Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:45 (2605994): wrapper (7.7.26015): starting
04:09:45 (2605994): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:09:45] Arguments: --nthreads 8
[2026-01-10 04:09:45] Threads: 8
[2026-01-10 04:09:45] Checking for CVMFS
[2026-01-10 04:09:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:09:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:09:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:09:48] 2.13.3.0 5979 55310 251456 154973 2 201 31151664 32935937 9929 16776704 0 86720574 99.466 126946984 41857 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 04:09:48] CVMFS is ok
[2026-01-10 04:09:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:09:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:09:48] Further information can be found at the LHC@home message board.
[2026-01-10 04:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:09:48] Checking for apptainer binary...
[2026-01-10 04:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:09:48] Running /usr/bin/apptainer --version
[2026-01-10 04:09:49] apptainer version 1.4.5-2.el9
[2026-01-10 04:09:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:09:50] c6-1-26-4.aglt2.org
[2026-01-10 04:09:50] apptainer works
[2026-01-10 04:09:50] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:09:50] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:09:50] Starting ATLAS job with PandaID=6963147459
[2026-01-10 04:09:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:51:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:51:04] 2026-01-10 15:49:52,342 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:51:04] 2026-01-10 15:49:52,441 | WARNING  | process 2628035 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 10:51:04] 2026-01-10 15:49:52,441 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963147459/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:51:04] 2026-01-10 15:49:52,633 | INFO     | number of running child processes to parent process 2628035: 1
[2026-01-10 10:51:04] 2026-01-10 15:49:52,633 | INFO     | maximum number of monitored processes: 7
[2026-01-10 10:51:04] 2026-01-10 15:49:53,316 | INFO     | time since job start (23918s) is within the limit (349056.0s)
[2026-01-10 10:51:04] 2026-01-10 15:49:55,135 | INFO     | monitor loop #1538: job 0:6963147459 is in state 'finished'
[2026-01-10 10:51:04] 2026-01-10 15:49:55,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:51:04] 2026-01-10 15:49:55,322 | INFO     | time since job start (23920s) is within the limit (349056.0s)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,181 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:51:04] 2026-01-10 15:49:56,185 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2925.702357142857
[2026-01-10 10:51:04] 2026-01-10 15:49:56,194 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963147459/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,195 | INFO     | extracted standard info from prmon json
[2026-01-10 10:51:04] 2026-01-10 15:49:56,195 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:51:04] 2026-01-10 15:49:56,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:51:04] 2026-01-10 15:49:56,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:51:04] 2026-01-10 15:49:56,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:51:04] 2026-01-10 15:49:56,202 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:51:04] 2026-01-10 15:49:56,202 | INFO     | sum of square deviations: 18392803315.39739
[2026-01-10 10:51:04] 2026-01-10 15:49:56,206 | INFO     | sum of deviations: 97395198034.69238
[2026-01-10 10:51:04] 2026-01-10 15:49:56,206 | INFO     | mean x: 1768048315.9358974
[2026-01-10 10:51:04] 2026-01-10 15:49:56,206 | INFO     | mean y: 2530961.707692308
[2026-01-10 10:51:04] 2026-01-10 15:49:56,206 | INFO     | intersect: -9359794775.844543
[2026-01-10 10:51:04] 2026-01-10 15:49:56,206 | INFO     | chi2: 4.333952882237636
[2026-01-10 10:51:04] 2026-01-10 15:49:56,207 | INFO     | sum of square deviations: 17694432766.935005
[2026-01-10 10:51:04] 2026-01-10 15:49:56,210 | INFO     | sum of deviations: 120275130340.77911
[2026-01-10 10:51:04] 2026-01-10 15:49:56,210 | INFO     | mean x: 1768048163.4415584
[2026-01-10 10:51:04] 2026-01-10 15:49:56,210 | INFO     | mean y: 2535901.1012987015
[2026-01-10 10:51:04] 2026-01-10 15:49:56,210 | INFO     | intersect: -12015494069.550524
[2026-01-10 10:51:04] 2026-01-10 15:49:56,211 | INFO     | chi2: 3.669096400952528
[2026-01-10 10:51:04] 2026-01-10 15:49:56,211 | INFO     | current chi2=3.669096400952528 (change=15.340648579959637 %)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,211 | INFO     | right removable region: 384
[2026-01-10 10:51:04] 2026-01-10 15:49:56,211 | INFO     | sum of square deviations: 17694329066.935
[2026-01-10 10:51:04] 2026-01-10 15:49:56,214 | INFO     | sum of deviations: -14597834106.532488
[2026-01-10 10:51:04] 2026-01-10 15:49:56,215 | INFO     | mean x: 1768048468.4415584
[2026-01-10 10:51:04] 2026-01-10 15:49:56,215 | INFO     | mean y: 2555378.4207792208
[2026-01-10 10:51:04] 2026-01-10 15:49:56,215 | INFO     | intersect: 1461196626.5282693
[2026-01-10 10:51:04] 2026-01-10 15:49:56,215 | INFO     | chi2: 1.330729067048551
[2026-01-10 10:51:04] 2026-01-10 15:49:56,215 | INFO     | current chi2=1.330729067048551 (change=69.29525762722434 %)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,216 | INFO     | sum of square deviations: 17013785493.839436
[2026-01-10 10:51:04] 2026-01-10 15:49:56,219 | INFO     | sum of deviations: -48074033778.57106
[2026-01-10 10:51:04] 2026-01-10 15:49:56,219 | INFO     | mean x: 1768048620.944737
[2026-01-10 10:51:04] 2026-01-10 15:49:56,219 | INFO     | mean y: 2562867.639473684
[2026-01-10 10:51:04] 2026-01-10 15:49:56,219 | INFO     | intersect: 4998348735.295448
[2026-01-10 10:51:04] 2026-01-10 15:49:56,220 | INFO     | chi2: 1.0473615483529939
[2026-01-10 10:51:04] 2026-01-10 15:49:56,220 | INFO     | current chi2=1.0473615483529939 (change=21.294155640865593 %)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,220 | INFO     | left removable region: 20
[2026-01-10 10:51:04] 2026-01-10 15:49:56,220 | INFO     | sum of square deviations: 14953906379.788511
[2026-01-10 10:51:04] 2026-01-10 15:49:56,223 | INFO     | sum of deviations: -50458634111.173065
[2026-01-10 10:51:04] 2026-01-10 15:49:56,223 | INFO     | mean x: 1768048742.9423077
[2026-01-10 10:51:04] 2026-01-10 15:49:56,223 | INFO     | mean y: 2574661.4203296704
[2026-01-10 10:51:04] 2026-01-10 15:49:56,223 | INFO     | intersect: 5968462259.287391
[2026-01-10 10:51:04] 2026-01-10 15:49:56,224 | INFO     | chi2: 0.23778557236273784
[2026-01-10 10:51:04] 2026-01-10 15:49:56,224 | INFO     | current memory leak: -3.37 B/s (using 364 data points, chi2=0.24)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | could have reported an average CPU frequency of 3024 MHz (17 samples)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | ..............................
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . Timing measurements:
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . get job = 0 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . initial setup = 10 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . payload setup = 51 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . stage-in = 0 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . payload execution = 23771 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,225 | INFO     | . stage-out = 2 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,226 | INFO     | . log creation = 0 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,226 | INFO     | ..............................
[2026-01-10 10:51:04] 2026-01-10 15:49:56,313 | INFO     | 
[2026-01-10 10:51:04] 2026-01-10 15:49:56,313 | INFO     | job summary report
[2026-01-10 10:51:04] 2026-01-10 15:49:56,313 | INFO     | --------------------------------------------------
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | PanDA job id: 6963147459
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | task id: 47898826
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | errors: (none)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | pilot state: finished 
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | transexitcode: 0
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | exeerrorcode: 0
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | exeerrordiag: 
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | exitcode: 0
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | exitmsg: OK
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | cpuconsumptiontime: 55099 s
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | nevents: 400
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | neventsw: 0
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | pid: 2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:56,314 | INFO     | pgrp: 2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | corecount: 8
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | event service: False
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | sizes: {0: 2283141, 1: 2283742, 2: 2283854, 3: 2284025, 4: 2284081, 15: 2284081, 27: 2284237, 38: 2284265, 44: 2284555, 49: 2284583, 23826: 2319956, 23829: 2328954
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | --------------------------------------------------
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | 
[2026-01-10 10:51:04] 2026-01-10 15:49:56,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 10:51:04] 2026-01-10 15:49:56,334 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,334 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,336 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,336 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:51:04] 2026-01-10 15:49:56,336 | INFO     | job 6963147459 has completed (purged errors)
[2026-01-10 10:51:04] 2026-01-10 15:49:56,336 | INFO     | overall cleanup function is called
[2026-01-10 10:51:04] 2026-01-10 15:49:57,344 | INFO     | --- collectZombieJob: --- 10, [2628035]
[2026-01-10 10:51:04] 2026-01-10 15:49:57,344 | INFO     | zombie collector waiting for pid 2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:57,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:51:04] 2026-01-10 15:49:57,344 | INFO     | collected zombie processes
[2026-01-10 10:51:04] 2026-01-10 15:49:57,344 | INFO     | will attempt to kill all subprocesses of pid=2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:57,538 | INFO     | process IDs to be killed: [2628035] (in reverse order)
[2026-01-10 10:51:04] 2026-01-10 15:49:57,594 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:51:04] 2026-01-10 15:49:57,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:51:04] 2026-01-10 15:49:57,604 | INFO     | did not find any defunct processes belonging to 2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:57,612 | INFO     | did not find any defunct processes belonging to 2628035
[2026-01-10 10:51:04] 2026-01-10 15:49:57,613 | INFO     | ready for new job
[2026-01-10 10:51:04] 2026-01-10 15:49:57,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:51:04] 2026-01-10 15:49:57,616 | INFO     | ***************************************
[2026-01-10 10:51:04] 2026-01-10 15:49:57,616 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:51:04] 2026-01-10 15:49:57,616 | INFO     | ***************************************
[2026-01-10 10:51:04] 2026-01-10 15:49:57,616 | INFO     | 
[2026-01-10 10:51:04] 2026-01-10 15:49:57,619 | INFO     | architecture information:
[2026-01-10 10:51:04] 2026-01-10 15:49:57,619 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:51:04] 2026-01-10 15:49:57,635 | INFO     | cat /etc/os-release:
[2026-01-10 10:51:04] NAME="CentOS Linux"
[2026-01-10 10:51:04] VERSION="7 (Core)"
[2026-01-10 10:51:04] ID="centos"
[2026-01-10 10:51:04] ID_LIKE="rhel fedora"
[2026-01-10 10:51:04] VERSION_ID="7"
[2026-01-10 10:51:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:51:04] ANSI_COLOR="0;31"
[2026-01-10 10:51:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:51:04] HOME_URL="https://www.centos.org/"
[2026-01-10 10:51:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:51:04] 
[2026-01-10 10:51:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:51:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:51:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:51:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:51:04] 
[2026-01-10 10:51:04] 2026-01-10 15:49:57,635 | INFO     | ***************************************
[2026-01-10 10:51:04] 2026-01-10 15:49:58,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 10:51:04] 2026-01-10 15:49:58,158 | INFO     | sufficient remaining disk space (76438044672 B)
[2026-01-10 10:51:04] 2026-01-10 15:49:58,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:51:04] 2026-01-10 15:49:58,158 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:51:04] 2026-01-10 15:49:58,158 | INFO     | update_server=False
[2026-01-10 10:51:04] 2026-01-10 15:49:58,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:51:04] 2026-01-10 15:49:58,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:51:04] 2026-01-10 15:49:58,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:51:04] 2026-01-10 15:49:58,297 | INFO     | all data control threads have been joined
[2026-01-10 10:51:04] 2026-01-10 15:49:58,491 | INFO     | all payload control threads have been joined
[2026-01-10 10:51:04] 2026-01-10 15:49:58,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:51:04] 2026-01-10 15:49:58,643 | INFO     | aborting loop
[2026-01-10 10:51:04] 2026-01-10 15:49:59,163 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,164 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,263 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,302 | INFO     | [data] control thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,499 | INFO     | [payload] control thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,566 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,648 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,802 | INFO     | all job control threads have been joined
[2026-01-10 10:51:04] 2026-01-10 15:49:59,855 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,893 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:49:59,922 | INFO     | [job] validate thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:00,165 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:00,330 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:00,369 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:00,806 | INFO     | [job] control thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:01,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:51:04] 2026-01-10 15:50:05,207 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:51:04] 2026-01-10 15:50:28,618 | INFO     | PID=2612544 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:51:04] 2026-01-10 15:50:28,618 | INFO     | .. there are 8 such processes running
[2026-01-10 10:51:04] 2026-01-10 15:50:28,618 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:51:04] 2026-01-10 15:50:28,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:51:04] 2026-01-10 15:50:28,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:51:04] 2026-01-10 15:50:56,857 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:51:04] 2026-01-10 15:50:58,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332473296704)>', '<ExcThread(monitor, started 140332108850944)>']
[2026-01-10 10:51:04] 2026-01-10 15:50:59,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:51:04] 2026-01-10 15:50:59,753 | INFO     | [monitor] control thread has ended
[2026-01-10 10:51:04] 2026-01-10 15:51:03,959 | INFO     | all workflow threads have been joined
[2026-01-10 10:51:04] 2026-01-10 15:51:03,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:51:04] 2026-01-10 15:51:03,959 | INFO     | traces error code: 0
[2026-01-10 10:51:04] 2026-01-10 15:51:03,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:51:04] 2026-01-10 15:51:04,140 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:51:04] 2026-01-10 15:51:04,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:51:04] 2026-01-10 15:51:04,145 [wrapper] pilotpid: 2612544
[2026-01-10 10:51:04] 2026-01-10 15:51:04,147 [wrapper] Pilot exit status: 0
[2026-01-10 10:51:04] 2026-01-10 15:51:04,156 [wrapper] pandaids: 6963147459
[2026-01-10 10:51:04] 2026-01-10 15:51:04,208 [wrapper] cleanup supervisor_pilot 3413313 2612545
[2026-01-10 10:51:04] 2026-01-10 15:51:04,210 [wrapper] Test setup, not cleaning
[2026-01-10 10:51:04] 2026-01-10 15:51:04,213 [wrapper] apfmon messages muted
[2026-01-10 10:51:04] 2026-01-10 15:51:04,216 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:51:04] 2026-01-10 15:51:04,218 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:51:04]  *** Error codes and diagnostics ***
[2026-01-10 10:51:04]     "exeErrorCode": 0,
[2026-01-10 10:51:04]     "exeErrorDiag": "",
[2026-01-10 10:51:04]     "pilotErrorCode": 0,
[2026-01-10 10:51:04]     "pilotErrorDiag": "",
[2026-01-10 10:51:04]  *** Listing of results directory ***
[2026-01-10 10:51:04] total 446600
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 10:51:04] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas       100 Jan 10 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:51:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 04:09 run_atlas
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas       105 Jan 10 04:09 job.xml
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas 224891614 Jan 10 04:09 EVNT.47898824._000812.pool.root.1
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 10:51:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 04:09 shared
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas    592403 Jan 10 04:09 input.tar.gz
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas         0 Jan 10 04:09 boinc_lockfile
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 04:09 pandaJob.out
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas        57 Jan 10 04:09 setup.sh.local
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas    989548 Jan 10 04:11 agis_schedconf.cvmfs.json
[2026-01-10 10:51:04] drwx------. 5 boincer umatlas      4096 Jan 10 04:11 pilot3
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas 221131268 Jan 10 10:49 HITS.47898826._027654.pool.root.1
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas      6844 Jan 10 10:49 init_data.xml
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas       531 Jan 10 10:49 boinc_task_state.xml
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas      1037 Jan 10 10:49 memory_monitor_summary.json
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 10:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas    577943 Jan 10 10:49 log.47898826._027654.job.log.tgz.1
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas        95 Jan 10 10:49 pilot_heartbeat.json
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas      7815 Jan 10 10:49 heartbeat.json
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas        28 Jan 10 10:50 wrapper_checkpoint.txt
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:50 boinc_mmap_file
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas      4823 Jan 10 10:51 pilotlog.txt
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas   3106343 Jan 10 10:51 log.47898826._027654.job.log.1
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas       357 Jan 10 10:51 output.list
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:51 runtime_log
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas   3706880 Jan 10 10:51 result.tar.gz
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas       657 Jan 10 10:51 wqqMDm1g7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB0kKDmhkNgAo.diag
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 10:51 runtime_log.err
[2026-01-10 10:51:04] -rw-r--r--. 1 boincer umatlas     21563 Jan 10 10:51 stderr.txt
[2026-01-10 10:51:04] HITS file was successfully produced:
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas 221131268 Jan 10 10:49 shared/HITS.pool.root.1
[2026-01-10 10:51:04]  *** Contents of shared directory: ***
[2026-01-10 10:51:04] total 439800
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas 224891614 Jan 10 04:09 ATLAS.root_0
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 10:51:04] -rw-r--r--. 2 boincer umatlas    592403 Jan 10 04:09 input.tar.gz
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas 221131268 Jan 10 10:49 HITS.pool.root.1
[2026-01-10 10:51:04] -rw-------. 1 boincer umatlas   3706880 Jan 10 10:51 result.tar.gz
10:51:05 (2605994): run_atlas exited; CPU time 55643.894179
10:51:05 (2605994): called boinc_finish(0)

</stderr_txt>
]]>

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