       821 Jan 10 21:04 pilotlog.txt
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas        95 Jan 10 21:04 pilot_heartbeat.json
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:04 boinc_mmap_file
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas   7606040 Jan 10 21:04 log.47962010._001266.job.log.1
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas        29 Jan 10 21:04 wrapper_checkpoint.txt
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas       353 Jan 10 21:04 output.list
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:04 runtime_log
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas  10045440 Jan 10 21:04 result.tar.gz
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas       661 Jan 10 21:04 Vp5KDmIsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSTmKDmb2uhon.diag
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas      9350 Jan 10 21:04 runtime_log.err
[2026-01-10 21:04:24] -rw-r--r--. 1 boincer umatlas     21711 Jan 10 21:04 stderr.txt
[2026-01-10 21:04:24] HITS file was successfully produced:
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas 787240157 Jan 10 21:01 shared/HITS.pool.root.1
[2026-01-10 21:04:24]  *** Contents of shared directory: ***
[2026-01-10 21:04:24] total 1160796
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas 390748527 Jan 10 04:18 ATLAS.root_0
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:18 start_atlas.sh
[2026-01-10 21:04:24] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 04:18 input.tar.gz
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas 787240157 Jan 10 21:01 HITS.pool.root.1
[2026-01-10 21:04:24] -rw-------. 1 boincer umatlas  10045440 Jan 10 21:04 result.tar.gz
21:04:46 (696013): run_atlas exited; CPU time 241181.004787
21:04:46 (696013): called boinc_finish(0)

</stderr_txt>
]]>

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