Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:41 (3532334): wrapper (7.7.26015): starting
04:09:41 (3532334): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:09:41] Arguments: --nthreads 8
[2026-01-10 04:09:41] Threads: 8
[2026-01-10 04:09:41] Checking for CVMFS
[2026-01-10 04:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:09:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:09:44] 2.13.3.0 3539256 18150 222584 154973 0 454 24553347 40960000 16343 16776704 0 40252017 99.607 49573608 34953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 04:09:44] CVMFS is ok
[2026-01-10 04:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:09:44] Further information can be found at the LHC@home message board.
[2026-01-10 04:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:09:44] Checking for apptainer binary...
[2026-01-10 04:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:09:44] Running /usr/bin/apptainer --version
[2026-01-10 04:09:44] apptainer version 1.4.5-2.el9
[2026-01-10 04:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:09:45] c-210-31-1.aglt2.org
[2026-01-10 04:09:45] apptainer works
[2026-01-10 04:09:45] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:09:45] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:09:46] Starting ATLAS job with PandaID=6963147747
[2026-01-10 04:09:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:25:05]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:25:05] 2026-01-10 15:24:17,903 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2975.701071428571
[2026-01-10 10:25:05] 2026-01-10 15:24:17,985 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963147747/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:25:05] 2026-01-10 15:24:17,986 | INFO     | extracted standard info from prmon json
[2026-01-10 10:25:05] 2026-01-10 15:24:17,986 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:25:05] 2026-01-10 15:24:17,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:25:05] 2026-01-10 15:24:18,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:25:05] 2026-01-10 15:24:18,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:25:05] 2026-01-10 15:24:18,060 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:25:05] 2026-01-10 15:24:18,099 | INFO     | sum of square deviations: 14832048968.898026
[2026-01-10 10:25:05] 2026-01-10 15:24:18,102 | INFO     | sum of deviations: -48033900358.2424
[2026-01-10 10:25:05] 2026-01-10 15:24:18,102 | INFO     | mean x: 1768047512.7217631
[2026-01-10 10:25:05] 2026-01-10 15:24:18,102 | INFO     | mean y: 2546981.878787879
[2026-01-10 10:25:05] 2026-01-10 15:24:18,102 | INFO     | intersect: 5728405778.111258
[2026-01-10 10:25:05] 2026-01-10 15:24:18,138 | INFO     | chi2: 4.912001943369268
[2026-01-10 10:25:05] 2026-01-10 15:24:18,138 | INFO     | sum of square deviations: 14227555161.567003
[2026-01-10 10:25:05] 2026-01-10 15:24:18,141 | INFO     | sum of deviations: 1085478983.4888222
[2026-01-10 10:25:05] 2026-01-10 15:24:18,141 | INFO     | mean x: 1768047360.2206705
[2026-01-10 10:25:05] 2026-01-10 15:24:18,177 | INFO     | mean y: 2559274.879888268
[2026-01-10 10:25:05] 2026-01-10 15:24:18,178 | INFO     | intersect: -132332365.28867131
[2026-01-10 10:25:05] 2026-01-10 15:24:18,178 | INFO     | chi2: 3.447065492720649
[2026-01-10 10:25:05] 2026-01-10 15:24:18,178 | INFO     | current chi2=3.447065492720649 (change=29.823613010294974 %)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,179 | INFO     | sum of square deviations: 13639733814.79316
[2026-01-10 10:25:05] 2026-01-10 15:24:18,221 | INFO     | sum of deviations: 1903223580.4589126
[2026-01-10 10:25:05] 2026-01-10 15:24:18,221 | INFO     | mean x: 1768047207.7223797
[2026-01-10 10:25:05] 2026-01-10 15:24:18,221 | INFO     | mean y: 2559486.7393767703
[2026-01-10 10:25:05] 2026-01-10 15:24:18,222 | INFO     | intersect: -244145411.0829125
[2026-01-10 10:25:05] 2026-01-10 15:24:18,222 | INFO     | chi2: 3.4479416127378597
[2026-01-10 10:25:05] 2026-01-10 15:24:18,222 | INFO     | current chi2=3.4479416127378597 (change=-0.025416401836891762 %)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,222 | INFO     | right removable region: 352
[2026-01-10 10:25:05] 2026-01-10 15:24:18,223 | INFO     | sum of square deviations: 14227505325.217934
[2026-01-10 10:25:05] 2026-01-10 15:24:18,259 | INFO     | sum of deviations: -145403816676.6368
[2026-01-10 10:25:05] 2026-01-10 15:24:18,259 | INFO     | mean x: 1768047665.2290504
[2026-01-10 10:25:05] 2026-01-10 15:24:18,259 | INFO     | mean y: 2571490.215083799
[2026-01-10 10:25:05] 2026-01-10 15:24:18,259 | INFO     | intersect: 18071858600.925243
[2026-01-10 10:25:05] 2026-01-10 15:24:18,260 | INFO     | chi2: 2.1854239986166273
[2026-01-10 10:25:05] 2026-01-10 15:24:18,260 | INFO     | current chi2=2.1854239986166273 (change=55.508486686029514 %)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,260 | INFO     | sum of square deviations: 13639613522.498573
[2026-01-10 10:25:05] 2026-01-10 15:24:18,300 | INFO     | sum of deviations: -162587056411.93494
[2026-01-10 10:25:05] 2026-01-10 15:24:18,301 | INFO     | mean x: 1768047817.736544
[2026-01-10 10:25:05] 2026-01-10 15:24:18,301 | INFO     | mean y: 2575937.1189801698
[2026-01-10 10:25:05] 2026-01-10 15:24:18,301 | INFO     | intersect: 21078077072.628517
[2026-01-10 10:25:05] 2026-01-10 15:24:18,308 | INFO     | chi2: 2.0545295596117175
[2026-01-10 10:25:05] 2026-01-10 15:24:18,308 | INFO     | current chi2=2.0545295596117175 (change=5.98942992699659 %)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,308 | INFO     | left removable region: 20
[2026-01-10 10:25:05] 2026-01-10 15:24:18,309 | INFO     | sum of square deviations: 11347290486.057177
[2026-01-10 10:25:05] 2026-01-10 15:24:18,368 | INFO     | sum of deviations: -109731969647.92458
[2026-01-10 10:25:05] 2026-01-10 15:24:18,369 | INFO     | mean x: 1768047787.2259035
[2026-01-10 10:25:05] 2026-01-10 15:24:18,369 | INFO     | mean y: 2589524.6656626505
[2026-01-10 10:25:05] 2026-01-10 15:24:18,369 | INFO     | intersect: 17100183559.324577
[2026-01-10 10:25:05] 2026-01-10 15:24:18,370 | INFO     | chi2: 0.5171893359096695
[2026-01-10 10:25:05] 2026-01-10 15:24:18,370 | INFO     | current memory leak: -9.67 B/s (using 332 data points, chi2=0.52)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,371 | INFO     | could have reported an average CPU frequency of 2950 MHz (16 samples)
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | ..............................
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . Timing measurements:
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . get job = 1 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . initial setup = 5 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . payload setup = 54 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . stage-in = 1 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . payload execution = 22168 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . stage-out = 7 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | . log creation = 0 s
[2026-01-10 10:25:05] 2026-01-10 15:24:18,372 | INFO     | ..............................
[2026-01-10 10:25:05] 2026-01-10 15:24:18,854 | INFO     | time since job start (22382s) is within the limit (349056.0s)
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | 
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | job summary report
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | --------------------------------------------------
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | PanDA job id: 6963147747
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | task id: 47898826
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | errors: (none)
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | pilot state: finished 
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | transexitcode: 0
[2026-01-10 10:25:05] 2026-01-10 15:24:19,384 | INFO     | exeerrorcode: 0
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | exeerrordiag: 
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | exitcode: 0
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | exitmsg: OK
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | cpuconsumptiontime: 57028 s
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | nevents: 400
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | neventsw: 0
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | pid: 3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | pgrp: 3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | corecount: 8
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | event service: False
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 3: 2283884, 4: 2284055, 5: 2284083, 17: 2284267, 28: 2284295, 39: 2284323, 50: 2284351, 56: 2284641, 62: 2284949, 22226
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | --------------------------------------------------
[2026-01-10 10:25:05] 2026-01-10 15:24:19,385 | INFO     | 
[2026-01-10 10:25:05] 2026-01-10 15:24:19,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 10:25:05] 2026-01-10 15:24:19,660 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,661 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:25:05] 2026-01-10 15:24:19,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,662 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:25:05] 2026-01-10 15:24:19,662 | INFO     | job 6963147747 has completed (purged errors)
[2026-01-10 10:25:05] 2026-01-10 15:24:19,662 | INFO     | overall cleanup function is called
[2026-01-10 10:25:05] 2026-01-10 15:24:20,737 | INFO     | --- collectZombieJob: --- 10, [3550953]
[2026-01-10 10:25:05] 2026-01-10 15:24:20,758 | INFO     | zombie collector waiting for pid 3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:20,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:25:05] 2026-01-10 15:24:20,758 | INFO     | collected zombie processes
[2026-01-10 10:25:05] 2026-01-10 15:24:20,758 | INFO     | will attempt to kill all subprocesses of pid=3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:25,193 | INFO     | PID=3538318 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:25:05] 2026-01-10 15:24:25,193 | INFO     | .. there are 14 such processes running
[2026-01-10 10:25:05] 2026-01-10 15:24:25,317 | INFO     | process IDs to be killed: [3550953] (in reverse order)
[2026-01-10 10:25:05] 2026-01-10 15:24:26,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:25:05] 2026-01-10 15:24:26,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:25:05] 2026-01-10 15:24:26,658 | INFO     | did not find any defunct processes belonging to 3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:26,732 | INFO     | did not find any defunct processes belonging to 3550953
[2026-01-10 10:25:05] 2026-01-10 15:24:26,732 | INFO     | ready for new job
[2026-01-10 10:25:05] 2026-01-10 15:24:26,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:25:05] 2026-01-10 15:24:26,776 | INFO     | ***************************************
[2026-01-10 10:25:05] 2026-01-10 15:24:26,777 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:25:05] 2026-01-10 15:24:26,777 | INFO     | ***************************************
[2026-01-10 10:25:05] 2026-01-10 15:24:26,777 | INFO     | 
[2026-01-10 10:25:05] 2026-01-10 15:24:26,816 | INFO     | architecture information:
[2026-01-10 10:25:05] 2026-01-10 15:24:26,829 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:25:05] 2026-01-10 15:24:27,108 | INFO     | cat /etc/os-release:
[2026-01-10 10:25:05] NAME="CentOS Linux"
[2026-01-10 10:25:05] VERSION="7 (Core)"
[2026-01-10 10:25:05] ID="centos"
[2026-01-10 10:25:05] ID_LIKE="rhel fedora"
[2026-01-10 10:25:05] VERSION_ID="7"
[2026-01-10 10:25:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:25:05] ANSI_COLOR="0;31"
[2026-01-10 10:25:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:25:05] HOME_URL="https://www.centos.org/"
[2026-01-10 10:25:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:25:05] 
[2026-01-10 10:25:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:25:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:25:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:25:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:25:05] 
[2026-01-10 10:25:05] 2026-01-10 15:24:27,108 | INFO     | ***************************************
[2026-01-10 10:25:05] 2026-01-10 15:24:27,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 10:25:05] 2026-01-10 15:24:27,827 | INFO     | sufficient remaining disk space (74128031744 B)
[2026-01-10 10:25:05] 2026-01-10 15:24:27,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:25:05] 2026-01-10 15:24:27,828 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:25:05] 2026-01-10 15:24:27,828 | INFO     | update_server=False
[2026-01-10 10:25:05] 2026-01-10 15:24:27,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:25:05] 2026-01-10 15:24:27,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:25:05] 2026-01-10 15:24:28,114 | INFO     | all data control threads have been joined
[2026-01-10 10:25:05] 2026-01-10 15:24:28,672 | INFO     | all payload control threads have been joined
[2026-01-10 10:25:05] 2026-01-10 15:24:28,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:25:05] 2026-01-10 15:24:28,705 | INFO     | aborting loop
[2026-01-10 10:25:05] 2026-01-10 15:24:28,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:25:05] 2026-01-10 15:24:28,834 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:28,889 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:28,894 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:28,978 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,120 | INFO     | [data] control thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,167 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,209 | INFO     | all job control threads have been joined
[2026-01-10 10:25:05] 2026-01-10 15:24:29,213 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,678 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,679 | INFO     | [payload] control thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,711 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,789 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,836 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,860 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:29,877 | INFO     | [job] validate thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:30,216 | INFO     | [job] control thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:31,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:25:05] 2026-01-10 15:24:35,011 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:25:05] 2026-01-10 15:24:54,738 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:25:05] 2026-01-10 15:24:56,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557658076992)>', '<ExcThread(monitor, started 140557275875072)>']
[2026-01-10 10:25:05] 2026-01-10 15:25:01,753 | INFO     | all workflow threads have been joined
[2026-01-10 10:25:05] 2026-01-10 15:25:01,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:25:05] 2026-01-10 15:25:01,753 | INFO     | traces error code: 0
[2026-01-10 10:25:05] 2026-01-10 15:25:01,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:25:05] 2026-01-10 15:25:02,641 | INFO     | PID=3538318 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:25:05] 2026-01-10 15:25:02,641 | INFO     | .. there are 14 such processes running
[2026-01-10 10:25:05] 2026-01-10 15:25:02,642 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:25:05] 2026-01-10 15:25:02,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:25:05] 2026-01-10 15:25:02,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:25:05] 2026-01-10 15:25:02,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:25:05] 2026-01-10 15:25:02,646 | INFO     | [monitor] control thread has ended
[2026-01-10 10:25:05] 2026-01-10 15:25:04,299 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:25:05] 2026-01-10 15:25:04,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:25:05] 2026-01-10 15:25:04,341 [wrapper] pilotpid: 3538318
[2026-01-10 10:25:05] 2026-01-10 15:25:04,377 [wrapper] Pilot exit status: 0
[2026-01-10 10:25:05] 2026-01-10 15:25:04,476 [wrapper] pandaids: 6963147747
[2026-01-10 10:25:05] 2026-01-10 15:25:04,547 [wrapper] cleanup supervisor_pilot  301091 3538319
[2026-01-10 10:25:05] 2026-01-10 15:25:04,551 [wrapper] Test setup, not cleaning
[2026-01-10 10:25:05] 2026-01-10 15:25:04,598 [wrapper] apfmon messages muted
[2026-01-10 10:25:05] 2026-01-10 15:25:04,628 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:25:05] 2026-01-10 15:25:04,668 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:25:05]  *** Error codes and diagnostics ***
[2026-01-10 10:25:05]     "exeErrorCode": 0,
[2026-01-10 10:25:05]     "exeErrorDiag": "",
[2026-01-10 10:25:05]     "pilotErrorCode": 0,
[2026-01-10 10:25:05]     "pilotErrorDiag": "",
[2026-01-10 10:25:05]  *** Listing of results directory ***
[2026-01-10 10:25:05] total 447548
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 10:25:05] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas       100 Jan 10 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:25:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 04:09 run_atlas
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas       105 Jan 10 04:09 job.xml
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas 226637749 Jan 10 04:09 EVNT.47898824._001082.pool.root.1
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 10:25:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 04:09 shared
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 04:09 input.tar.gz
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas         0 Jan 10 04:09 boinc_lockfile
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 04:09 pandaJob.out
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas        57 Jan 10 04:09 setup.sh.local
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas    989548 Jan 10 04:11 agis_schedconf.cvmfs.json
[2026-01-10 10:25:05] drwx------. 5 boincer umatlas      4096 Jan 10 04:11 pilot3
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas 221201200 Jan 10 10:21 HITS.47898826._027865.pool.root.1
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas       531 Jan 10 10:21 boinc_task_state.xml
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas      6843 Jan 10 10:22 init_data.xml
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas      1042 Jan 10 10:23 memory_monitor_summary.json
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas   1516240 Jan 10 10:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas    551255 Jan 10 10:23 log.47898826._027865.job.log.tgz.1
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas      7830 Jan 10 10:24 heartbeat.json
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:24 boinc_mmap_file
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas        28 Jan 10 10:24 wrapper_checkpoint.txt
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas        95 Jan 10 10:25 pilot_heartbeat.json
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas       823 Jan 10 10:25 pilotlog.txt
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas   2716128 Jan 10 10:25 log.47898826._027865.job.log.1
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas       357 Jan 10 10:25 output.list
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:25 runtime_log
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas   3287040 Jan 10 10:25 result.tar.gz
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 10:25 runtime_log.err
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas       660 Jan 10 10:25 ai0MDmDh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg0kKDmWZgVMn.diag
[2026-01-10 10:25:05] -rw-r--r--. 1 boincer umatlas     21344 Jan 10 10:25 stderr.txt
[2026-01-10 10:25:05] HITS file was successfully produced:
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas 221201200 Jan 10 10:21 shared/HITS.pool.root.1
[2026-01-10 10:25:05]  *** Contents of shared directory: ***
[2026-01-10 10:25:05] total 441160
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas 226637749 Jan 10 04:09 ATLAS.root_0
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 10:25:05] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 04:09 input.tar.gz
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas 221201200 Jan 10 10:21 HITS.pool.root.1
[2026-01-10 10:25:05] -rw-------. 1 boincer umatlas   3287040 Jan 10 10:25 result.tar.gz
10:25:07 (3532334): run_atlas exited; CPU time 57593.346732
10:25:07 (3532334): called boinc_finish(0)

</stderr_txt>
]]>

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