Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:57 (1450482): wrapper (7.7.26015): starting
22:50:57 (1450482): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 22:50:57] Arguments: --nthreads 12
[2026-01-10 22:50:57] Threads: 12
[2026-01-10 22:50:57] Checking for CVMFS
[2026-01-10 22:50:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:50:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:50:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:50:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:50:58] 2.13.3.0 4294 4587 100484 154992 0 99 38906215 46080001 1043 130560 0 9476059 99.996 169414 944 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-10 22:50:58] CVMFS is ok
[2026-01-10 22:50:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:50:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:50:58] Further information can be found at the LHC@home message board.
[2026-01-10 22:50:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:50:58] Checking for apptainer binary...
[2026-01-10 22:50:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:50:58] Running /usr/bin/apptainer --version
[2026-01-10 22:50:58] apptainer version 1.4.5-2.el9
[2026-01-10 22:50:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:50:58] gpu01.farm.particle.cz
[2026-01-10 22:50:58] apptainer works
[2026-01-10 22:50:58] Set ATHENA_PROC_NUMBER=12
[2026-01-10 22:50:58] Set ATHENA_CORE_NUMBER=12
[2026-01-10 22:50:58] Starting ATLAS job with PandaID=6961934296
[2026-01-10 22:50:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:48:16]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:48:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 23:48:16]  replicas=None
[2026-01-10 23:48:16]  scope=mc23_13p6TeV
[2026-01-10 23:48:16]  status=None
[2026-01-10 23:48:16]  status_code=0
[2026-01-10 23:48:16]  storage_token=
[2026-01-10 23:48:16]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6961934296/log.47898826._007640.job.log.tgz.1
[2026-01-10 23:48:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/15/log.47898826._007640.job.log.tgz.1
[2026-01-10 23:48:16]  workdir=None
[2026-01-10 23:48:16] ]
[2026-01-10 23:48:16] 2026-01-10 22:47:38,971 | INFO     | transferring file log.47898826._007640.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6961934296/log.47898826._007640.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-10 23:48:16] 2026-01-10 22:47:38,971 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6961934296/log.47898826._007640.job.log.tgz.1 /var/lib/boinc/slots/1/log.47898826._007640.job
[2026-01-10 23:48:16] 2026-01-10 22:47:38,985 | INFO     | adding to output.list: log.47898826._007640.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/15/log.47898826._007640.job.log.tg
[2026-01-10 23:48:16] 2026-01-10 22:47:38,985 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 23:48:16] 2026-01-10 22:47:38,985 | INFO     | summary of transferred files:
[2026-01-10 23:48:16] 2026-01-10 22:47:38,985 | INFO     |  -- lfn=log.47898826._007640.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 23:48:16] 2026-01-10 22:47:38,985 | INFO     | stage-out finished correctly
[2026-01-10 23:48:16] 2026-01-10 22:47:39,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 23:48:16] 2026-01-10 22:47:40,771 | INFO     | time since job start (3394s) is within the limit (174528.0s)
[2026-01-10 23:48:16] 2026-01-10 22:47:41,426 | INFO     | job 6961934296 has state=finished
[2026-01-10 23:48:16] 2026-01-10 22:47:41,426 | INFO     | preparing for final server update for job 6961934296 in state='finished'
[2026-01-10 23:48:16] 2026-01-10 22:47:41,427 | INFO     | this job has now completed (state=finished)
[2026-01-10 23:48:16] 2026-01-10 22:47:41,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 23:48:16] 2026-01-10 22:47:41,427 | INFO     | log transfer has been attempted: DONE
[2026-01-10 23:48:16] 2026-01-10 22:47:41,427 | INFO     | job 6961934296 has finished - writing final server update
[2026-01-10 23:48:16] 2026-01-10 22:47:41,427 | INFO     | total number of processed events: 400 (read)
[2026-01-10 23:48:16] 2026-01-10 22:47:41,428 | INFO     | executing command: lscpu
[2026-01-10 23:48:16] 2026-01-10 22:47:41,452 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 23:48:16] 2026-01-10 22:47:42,777 | INFO     | time since job start (3396s) is within the limit (174528.0s)
[2026-01-10 23:48:16] 2026-01-10 22:47:42,778 | INFO     | 3399s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 23:48:16] 2026-01-10 22:47:43,672 | WARNING  | process 1461044 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 23:48:16] 2026-01-10 22:47:43,673 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6961934296/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:48:16] 2026-01-10 22:47:43,759 | INFO     | number of running child processes to parent process 1461044: 1
[2026-01-10 23:48:16] 2026-01-10 22:47:43,759 | INFO     | maximum number of monitored processes: 6
[2026-01-10 23:48:16] 2026-01-10 22:47:44,071 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 23:48:16] 2026-01-10 22:47:44,074 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3242.5968750000006
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6961934296/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | INFO     | extracted standard info from prmon json
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:48:16] 2026-01-10 22:47:44,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:48:16] 2026-01-10 22:47:44,079 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:48:16] 2026-01-10 22:47:44,079 | INFO     | sum of square deviations: 36465800.0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,079 | INFO     | sum of deviations: -6075369054.000002
[2026-01-10 23:48:16] 2026-01-10 22:47:44,079 | INFO     | mean x: 1768083656.0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,079 | INFO     | mean y: 2850629.673469388
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | intersect: 294573673936.59625
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | chi2: 0.08052586681082687
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | current memory leak: -166.60 B/s (using 49 data points, chi2=0.08)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | could have reported an average CPU frequency of 3227 MHz (5 samples)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | ..............................
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . Timing measurements:
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . get job = 0 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . initial setup = 2 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . payload setup = 3 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . stage-in = 0 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . payload execution = 3371 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . stage-out = 0 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | . log creation = 0 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,080 | INFO     | ..............................
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | 
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | job summary report
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | --------------------------------------------------
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | PanDA job id: 6961934296
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | task id: 47898826
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | errors: (none)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | pilot state: finished 
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | transexitcode: 0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | exeerrorcode: 0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | exeerrordiag: 
[2026-01-10 23:48:16] 2026-01-10 22:47:44,131 | INFO     | exitcode: 0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | exitmsg: OK
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | cpuconsumptiontime: 37332 s
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | nevents: 400
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | neventsw: 0
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | pid: 1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | pgrp: 1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | corecount: 12
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | event service: False
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | sizes: {0: 2283913, 1: 2283913, 3: 2284203, 11: 2284231, 3378: 2309925, 3379: 2319107, 3384: 2319277}
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | --------------------------------------------------
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | 
[2026-01-10 23:48:16] 2026-01-10 22:47:44,132 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-10 23:48:16] 2026-01-10 22:47:44,147 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,147 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,147 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,147 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,149 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:48:16] 2026-01-10 22:47:44,149 | INFO     | job 6961934296 has completed (purged errors)
[2026-01-10 23:48:16] 2026-01-10 22:47:44,149 | INFO     | overall cleanup function is called
[2026-01-10 23:48:16] 2026-01-10 22:47:45,157 | INFO     | --- collectZombieJob: --- 10, [1461044]
[2026-01-10 23:48:16] 2026-01-10 22:47:45,157 | INFO     | zombie collector waiting for pid 1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:45,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:48:16] 2026-01-10 22:47:45,158 | INFO     | collected zombie processes
[2026-01-10 23:48:16] 2026-01-10 22:47:45,158 | INFO     | will attempt to kill all subprocesses of pid=1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:45,245 | INFO     | process IDs to be killed: [1461044] (in reverse order)
[2026-01-10 23:48:16] 2026-01-10 22:47:45,288 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:48:16] 2026-01-10 22:47:45,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:48:16] 2026-01-10 22:47:45,292 | INFO     | did not find any defunct processes belonging to 1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:45,294 | INFO     | did not find any defunct processes belonging to 1461044
[2026-01-10 23:48:16] 2026-01-10 22:47:45,294 | INFO     | ready for new job
[2026-01-10 23:48:16] 2026-01-10 22:47:45,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:48:16] 2026-01-10 22:47:45,295 | INFO     | ***************************************
[2026-01-10 23:48:16] 2026-01-10 22:47:45,295 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:48:16] 2026-01-10 22:47:45,295 | INFO     | ***************************************
[2026-01-10 23:48:16] 2026-01-10 22:47:45,295 | INFO     | 
[2026-01-10 23:48:16] 2026-01-10 22:47:45,297 | INFO     | architecture information:
[2026-01-10 23:48:16] 2026-01-10 22:47:45,297 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:48:16] 2026-01-10 22:47:45,308 | INFO     | cat /etc/os-release:
[2026-01-10 23:48:16] NAME="CentOS Linux"
[2026-01-10 23:48:16] VERSION="7 (Core)"
[2026-01-10 23:48:16] ID="centos"
[2026-01-10 23:48:16] ID_LIKE="rhel fedora"
[2026-01-10 23:48:16] VERSION_ID="7"
[2026-01-10 23:48:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:48:16] ANSI_COLOR="0;31"
[2026-01-10 23:48:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:48:16] HOME_URL="https://www.centos.org/"
[2026-01-10 23:48:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:48:16] 
[2026-01-10 23:48:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:48:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:48:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:48:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:48:16] 
[2026-01-10 23:48:16] 2026-01-10 22:47:45,308 | INFO     | ***************************************
[2026-01-10 23:48:16] 2026-01-10 22:47:45,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | INFO     | sufficient remaining disk space (37627101184 B)
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | INFO     | update_server=False
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:48:16] 2026-01-10 22:47:45,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:48:16] 2026-01-10 22:47:45,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:48:16] 2026-01-10 22:47:45,866 | INFO     | all job control threads have been joined
[2026-01-10 23:48:16] 2026-01-10 22:47:45,892 | INFO     | all payload control threads have been joined
[2026-01-10 23:48:16] 2026-01-10 22:47:46,262 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 23:48:16] 2026-01-10 22:47:46,262 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 23:48:16] 2026-01-10 22:47:46,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:48:16] 2026-01-10 22:47:46,262 | INFO     | will abort loop
[2026-01-10 23:48:16] 2026-01-10 22:47:46,395 | INFO     | all data control threads have been joined
[2026-01-10 23:48:16] 2026-01-10 22:47:46,830 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:46,830 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:46,871 | INFO     | [job] control thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:46,898 | INFO     | [payload] control thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:48:16] 2026-01-10 22:47:47,131 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,267 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,401 | INFO     | [data] control thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,553 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,940 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,953 | INFO     | [job] validate thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:47,968 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:48,007 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:48,034 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:49,052 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:49,830 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:47:56,292 | INFO     | job.realtimelogging is not enabled
[2026-01-10 23:48:16] 2026-01-10 22:47:57,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:48:16] 2026-01-10 22:48:10,487 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:48:16] 2026-01-10 22:48:10,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922639611712)>', '<ExcThread(monitor, started 139922098870016)>']
[2026-01-10 23:48:16] 2026-01-10 22:48:15,562 | INFO     | all workflow threads have been joined
[2026-01-10 23:48:16] 2026-01-10 22:48:15,563 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:48:16] 2026-01-10 22:48:15,563 | INFO     | traces error code: 0
[2026-01-10 23:48:16] 2026-01-10 22:48:15,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:48:16] 2026-01-10 22:48:15,956 | INFO     | PID=1454364 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 23:48:16] 2026-01-10 22:48:15,956 | INFO     | .. there are 2 such processes running
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 23:48:16] 2026-01-10 22:48:15,957 | INFO     | [monitor] control thread has ended
[2026-01-10 23:48:16] 2026-01-10 22:48:16,050 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:48:16] 2026-01-10 22:48:16,052 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:48:16] 2026-01-10 22:48:16,054 [wrapper] pilotpid: 1454364
[2026-01-10 23:48:16] 2026-01-10 22:48:16,056 [wrapper] Pilot exit status: 0
[2026-01-10 23:48:16] 2026-01-10 22:48:16,063 [wrapper] pandaids: 6961934296
[2026-01-10 23:48:16] 2026-01-10 22:48:16,089 [wrapper] cleanup supervisor_pilot 1511876 1454365
[2026-01-10 23:48:16] 2026-01-10 22:48:16,091 [wrapper] Test setup, not cleaning
[2026-01-10 23:48:16] 2026-01-10 22:48:16,093 [wrapper] apfmon messages muted
[2026-01-10 23:48:16] 2026-01-10 22:48:16,095 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:48:16] 2026-01-10 22:48:16,096 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:48:16]  *** Error codes and diagnostics ***
[2026-01-10 23:48:16]     "exeErrorCode": 0,
[2026-01-10 23:48:16]     "exeErrorDiag": "",
[2026-01-10 23:48:16]     "pilotErrorCode": 0,
[2026-01-10 23:48:16]     "pilotErrorDiag": "",
[2026-01-10 23:48:16]  *** Listing of results directory ***
[2026-01-10 23:48:16] total 446600
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc    579449 Jan  7 14:00 pilot3.tar.gz
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc      5112 Jan  7 14:05 queuedata.json
[2026-01-10 23:48:16] -rwx------ 1 boinc boinc     36322 Jan  7 14:06 runpilot2-wrapper.sh
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc       100 Jan 10 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:48:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 22:50 run_atlas
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc       105 Jan 10 22:50 job.xml
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc      9456 Jan 10 22:50 init_data.xml
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc 226176312 Jan 10 22:50 EVNT.47898824._000142.pool.root.1
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc     15847 Jan 10 22:50 start_atlas.sh
[2026-01-10 23:48:16] drwxrwx--x 2 boinc boinc      4096 Jan 10 22:50 shared
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc    592398 Jan 10 22:50 input.tar.gz
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc         0 Jan 10 22:50 boinc_lockfile
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc      2515 Jan 10 22:50 pandaJob.out
[2026-01-10 23:48:16] -rw------- 1 boinc boinc    989548 Jan 10 22:51 agis_schedconf.cvmfs.json
[2026-01-10 23:48:16] -rw------- 1 boinc boinc   1516240 Jan 10 22:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:48:16] drwx------ 5 boinc boinc      4096 Jan 10 22:51 pilot3
[2026-01-10 23:48:16] -rw------- 1 boinc boinc 225419732 Jan 10 23:47 HITS.47898826._007640.pool.root.1
[2026-01-10 23:48:16] -rw------- 1 boinc boinc      1014 Jan 10 23:47 memory_monitor_summary.json
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc       529 Jan 10 23:47 boinc_task_state.xml
[2026-01-10 23:48:16] -rw------- 1 boinc boinc        95 Jan 10 23:47 pilot_heartbeat.json
[2026-01-10 23:48:16] -rw------- 1 boinc boinc    381368 Jan 10 23:47 log.47898826._007640.job.log.tgz.1
[2026-01-10 23:48:16] -rw------- 1 boinc boinc      7769 Jan 10 23:47 heartbeat.json
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc        27 Jan 10 23:48 wrapper_checkpoint.txt
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc      8192 Jan 10 23:48 boinc_mmap_file
[2026-01-10 23:48:16] -rw------- 1 boinc boinc       892 Jan 10 23:48 pilotlog.txt
[2026-01-10 23:48:16] -rw------- 1 boinc boinc    520846 Jan 10 23:48 log.47898826._007640.job.log.1
[2026-01-10 23:48:16] -rw------- 1 boinc boinc       357 Jan 10 23:48 output.list
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc       620 Jan 10 23:48 runtime_log
[2026-01-10 23:48:16] -rw------- 1 boinc boinc    921600 Jan 10 23:48 result.tar.gz
[2026-01-10 23:48:16] -rw------- 1 boinc boinc       659 Jan 10 23:48 z5MMDmvPix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmm2hKDmZyWWMm.diag
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc      8854 Jan 10 23:48 runtime_log.err
[2026-01-10 23:48:16] -rw-r--r-- 1 boinc boinc     21885 Jan 10 23:48 stderr.txt
[2026-01-10 23:48:16] HITS file was successfully produced:
[2026-01-10 23:48:16] -rw------- 1 boinc boinc 225419732 Jan 10 23:47 shared/HITS.pool.root.1
[2026-01-10 23:48:16]  *** Contents of shared directory: ***
[2026-01-10 23:48:16] total 442520
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc 226176312 Jan 10 22:50 ATLAS.root_0
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc     15847 Jan 10 22:50 start_atlas.sh
[2026-01-10 23:48:16] -rw-r--r-- 2 boinc boinc    592398 Jan 10 22:50 input.tar.gz
[2026-01-10 23:48:16] -rw------- 1 boinc boinc 225419732 Jan 10 23:47 HITS.pool.root.1
[2026-01-10 23:48:16] -rw------- 1 boinc boinc    921600 Jan 10 23:48 result.tar.gz
23:48:17 (1450482): run_atlas exited; CPU time 37362.052694
23:48:17 (1450482): called boinc_finish(0)

</stderr_txt>
]]>

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