Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:43 (313902): wrapper (7.7.26015): starting
04:09:43 (313902): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 04:09:43] Arguments: --nthreads 9
[2026-01-10 04:09:43] Threads: 9
[2026-01-10 04:09:43] Checking for CVMFS
[2026-01-10 04:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:09:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:09:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:09:45] 2.13.3.0 12448 24123 235512 154973 3 646 24422743 40960001 24405 16776704 0 91829098 99.651 85049152 37846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 04:09:45] CVMFS is ok
[2026-01-10 04:09:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:09:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:09:45] Further information can be found at the LHC@home message board.
[2026-01-10 04:09:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:09:45] Checking for apptainer binary...
[2026-01-10 04:09:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:09:45] Running /usr/bin/apptainer --version
[2026-01-10 04:09:45] apptainer version 1.4.5-2.el9
[2026-01-10 04:09:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:09:45] c-212-19.aglt2.org
[2026-01-10 04:09:45] apptainer works
[2026-01-10 04:09:45] Set ATHENA_PROC_NUMBER=9
[2026-01-10 04:09:45] Set ATHENA_CORE_NUMBER=9
[2026-01-10 04:09:45] Starting ATLAS job with PandaID=6963152537
[2026-01-10 04:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:58:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:58:45] 2026-01-10 12:57:44,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,511 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:58:45] 2026-01-10 12:57:45,537 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3255.7422708333347
[2026-01-10 07:58:45] 2026-01-10 12:57:45,550 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152537/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,551 | INFO     | extracted standard info from prmon json
[2026-01-10 07:58:45] 2026-01-10 12:57:45,551 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:58:45] 2026-01-10 12:57:45,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:58:45] 2026-01-10 12:57:45,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:58:45] 2026-01-10 12:57:45,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:58:45] 2026-01-10 12:57:45,555 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:58:45] 2026-01-10 12:57:45,555 | INFO     | sum of square deviations: 3438755342.4843116
[2026-01-10 07:58:45] 2026-01-10 12:57:45,556 | INFO     | sum of deviations: 27283879444.529167
[2026-01-10 07:58:45] 2026-01-10 12:57:45,556 | INFO     | mean x: 1768043050.1255605
[2026-01-10 07:58:45] 2026-01-10 12:57:45,556 | INFO     | mean y: 2512629.7668161434
[2026-01-10 07:58:45] 2026-01-10 12:57:45,556 | INFO     | intersect: -14025549453.159197
[2026-01-10 07:58:45] 2026-01-10 12:57:45,556 | INFO     | chi2: 3.0330698191062293
[2026-01-10 07:58:45] 2026-01-10 12:57:45,557 | INFO     | sum of square deviations: 3212597445.1559706
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | sum of deviations: 54714769412.06425
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | mean x: 1768042897.6238532
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | mean y: 2530866.256880734
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | intersect: -30109570355.759262
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | chi2: 1.6432291231369105
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | current chi2=1.6432291231369105 (change=45.82290480800309 %)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,558 | INFO     | sum of square deviations: 2996592327.577471
[2026-01-10 07:58:45] 2026-01-10 12:57:45,559 | INFO     | sum of deviations: 53288250913.63379
[2026-01-10 07:58:45] 2026-01-10 12:57:45,559 | INFO     | mean x: 1768042745.1267605
[2026-01-10 07:58:45] 2026-01-10 12:57:45,559 | INFO     | mean y: 2529858.9765258217
[2026-01-10 07:58:45] 2026-01-10 12:57:45,560 | INFO     | intersect: -31438485510.809013
[2026-01-10 07:58:45] 2026-01-10 12:57:45,560 | INFO     | chi2: 1.6430814298284262
[2026-01-10 07:58:45] 2026-01-10 12:57:45,560 | INFO     | current chi2=1.6430814298284262 (change=0.008987992386743528 %)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,560 | INFO     | right removable region: 212
[2026-01-10 07:58:45] 2026-01-10 12:57:45,560 | INFO     | sum of square deviations: 3212593724.903671
[2026-01-10 07:58:45] 2026-01-10 12:57:45,561 | INFO     | sum of deviations: -8787373053.48164
[2026-01-10 07:58:45] 2026-01-10 12:57:45,561 | INFO     | mean x: 1768043202.6284404
[2026-01-10 07:58:45] 2026-01-10 12:57:45,562 | INFO     | mean y: 2536713.142201835
[2026-01-10 07:58:45] 2026-01-10 12:57:45,562 | INFO     | intersect: 4838646264.042353
[2026-01-10 07:58:45] 2026-01-10 12:57:45,562 | INFO     | chi2: 1.5360839943324194
[2026-01-10 07:58:45] 2026-01-10 12:57:45,562 | INFO     | current chi2=1.5360839943324194 (change=49.35546868535109 %)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,562 | INFO     | sum of square deviations: 2996571832.3192587
[2026-01-10 07:58:45] 2026-01-10 12:57:45,563 | INFO     | sum of deviations: -20697022207.366196
[2026-01-10 07:58:45] 2026-01-10 12:57:45,563 | INFO     | mean x: 1768043355.1314554
[2026-01-10 07:58:45] 2026-01-10 12:57:45,563 | INFO     | mean y: 2545141.084507042
[2026-01-10 07:58:45] 2026-01-10 12:57:45,563 | INFO     | intersect: 12214243919.691753
[2026-01-10 07:58:45] 2026-01-10 12:57:45,564 | INFO     | chi2: 1.4297097491929964
[2026-01-10 07:58:45] 2026-01-10 12:57:45,564 | INFO     | current chi2=1.4297097491929964 (change=6.925027897686878 %)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,564 | INFO     | left removable region: 20
[2026-01-10 07:58:45] 2026-01-10 12:57:45,564 | INFO     | sum of square deviations: 2194794052.479172
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | sum of deviations: 3272783923.0312486
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | mean x: 1768043324.6354167
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | mean y: 2567254.671875
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | intersect: -2633864059.4887147
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | chi2: 0.007780020747499373
[2026-01-10 07:58:45] 2026-01-10 12:57:45,573 | INFO     | current memory leak: 1.49 B/s (using 192 data points, chi2=0.01)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | could have reported an average CPU frequency of 3201 MHz (11 samples)
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | ..............................
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . Timing measurements:
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . get job = 0 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . initial setup = 3 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . payload setup = 17 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . stage-in = 0 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . payload execution = 13568 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,574 | INFO     | . stage-out = 6 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,575 | INFO     | . log creation = 1 s
[2026-01-10 07:58:45] 2026-01-10 12:57:45,575 | INFO     | ..............................
[2026-01-10 07:58:45] 2026-01-10 12:57:45,792 | INFO     | time since job start (13652s) is within the limit (349056.0s)
[2026-01-10 07:58:45] 2026-01-10 12:57:46,003 | INFO     | 
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | job summary report
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | --------------------------------------------------
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | PanDA job id: 6963152537
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | task id: 47898826
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | errors: (none)
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | pilot state: finished 
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | transexitcode: 0
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | exeerrorcode: 0
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | exeerrordiag: 
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | exitcode: 0
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | exitmsg: OK
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | cpuconsumptiontime: 45108 s
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | nevents: 400
[2026-01-10 07:58:45] 2026-01-10 12:57:46,004 | INFO     | neventsw: 0
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | pid: 347905
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | pgrp: 347905
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | corecount: 9
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | event service: False
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | sizes: {0: 2283797, 1: 2283996, 12: 2283996, 14: 2284286, 22: 2284314, 13590: 2314460, 13591: 2314587, 13598: 2323641, 13599: 2323697, 13618: 2323891}
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | --------------------------------------------------
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | 
[2026-01-10 07:58:45] 2026-01-10 12:57:46,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:58:45] 2026-01-10 12:57:46,273 | INFO     | job 6963152537 has completed (purged errors)
[2026-01-10 07:58:45] 2026-01-10 12:57:46,273 | INFO     | overall cleanup function is called
[2026-01-10 07:58:45] 2026-01-10 12:57:47,302 | INFO     | --- collectZombieJob: --- 10, [347905]
[2026-01-10 07:58:45] 2026-01-10 12:57:47,303 | INFO     | zombie collector waiting for pid 347905
[2026-01-10 07:58:45] 2026-01-10 12:57:47,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:58:45] 2026-01-10 12:57:47,303 | INFO     | collected zombie processes
[2026-01-10 07:58:45] 2026-01-10 12:57:47,303 | INFO     | will attempt to kill all subprocesses of pid=347905
[2026-01-10 07:58:45] 2026-01-10 12:57:49,232 | INFO     | process IDs to be killed: [347905] (in reverse order)
[2026-01-10 07:58:45] 2026-01-10 12:57:49,839 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:58:45] 2026-01-10 12:57:49,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:58:45] 2026-01-10 12:57:49,936 | INFO     | did not find any defunct processes belonging to 347905
[2026-01-10 07:58:45] 2026-01-10 12:57:50,068 | INFO     | did not find any defunct processes belonging to 347905
[2026-01-10 07:58:45] 2026-01-10 12:57:50,068 | INFO     | ready for new job
[2026-01-10 07:58:45] 2026-01-10 12:57:50,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:58:45] 2026-01-10 12:57:50,107 | INFO     | ***************************************
[2026-01-10 07:58:45] 2026-01-10 12:57:50,108 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:58:45] 2026-01-10 12:57:50,108 | INFO     | ***************************************
[2026-01-10 07:58:45] 2026-01-10 12:57:50,108 | INFO     | 
[2026-01-10 07:58:45] 2026-01-10 12:57:50,151 | INFO     | architecture information:
[2026-01-10 07:58:45] 2026-01-10 12:57:50,181 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:58:45] 2026-01-10 12:57:50,325 | INFO     | cat /etc/os-release:
[2026-01-10 07:58:45] NAME="CentOS Linux"
[2026-01-10 07:58:45] VERSION="7 (Core)"
[2026-01-10 07:58:45] ID="centos"
[2026-01-10 07:58:45] ID_LIKE="rhel fedora"
[2026-01-10 07:58:45] VERSION_ID="7"
[2026-01-10 07:58:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:58:45] ANSI_COLOR="0;31"
[2026-01-10 07:58:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:58:45] HOME_URL="https://www.centos.org/"
[2026-01-10 07:58:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:58:45] 
[2026-01-10 07:58:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:58:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:58:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:58:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:58:45] 
[2026-01-10 07:58:45] 2026-01-10 12:57:50,326 | INFO     | ***************************************
[2026-01-10 07:58:45] 2026-01-10 12:57:50,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 07:58:45] 2026-01-10 12:57:50,958 | INFO     | sufficient remaining disk space (128173735936 B)
[2026-01-10 07:58:45] 2026-01-10 12:57:50,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:58:45] 2026-01-10 12:57:50,959 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:58:45] 2026-01-10 12:57:50,959 | INFO     | update_server=False
[2026-01-10 07:58:45] 2026-01-10 12:57:50,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:58:45] 2026-01-10 12:57:50,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:58:45] 2026-01-10 12:57:50,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:58:45] 2026-01-10 12:57:50,964 | INFO     | aborting loop
[2026-01-10 07:58:45] 2026-01-10 12:57:50,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:58:45] 2026-01-10 12:57:51,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:58:45] 2026-01-10 12:57:51,542 | INFO     | all data control threads have been joined
[2026-01-10 07:58:45] 2026-01-10 12:57:51,814 | INFO     | all payload control threads have been joined
[2026-01-10 07:58:45] 2026-01-10 12:57:51,965 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:51,970 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,052 | INFO     | [job] validate thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,090 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,178 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,548 | INFO     | [data] control thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,581 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,623 | INFO     | all job control threads have been joined
[2026-01-10 07:58:45] 2026-01-10 12:57:52,837 | INFO     | [payload] control thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,959 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,971 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,987 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:52,994 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:53,275 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:53,629 | INFO     | [job] control thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:57:54,984 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:58:45] 2026-01-10 12:58:22,762 | INFO     | PID=322534 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 07:58:45] 2026-01-10 12:58:22,763 | INFO     | .. there are 18 such processes running
[2026-01-10 07:58:45] 2026-01-10 12:58:22,771 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:58:45] 2026-01-10 12:58:22,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:58:45] 2026-01-10 12:58:22,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:58:45] 2026-01-10 12:58:37,398 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:58:45] 2026-01-10 12:58:38,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037485438784)>', '<ExcThread(monitor, started 140037131855616)>']
[2026-01-10 07:58:45] 2026-01-10 12:58:38,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:58:45] 2026-01-10 12:58:38,887 | INFO     | [monitor] control thread has ended
[2026-01-10 07:58:45] 2026-01-10 12:58:43,383 | INFO     | all workflow threads have been joined
[2026-01-10 07:58:45] 2026-01-10 12:58:43,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:58:45] 2026-01-10 12:58:43,384 | INFO     | traces error code: 0
[2026-01-10 07:58:45] 2026-01-10 12:58:43,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:58:45] 2026-01-10 12:58:44,415 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:58:45] 2026-01-10 12:58:44,418 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:58:45] 2026-01-10 12:58:44,421 [wrapper] pilotpid: 322534
[2026-01-10 07:58:45] 2026-01-10 12:58:44,423 [wrapper] Pilot exit status: 0
[2026-01-10 07:58:45] 2026-01-10 12:58:44,469 [wrapper] pandaids: 6963152537
[2026-01-10 07:58:45] 2026-01-10 12:58:44,601 [wrapper] cleanup supervisor_pilot 1962518 322536
[2026-01-10 07:58:45] 2026-01-10 12:58:44,604 [wrapper] Test setup, not cleaning
[2026-01-10 07:58:45] 2026-01-10 12:58:44,606 [wrapper] apfmon messages muted
[2026-01-10 07:58:45] 2026-01-10 12:58:44,609 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:58:45] 2026-01-10 12:58:44,611 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:58:45]  *** Error codes and diagnostics ***
[2026-01-10 07:58:45]     "exeErrorCode": 0,
[2026-01-10 07:58:45]     "exeErrorDiag": "",
[2026-01-10 07:58:45]     "pilotErrorCode": 0,
[2026-01-10 07:58:45]     "pilotErrorDiag": "",
[2026-01-10 07:58:45]  *** Listing of results directory ***
[2026-01-10 07:58:45] total 447800
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 07:58:45] -rwx------. 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas       100 Jan 10 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:58:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 04:09 run_atlas
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas       105 Jan 10 04:09 job.xml
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas 227415352 Jan 10 04:09 EVNT.47898824._000872.pool.root.1
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 04:09 input.tar.gz
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 07:58:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 04:09 shared
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas         0 Jan 10 04:09 boinc_lockfile
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 04:09 pandaJob.out
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas        57 Jan 10 04:09 setup.sh.local
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas    989548 Jan 10 04:10 agis_schedconf.cvmfs.json
[2026-01-10 07:58:45] drwx------. 5 boincer umatlas      4096 Jan 10 04:10 pilot3
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas       531 Jan 10 07:55 boinc_task_state.xml
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas 222845319 Jan 10 07:55 HITS.47898826._029295.pool.root.1
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas      6958 Jan 10 07:56 init_data.xml
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas      1039 Jan 10 07:57 memory_monitor_summary.json
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas   1516240 Jan 10 07:57 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas    471642 Jan 10 07:57 log.47898826._029295.job.log.tgz.1
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas      7780 Jan 10 07:57 heartbeat.json
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas        95 Jan 10 07:58 pilot_heartbeat.json
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas        28 Jan 10 07:58 wrapper_checkpoint.txt
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 07:58 boinc_mmap_file
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas      4824 Jan 10 07:58 pilotlog.txt
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas   1709784 Jan 10 07:58 log.47898826._029295.job.log.1
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas       357 Jan 10 07:58 output.list
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas       620 Jan 10 07:58 runtime_log
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas   2201600 Jan 10 07:58 result.tar.gz
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 07:58 runtime_log.err
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas       656 Jan 10 07:58 KwmLDmgf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjkfKDmn5QfDm.diag
[2026-01-10 07:58:45] -rw-r--r--. 1 boincer umatlas     21167 Jan 10 07:58 stderr.txt
[2026-01-10 07:58:45] HITS file was successfully produced:
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas 222845319 Jan 10 07:55 shared/HITS.pool.root.1
[2026-01-10 07:58:45]  *** Contents of shared directory: ***
[2026-01-10 07:58:45] total 442468
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas 227415352 Jan 10 04:09 ATLAS.root_0
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas    592394 Jan 10 04:09 input.tar.gz
[2026-01-10 07:58:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 04:09 start_atlas.sh
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas 222845319 Jan 10 07:55 HITS.pool.root.1
[2026-01-10 07:58:45] -rw-------. 1 boincer umatlas   2201600 Jan 10 07:58 result.tar.gz
07:58:46 (313902): run_atlas exited; CPU time 45542.846801
07:58:46 (313902): called boinc_finish(0)

</stderr_txt>
]]>

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