Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:58:23 (2873583): wrapper (7.7.26015): starting
01:58:23 (2873583): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 01:58:23] Arguments: --nthreads 8
[2026-01-10 01:58:23] Threads: 8
[2026-01-10 01:58:23] Checking for CVMFS
[2026-01-10 01:58:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:58:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:58:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:58:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:58:25] 2.13.3.0 7109 94497 614800 154970 3 491 18081169 21042177 25030 16776704 0 388964776 99.465 514338791 31679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 01:58:25] CVMFS is ok
[2026-01-10 01:58:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:58:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:58:25] Further information can be found at the LHC@home message board.
[2026-01-10 01:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:58:25] Checking for apptainer binary...
[2026-01-10 01:58:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:58:25] Running /usr/bin/apptainer --version
[2026-01-10 01:58:25] apptainer version 1.4.5-2.el9
[2026-01-10 01:58:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:58:25] c-16-11.aglt2.org
[2026-01-10 01:58:25] apptainer works
[2026-01-10 01:58:25] Set ATHENA_PROC_NUMBER=8
[2026-01-10 01:58:25] Set ATHENA_CORE_NUMBER=8
[2026-01-10 01:58:25] Starting ATLAS job with PandaID=6962018626
[2026-01-10 01:58:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:24:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:24:04] 2026-01-10 21:23:19,810 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:24:04] 2026-01-10 21:23:19,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:24:04] 2026-01-10 21:23:19,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:24:04] 2026-01-10 21:23:19,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:24:04] 2026-01-10 21:23:19,884 | INFO     | monitor loop #2947: job 0:6962018626 is in state 'finished'
[2026-01-10 16:24:04] 2026-01-10 21:23:19,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:24:04] 2026-01-10 21:23:19,985 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:24:04] 2026-01-10 21:23:20,010 | INFO     | sum of square deviations: 188424339060.13184
[2026-01-10 16:24:04] 2026-01-10 21:23:20,280 | INFO     | sum of deviations: 431383670304.2158
[2026-01-10 16:24:04] 2026-01-10 21:23:20,281 | INFO     | mean x: 1768054316.289256
[2026-01-10 16:24:04] 2026-01-10 21:23:20,281 | INFO     | mean y: 2519452.4521841793
[2026-01-10 16:24:04] 2026-01-10 21:23:20,316 | INFO     | intersect: -4045310907.8000903
[2026-01-10 16:24:04] 2026-01-10 21:23:20,318 | INFO     | chi2: 5.606104718955127
[2026-01-10 16:24:04] 2026-01-10 21:23:20,319 | INFO     | sum of square deviations: 185107174461.79263
[2026-01-10 16:24:04] 2026-01-10 21:23:20,742 | INFO     | sum of deviations: 596357987313.1814
[2026-01-10 16:24:04] 2026-01-10 21:23:20,743 | INFO     | mean x: 1768054163.7897863
[2026-01-10 16:24:04] 2026-01-10 21:23:20,743 | INFO     | mean y: 2527019.1140142516
[2026-01-10 16:24:04] 2026-01-10 21:23:20,743 | INFO     | intersect: -5693595919.632483
[2026-01-10 16:24:04] 2026-01-10 21:23:20,744 | INFO     | chi2: 3.4075930683839863
[2026-01-10 16:24:04] 2026-01-10 21:23:20,745 | INFO     | current chi2=3.4075930683839863 (change=39.21638572211512 %)
[2026-01-10 16:24:04] 2026-01-10 21:23:20,786 | INFO     | sum of square deviations: 181829019301.18295
[2026-01-10 16:24:04] 2026-01-10 21:23:21,000 | INFO     | sum of deviations: 592889149384.0361
[2026-01-10 16:24:04] 2026-01-10 21:23:21,000 | INFO     | mean x: 1768054011.2867384
[2026-01-10 16:24:04] 2026-01-10 21:23:21,001 | INFO     | mean y: 2526857.6248506573
[2026-01-10 16:24:04] 2026-01-10 21:23:21,001 | INFO     | intersect: -5762559721.214809
[2026-01-10 16:24:04] 2026-01-10 21:23:21,002 | INFO     | chi2: 3.406659476914103
[2026-01-10 16:24:04] 2026-01-10 21:23:21,002 | INFO     | current chi2=3.406659476914103 (change=0.027397387280338886 %)
[2026-01-10 16:24:04] 2026-01-10 21:23:21,003 | INFO     | right removable region: 836
[2026-01-10 16:24:04] 2026-01-10 21:23:21,014 | INFO     | sum of square deviations: 185107076557.21136
[2026-01-10 16:24:04] 2026-01-10 21:23:21,118 | INFO     | sum of deviations: 199983748619.48737
[2026-01-10 16:24:04] 2026-01-10 21:23:21,142 | INFO     | mean x: 1768054468.790974
[2026-01-10 16:24:04] 2026-01-10 21:23:21,142 | INFO     | mean y: 2530083.406175772
[2026-01-10 16:24:04] 2026-01-10 21:23:21,143 | INFO     | intersect: -1907619258.3072574
[2026-01-10 16:24:04] 2026-01-10 21:23:21,155 | INFO     | chi2: 2.957252932638236
[2026-01-10 16:24:04] 2026-01-10 21:23:21,156 | INFO     | current chi2=2.957252932638236 (change=47.249416825210275 %)
[2026-01-10 16:24:04] 2026-01-10 21:23:21,164 | INFO     | sum of square deviations: 181829028818.86942
[2026-01-10 16:24:04] 2026-01-10 21:23:21,334 | INFO     | sum of deviations: 107764525674.4804
[2026-01-10 16:24:04] 2026-01-10 21:23:21,334 | INFO     | mean x: 1768054621.2915173
[2026-01-10 16:24:04] 2026-01-10 21:23:21,334 | INFO     | mean y: 2534370.842293907
[2026-01-10 16:24:04] 2026-01-10 21:23:21,334 | INFO     | intersect: -1045337736.6409128
[2026-01-10 16:24:04] 2026-01-10 21:23:21,350 | INFO     | chi2: 2.561665399238515
[2026-01-10 16:24:04] 2026-01-10 21:23:21,351 | INFO     | current chi2=2.561665399238515 (change=13.376858267135361 %)
[2026-01-10 16:24:04] 2026-01-10 21:23:21,351 | INFO     | left removable region: 20
[2026-01-10 16:24:04] 2026-01-10 21:23:21,352 | INFO     | sum of square deviations: 168483508411.16556
[2026-01-10 16:24:04] 2026-01-10 21:23:21,630 | INFO     | sum of deviations: 167279667555.29053
[2026-01-10 16:24:04] 2026-01-10 21:23:21,630 | INFO     | mean x: 1768054590.7904413
[2026-01-10 16:24:04] 2026-01-10 21:23:21,630 | INFO     | mean y: 2547052.1654411764
[2026-01-10 16:24:04] 2026-01-10 21:23:21,630 | INFO     | intersect: -1752874513.7557845
[2026-01-10 16:24:04] 2026-01-10 21:23:21,632 | INFO     | chi2: 0.10403210143888122
[2026-01-10 16:24:04] 2026-01-10 21:23:21,632 | INFO     | current memory leak: 0.99 B/s (using 816 data points, chi2=0.10)
[2026-01-10 16:24:04] 2026-01-10 21:23:21,651 | INFO     | could have reported an average CPU frequency of 2900 MHz (32 samples)
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | ..............................
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | . Timing measurements:
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | . get job = 0 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | . initial setup = 4 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | . payload setup = 45 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,652 | INFO     | . stage-in = 0 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,653 | INFO     | . payload execution = 51650 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,653 | INFO     | . stage-out = 8 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,653 | INFO     | . log creation = 2 s
[2026-01-10 16:24:04] 2026-01-10 21:23:21,653 | INFO     | ..............................
[2026-01-10 16:24:04] 2026-01-10 21:23:24,184 | INFO     | 
[2026-01-10 16:24:04] 2026-01-10 21:23:24,184 | INFO     | job summary report
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | --------------------------------------------------
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | PanDA job id: 6962018626
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | task id: 47898826
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | errors: (none)
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | pilot state: finished 
[2026-01-10 16:24:04] 2026-01-10 21:23:24,185 | INFO     | transexitcode: 0
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | exeerrorcode: 0
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | exeerrordiag: 
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | exitcode: 0
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | exitmsg: OK
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | cpuconsumptiontime: 112204 s
[2026-01-10 16:24:04] 2026-01-10 21:23:24,186 | INFO     | nevents: 400
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | neventsw: 0
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | pid: 2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | pgrp: 2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | corecount: 8
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | event service: False
[2026-01-10 16:24:04] 2026-01-10 21:23:24,187 | INFO     | sizes: {0: 2283136, 1: 2283737, 2: 2283849, 3: 2284048, 4: 2284048, 15: 2284076, 26: 2284232, 30: 2284522, 38: 2284550, 51702: 2332450, 51704: 2332449, 51715: 2341
[2026-01-10 16:24:04] 2026-01-10 21:23:24,188 | INFO     | --------------------------------------------------
[2026-01-10 16:24:04] 2026-01-10 21:23:24,190 | INFO     | 
[2026-01-10 16:24:04] 2026-01-10 21:23:24,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 16:24:04] 2026-01-10 21:23:24,525 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,525 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,526 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,550 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:24:04] 2026-01-10 21:23:24,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:24:04] 2026-01-10 21:23:24,551 | INFO     | job 6962018626 has completed (purged errors)
[2026-01-10 16:24:04] 2026-01-10 21:23:24,551 | INFO     | overall cleanup function is called
[2026-01-10 16:24:04] 2026-01-10 21:23:25,719 | INFO     | --- collectZombieJob: --- 10, [2890521]
[2026-01-10 16:24:04] 2026-01-10 21:23:25,719 | INFO     | zombie collector waiting for pid 2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:25,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:24:04] 2026-01-10 21:23:25,720 | INFO     | collected zombie processes
[2026-01-10 16:24:04] 2026-01-10 21:23:25,720 | INFO     | will attempt to kill all subprocesses of pid=2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:25,829 | INFO     | PID=2878407 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:24:04] 2026-01-10 21:23:25,844 | INFO     | .. there are 27 such processes running
[2026-01-10 16:24:04] 2026-01-10 21:23:30,063 | INFO     | process IDs to be killed: [2890521] (in reverse order)
[2026-01-10 16:24:04] 2026-01-10 21:23:31,267 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:24:04] 2026-01-10 21:23:31,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:24:04] 2026-01-10 21:23:31,566 | INFO     | did not find any defunct processes belonging to 2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:31,855 | INFO     | did not find any defunct processes belonging to 2890521
[2026-01-10 16:24:04] 2026-01-10 21:23:31,857 | INFO     | ready for new job
[2026-01-10 16:24:04] 2026-01-10 21:23:31,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:24:04] 2026-01-10 21:23:31,866 | INFO     | ***************************************
[2026-01-10 16:24:04] 2026-01-10 21:23:31,866 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:24:04] 2026-01-10 21:23:31,866 | INFO     | ***************************************
[2026-01-10 16:24:04] 2026-01-10 21:23:31,866 | INFO     | 
[2026-01-10 16:24:04] 2026-01-10 21:23:31,868 | INFO     | architecture information:
[2026-01-10 16:24:04] 2026-01-10 21:23:31,875 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:24:04] 2026-01-10 21:23:32,000 | INFO     | cat /etc/os-release:
[2026-01-10 16:24:04] NAME="CentOS Linux"
[2026-01-10 16:24:04] VERSION="7 (Core)"
[2026-01-10 16:24:04] ID="centos"
[2026-01-10 16:24:04] ID_LIKE="rhel fedora"
[2026-01-10 16:24:04] VERSION_ID="7"
[2026-01-10 16:24:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:24:04] ANSI_COLOR="0;31"
[2026-01-10 16:24:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:24:04] HOME_URL="https://www.centos.org/"
[2026-01-10 16:24:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:24:04] 
[2026-01-10 16:24:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:24:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:24:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:24:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:24:04] 
[2026-01-10 16:24:04] 2026-01-10 21:23:32,000 | INFO     | ***************************************
[2026-01-10 16:24:04] 2026-01-10 21:23:32,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 16:24:04] 2026-01-10 21:23:32,745 | INFO     | sufficient remaining disk space (52971962368 B)
[2026-01-10 16:24:04] 2026-01-10 21:23:32,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:24:04] 2026-01-10 21:23:32,746 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:24:04] 2026-01-10 21:23:32,746 | INFO     | update_server=False
[2026-01-10 16:24:04] 2026-01-10 21:23:32,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:24:04] 2026-01-10 21:23:32,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:24:04] 2026-01-10 21:23:32,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:24:04] 2026-01-10 21:23:33,067 | INFO     | all data control threads have been joined
[2026-01-10 16:24:04] 2026-01-10 21:23:33,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:24:04] 2026-01-10 21:23:33,172 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 16:24:04] 2026-01-10 21:23:33,200 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 16:24:04] 2026-01-10 21:23:33,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:24:04] 2026-01-10 21:23:33,200 | INFO     | will abort loop
[2026-01-10 16:24:04] 2026-01-10 21:23:33,276 | INFO     | all payload control threads have been joined
[2026-01-10 16:24:04] 2026-01-10 21:23:33,753 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:33,926 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:33,929 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:33,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:33,953 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,073 | INFO     | [data] control thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,074 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,140 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,142 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,210 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,291 | INFO     | [payload] control thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,463 | INFO     | all job control threads have been joined
[2026-01-10 16:24:04] 2026-01-10 21:23:34,678 | INFO     | [job] validate thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:34,756 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:35,216 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:35,469 | INFO     | [job] control thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:36,782 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:24:04] 2026-01-10 21:23:56,627 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:24:04] 2026-01-10 21:23:58,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017228670784)>', '<ExcThread(monitor, started 140016955135744)>']
[2026-01-10 16:24:04] 2026-01-10 21:24:01,333 | INFO     | PID=2878407 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:24:04] 2026-01-10 21:24:01,333 | INFO     | .. there are 27 such processes running
[2026-01-10 16:24:04] 2026-01-10 21:24:01,333 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:24:04] 2026-01-10 21:24:01,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:24:04] 2026-01-10 21:24:01,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:24:04] 2026-01-10 21:24:01,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:24:04] 2026-01-10 21:24:01,334 | INFO     | [monitor] control thread has ended
[2026-01-10 16:24:04] 2026-01-10 21:24:03,585 | INFO     | all workflow threads have been joined
[2026-01-10 16:24:04] 2026-01-10 21:24:03,585 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:24:04] 2026-01-10 21:24:03,586 | INFO     | traces error code: 0
[2026-01-10 16:24:04] 2026-01-10 21:24:03,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:24:04] 2026-01-10 21:24:04,274 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:24:04] 2026-01-10 21:24:04,278 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:24:04] 2026-01-10 21:24:04,281 [wrapper] pilotpid: 2878407
[2026-01-10 16:24:04] 2026-01-10 21:24:04,285 [wrapper] Pilot exit status: 0
[2026-01-10 16:24:04] 2026-01-10 21:24:04,418 [wrapper] pandaids: 6962018626
[2026-01-10 16:24:04] 2026-01-10 21:24:04,507 [wrapper] cleanup supervisor_pilot 2858137 2878408
[2026-01-10 16:24:04] 2026-01-10 21:24:04,511 [wrapper] Test setup, not cleaning
[2026-01-10 16:24:04] 2026-01-10 21:24:04,514 [wrapper] apfmon messages muted
[2026-01-10 16:24:04] 2026-01-10 21:24:04,518 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:24:04] 2026-01-10 21:24:04,521 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:24:04]  *** Error codes and diagnostics ***
[2026-01-10 16:24:04]     "exeErrorCode": 0,
[2026-01-10 16:24:04]     "exeErrorDiag": "",
[2026-01-10 16:24:04]     "pilotErrorCode": 0,
[2026-01-10 16:24:04]     "pilotErrorDiag": "",
[2026-01-10 16:24:04]  *** Listing of results directory ***
[2026-01-10 16:24:04] total 450148
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-10 16:24:04] -rwx------. 1 boincer umatlas     36322 Jan  7 10:35 runpilot2-wrapper.sh
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:38 queuedata.json
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas       100 Jan 10 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:24:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 01:58 run_atlas
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas       105 Jan 10 01:58 job.xml
[2026-01-10 16:24:04] -rw-r--r--. 2 boincer umatlas 224840707 Jan 10 01:58 EVNT.47898824._000533.pool.root.1
[2026-01-10 16:24:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 16:24:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 01:58 shared
[2026-01-10 16:24:04] -rw-r--r--. 2 boincer umatlas    592392 Jan 10 01:58 input.tar.gz
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas         0 Jan 10 01:58 boinc_lockfile
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas      2516 Jan 10 01:58 pandaJob.out
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas        57 Jan 10 01:58 setup.sh.local
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas    989374 Jan 10 01:59 agis_schedconf.cvmfs.json
[2026-01-10 16:24:04] drwx------. 5 boincer umatlas      4096 Jan 10 01:59 pilot3
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas 217815029 Jan 10 16:19 HITS.47898826._010442.pool.root.1
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas       532 Jan 10 16:19 boinc_task_state.xml
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas      1042 Jan 10 16:22 memory_monitor_summary.json
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas      6525 Jan 10 16:22 init_data.xml
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 16:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas    926465 Jan 10 16:22 log.47898826._010442.job.log.tgz.1
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas        95 Jan 10 16:23 pilot_heartbeat.json
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas      7822 Jan 10 16:23 heartbeat.json
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 16:23 boinc_mmap_file
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas        29 Jan 10 16:23 wrapper_checkpoint.txt
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas      5010 Jan 10 16:24 pilotlog.txt
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas   6265042 Jan 10 16:24 log.47898826._010442.job.log.1
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas       357 Jan 10 16:24 output.list
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 16:24 runtime_log
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas   7208960 Jan 10 16:24 result.tar.gz
[2026-01-10 16:24:04] -rw-------. 1 boincer umatlas       658 Jan 10 16:24 wSqKDmUkkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZQiKDmeEf23n.diag
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 16:24 runtime_log.err
[2026-01-10 16:24:04] -rw-r--r--. 1 boincer umatlas     21305 Jan 10 16:24 stderr.txt
[2026-01-10 16:24:05] HITS file was successfully produced:
[2026-01-10 16:24:05] -rw-------. 1 boincer umatlas 217815029 Jan 10 16:19 shared/HITS.pool.root.1
[2026-01-10 16:24:05]  *** Contents of shared directory: ***
[2026-01-10 16:24:05] total 439924
[2026-01-10 16:24:05] -rw-r--r--. 2 boincer umatlas 224840707 Jan 10 01:58 ATLAS.root_0
[2026-01-10 16:24:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 16:24:05] -rw-r--r--. 2 boincer umatlas    592392 Jan 10 01:58 input.tar.gz
[2026-01-10 16:24:05] -rw-------. 1 boincer umatlas 217815029 Jan 10 16:19 HITS.pool.root.1
[2026-01-10 16:24:05] -rw-------. 1 boincer umatlas   7208960 Jan 10 16:24 result.tar.gz
16:24:06 (2873583): run_atlas exited; CPU time 115080.868391
16:24:06 (2873583): called boinc_finish(0)

</stderr_txt>
]]>

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