Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:17 (32052): wrapper (7.7.26015): starting
09:01:17 (32052): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:01:17] Arguments: --nthreads 8
[2026-01-10 09:01:17] Threads: 8
[2026-01-10 09:01:17] Checking for CVMFS
[2026-01-10 09:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:01:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:01:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:01:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:01:20] 2.11.2.0 25293 36571 132760 154972 3 235 13485086 25165824 899 130560 0 14027528 99.791 9223731 3450 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 09:01:20] CVMFS is ok
[2026-01-10 09:01:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:01:20] Checking for apptainer binary...
[2026-01-10 09:01:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:01:20] Running /usr/bin/apptainer --version
[2026-01-10 09:01:20] apptainer version 1.3.2-1.el7
[2026-01-10 09:01:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:01:44] cg-vwn372.simple-grid.lan
[2026-01-10 09:01:44] apptainer works
[2026-01-10 09:01:44] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:01:44] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:01:44] Starting ATLAS job with PandaID=6963152638
[2026-01-10 09:01:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:17:35]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:17:35] 2026-01-10 14:16:28,568 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:17:35] 2026-01-10 14:16:28,569 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 15:17:35] 2026-01-10 14:16:28,571 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963152638/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,572 | INFO     | extracted standard info from prmon json
[2026-01-10 15:17:35] 2026-01-10 14:16:28,572 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:17:35] 2026-01-10 14:16:28,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:17:35] 2026-01-10 14:16:28,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:17:35] 2026-01-10 14:16:28,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:17:35] 2026-01-10 14:16:28,587 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:17:35] 2026-01-10 14:16:28,588 | INFO     | sum of square deviations: 13872669410.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,592 | INFO     | sum of deviations: 82257161477.00002
[2026-01-10 15:17:35] 2026-01-10 14:16:28,593 | INFO     | mean x: 1768043669.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,593 | INFO     | mean y: 2471862.552112676
[2026-01-10 15:17:35] 2026-01-10 14:16:28,593 | INFO     | intersect: -10481037062.881191
[2026-01-10 15:17:35] 2026-01-10 14:16:28,593 | INFO     | chi2: 9.370490489608727
[2026-01-10 15:17:35] 2026-01-10 14:16:28,594 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 15:17:35] 2026-01-10 14:16:28,598 | INFO     | sum of deviations: 130173365356.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,599 | INFO     | mean x: 1768043516.5
[2026-01-10 15:17:35] 2026-01-10 14:16:28,599 | INFO     | mean y: 2484395.12
[2026-01-10 15:17:35] 2026-01-10 14:16:28,599 | INFO     | intersect: -17309070252.120556
[2026-01-10 15:17:35] 2026-01-10 14:16:28,600 | INFO     | chi2: 7.798632062935101
[2026-01-10 15:17:35] 2026-01-10 14:16:28,600 | INFO     | current chi2=7.798632062935101 (change=16.774558689502072 %)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,600 | INFO     | right removable region: 349
[2026-01-10 15:17:35] 2026-01-10 14:16:28,601 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 15:17:35] 2026-01-10 14:16:28,611 | INFO     | sum of deviations: -43593173772.999985
[2026-01-10 15:17:35] 2026-01-10 14:16:28,611 | INFO     | mean x: 1768043821.5
[2026-01-10 15:17:35] 2026-01-10 14:16:28,611 | INFO     | mean y: 2505054.6742857145
[2026-01-10 15:17:35] 2026-01-10 14:16:28,611 | INFO     | intersect: 5799894852.035848
[2026-01-10 15:17:35] 2026-01-10 14:16:28,612 | INFO     | chi2: 4.488287725099648
[2026-01-10 15:17:35] 2026-01-10 14:16:28,612 | INFO     | current chi2=4.488287725099648 (change=52.10189125022996 %)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,612 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,616 | INFO     | sum of deviations: -132358021796.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,617 | INFO     | mean x: 1768043974.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,617 | INFO     | mean y: 2529123.420289855
[2026-01-10 15:17:35] 2026-01-10 14:16:28,617 | INFO     | intersect: 18381080200.30003
[2026-01-10 15:17:35] 2026-01-10 14:16:28,617 | INFO     | chi2: 2.105001536697946
[2026-01-10 15:17:35] 2026-01-10 14:16:28,618 | INFO     | current chi2=2.105001536697946 (change=53.10012045515171 %)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,618 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,622 | INFO     | sum of deviations: -145546463295.00003
[2026-01-10 15:17:35] 2026-01-10 14:16:28,622 | INFO     | mean x: 1768044126.5
[2026-01-10 15:17:35] 2026-01-10 14:16:28,622 | INFO     | mean y: 2532790.605882353
[2026-01-10 15:17:35] 2026-01-10 14:16:28,623 | INFO     | intersect: 21117156124.64173
[2026-01-10 15:17:35] 2026-01-10 14:16:28,623 | INFO     | chi2: 1.9976492822393523
[2026-01-10 15:17:35] 2026-01-10 14:16:28,623 | INFO     | current chi2=1.9976492822393523 (change=5.099865847461289 %)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,623 | INFO     | left removable region: 30
[2026-01-10 15:17:35] 2026-01-10 14:16:28,624 | INFO     | sum of square deviations: 10065751520.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,627 | INFO     | sum of deviations: -68547590267.99999
[2026-01-10 15:17:35] 2026-01-10 14:16:28,627 | INFO     | mean x: 1768044401.0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,628 | INFO     | mean y: 2538332.9592476487
[2026-01-10 15:17:35] 2026-01-10 14:16:28,628 | INFO     | intersect: 12042889511.365793
[2026-01-10 15:17:35] 2026-01-10 14:16:28,628 | INFO     | chi2: 0.25603016476080886
[2026-01-10 15:17:35] 2026-01-10 14:16:28,628 | INFO     | current memory leak: -6.81 B/s (using 319 data points, chi2=0.26)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,629 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,629 | INFO     | ..............................
[2026-01-10 15:17:35] 2026-01-10 14:16:28,629 | INFO     | . Timing measurements:
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . get job = 0 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . initial setup = 8 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . payload setup = 155 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . stage-in = 0 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . payload execution = 21755 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . stage-out = 4 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | . log creation = 1 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,630 | INFO     | ..............................
[2026-01-10 15:17:35] 2026-01-10 14:16:28,840 | INFO     | 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,840 | INFO     | job summary report
[2026-01-10 15:17:35] 2026-01-10 14:16:28,840 | INFO     | --------------------------------------------------
[2026-01-10 15:17:35] 2026-01-10 14:16:28,840 | INFO     | PanDA job id: 6963152638
[2026-01-10 15:17:35] 2026-01-10 14:16:28,840 | INFO     | task id: 47898826
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | errors: (none)
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | pilot state: finished 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | transexitcode: 0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | exeerrorcode: 0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | exeerrordiag: 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | exitcode: 0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | exitmsg: OK
[2026-01-10 15:17:35] 2026-01-10 14:16:28,841 | INFO     | cpuconsumptiontime: 81793 s
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | nevents: 400
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | neventsw: 0
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | pid: 9849
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | pgrp: 9849
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | corecount: 8
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | event service: False
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 44: 2284081, 55: 2284237, 66: 2284265, 77: 2284293, 87: 2284349, 98: 2284377, 101: 2284947, 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | --------------------------------------------------
[2026-01-10 15:17:35] 2026-01-10 14:16:28,842 | INFO     | 
[2026-01-10 15:17:35] 2026-01-10 14:16:28,843 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-10 15:17:35] 2026-01-10 14:16:29,283 | INFO     | time since job start (22245s) is within the limit (349056.0s)
[2026-01-10 15:17:35] 2026-01-10 14:16:29,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:17:35] 2026-01-10 14:16:29,426 | INFO     | job 6963152638 has completed (purged errors)
[2026-01-10 15:17:35] 2026-01-10 14:16:29,427 | INFO     | overall cleanup function is called
[2026-01-10 15:17:35] 2026-01-10 14:16:30,436 | INFO     | --- collectZombieJob: --- 10, [9849]
[2026-01-10 15:17:35] 2026-01-10 14:16:30,436 | INFO     | zombie collector waiting for pid 9849
[2026-01-10 15:17:35] 2026-01-10 14:16:30,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:17:35] 2026-01-10 14:16:30,436 | INFO     | collected zombie processes
[2026-01-10 15:17:35] 2026-01-10 14:16:30,436 | INFO     | will attempt to kill all subprocesses of pid=9849
[2026-01-10 15:17:35] 2026-01-10 14:16:30,519 | INFO     | process IDs to be killed: [9849] (in reverse order)
[2026-01-10 15:17:35] 2026-01-10 14:16:31,637 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:17:35] 2026-01-10 14:16:31,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:17:35] 2026-01-10 14:16:31,640 | INFO     | did not find any defunct processes belonging to 9849
[2026-01-10 15:17:35] 2026-01-10 14:16:31,645 | INFO     | did not find any defunct processes belonging to 9849
[2026-01-10 15:17:35] 2026-01-10 14:16:31,645 | INFO     | ready for new job
[2026-01-10 15:17:35] 2026-01-10 14:16:31,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:17:35] 2026-01-10 14:16:31,648 | INFO     | ***************************************
[2026-01-10 15:17:35] 2026-01-10 14:16:31,648 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:17:35] 2026-01-10 14:16:31,648 | INFO     | ***************************************
[2026-01-10 15:17:35] 2026-01-10 14:16:31,648 | INFO     | 
[2026-01-10 15:17:35] 2026-01-10 14:16:31,650 | INFO     | pilot is running in a VM
[2026-01-10 15:17:35] 2026-01-10 14:16:31,650 | INFO     | architecture information:
[2026-01-10 15:17:35] 2026-01-10 14:16:31,680 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:17:35] 2026-01-10 14:16:32,054 | INFO     | cat /etc/os-release:
[2026-01-10 15:17:35] NAME="CentOS Linux"
[2026-01-10 15:17:35] VERSION="7 (Core)"
[2026-01-10 15:17:35] ID="centos"
[2026-01-10 15:17:35] ID_LIKE="rhel fedora"
[2026-01-10 15:17:35] VERSION_ID="7"
[2026-01-10 15:17:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:17:35] ANSI_COLOR="0;31"
[2026-01-10 15:17:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:17:35] HOME_URL="https://www.centos.org/"
[2026-01-10 15:17:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:17:35] 
[2026-01-10 15:17:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:17:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:17:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:17:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:17:35] 
[2026-01-10 15:17:35] 2026-01-10 14:16:32,055 | INFO     | ***************************************
[2026-01-10 15:17:35] 2026-01-10 14:16:32,558 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-10 15:17:35] 2026-01-10 14:16:32,879 | INFO     | sufficient remaining disk space (497658363904 B)
[2026-01-10 15:17:35] 2026-01-10 14:16:32,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:17:35] 2026-01-10 14:16:32,879 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:17:35] 2026-01-10 14:16:32,879 | INFO     | update_server=False
[2026-01-10 15:17:35] 2026-01-10 14:16:32,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:17:35] 2026-01-10 14:16:32,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:17:35] 2026-01-10 14:16:32,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:17:35] 2026-01-10 14:16:32,880 | INFO     | aborting loop
[2026-01-10 15:17:35] 2026-01-10 14:16:32,909 | INFO     | all payload control threads have been joined
[2026-01-10 15:17:35] 2026-01-10 14:16:32,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:17:35] 2026-01-10 14:16:33,016 | INFO     | all data control threads have been joined
[2026-01-10 15:17:35] 2026-01-10 14:16:33,037 | INFO     | all job control threads have been joined
[2026-01-10 15:17:35] 2026-01-10 14:16:33,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:17:35] 2026-01-10 14:16:33,886 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:33,886 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:33,915 | INFO     | [payload] control thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,022 | INFO     | [data] control thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,043 | INFO     | [job] control thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,060 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,802 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,829 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,887 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,908 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,924 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:34,997 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:35,036 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:35,326 | INFO     | [job] validate thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:35,369 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:16:36,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:17:35] 2026-01-10 14:17:02,411 | INFO     | PID=3383 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 15:17:35] 2026-01-10 14:17:02,411 | INFO     | .. there are 2 such processes running
[2026-01-10 15:17:35] 2026-01-10 14:17:02,411 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:17:35] 2026-01-10 14:17:02,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:17:35] 2026-01-10 14:17:02,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:17:35] 2026-01-10 14:17:23,163 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:17:35] 2026-01-10 14:17:24,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458390501184)>', '<ExcThread(monitor, started 140457946363648)>']
[2026-01-10 15:17:35] 2026-01-10 14:17:25,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:17:35] 2026-01-10 14:17:25,554 | INFO     | [monitor] control thread has ended
[2026-01-10 15:17:35] 2026-01-10 14:17:30,011 | INFO     | all workflow threads have been joined
[2026-01-10 15:17:35] 2026-01-10 14:17:30,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:17:35] 2026-01-10 14:17:30,011 | INFO     | traces error code: 0
[2026-01-10 15:17:35] 2026-01-10 14:17:30,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:17:35] 2026-01-10 14:17:30,392 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:17:35] 2026-01-10 14:17:30,516 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:17:35] 2026-01-10 14:17:30,613 [wrapper] pilotpid: 3383
[2026-01-10 15:17:35] 2026-01-10 14:17:30,718 [wrapper] Pilot exit status: 0
[2026-01-10 15:17:35] 2026-01-10 14:17:31,181 [wrapper] pandaids: 6963152638
[2026-01-10 15:17:35] 2026-01-10 14:17:32,486 [wrapper] cleanup supervisor_pilot  9051 3384
[2026-01-10 15:17:35] 2026-01-10 14:17:32,619 [wrapper] Test setup, not cleaning
[2026-01-10 15:17:35] 2026-01-10 14:17:32,739 [wrapper] apfmon messages muted
[2026-01-10 15:17:35] 2026-01-10 14:17:32,833 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:17:35] 2026-01-10 14:17:32,946 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:17:35]  *** Error codes and diagnostics ***
[2026-01-10 15:17:35]     "exeErrorCode": 0,
[2026-01-10 15:17:35]     "exeErrorDiag": "",
[2026-01-10 15:17:35]     "pilotErrorCode": 0,
[2026-01-10 15:17:35]     "pilotErrorDiag": "",
[2026-01-10 15:17:35]  *** Listing of results directory ***
[2026-01-10 15:17:35] total 449272
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-10 15:17:35] -rwx------. 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc       100 Jan 10 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:17:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 09:01 run_atlas
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc       105 Jan 10 09:01 job.xml
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc      6391 Jan 10 09:01 init_data.xml
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc 225896788 Jan 10 09:01 EVNT.47898824._000876.pool.root.1
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:01 start_atlas.sh
[2026-01-10 15:17:35] drwxrwx--x. 2 boinc boinc        68 Jan 10 09:01 shared
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc    592405 Jan 10 09:01 input.tar.gz
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc         0 Jan 10 09:01 boinc_lockfile
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc      2518 Jan 10 09:01 pandaJob.out
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc    989374 Jan 10 09:05 agis_schedconf.cvmfs.json
[2026-01-10 15:17:35] drwx------. 5 boinc boinc      4096 Jan 10 09:05 pilot3
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc 223211928 Jan 10 15:12 HITS.47898826._029396.pool.root.1
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc       531 Jan 10 15:13 boinc_task_state.xml
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc      1010 Jan 10 15:14 memory_monitor_summary.json
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc   1516240 Jan 10 15:14 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc    573929 Jan 10 15:14 log.47898826._029396.job.log.tgz.1
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc        95 Jan 10 15:16 pilot_heartbeat.json
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc      7772 Jan 10 15:16 heartbeat.json
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc      8192 Jan 10 15:17 boinc_mmap_file
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc        28 Jan 10 15:17 wrapper_checkpoint.txt
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc      4884 Jan 10 15:17 pilotlog.txt
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc   2947801 Jan 10 15:17 log.47898826._029396.job.log.1
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc       357 Jan 10 15:17 output.list
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc       620 Jan 10 15:17 runtime_log
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc   3543040 Jan 10 15:17 result.tar.gz
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc      8833 Jan 10 15:17 runtime_log.err
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc       657 Jan 10 15:17 qz1NDmMi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlrfKDm6qa2Zm.diag
[2026-01-10 15:17:35] -rw-r--r--. 1 boinc boinc     20765 Jan 10 15:17 stderr.txt
[2026-01-10 15:17:35] HITS file was successfully produced:
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc 223211928 Jan 10 15:12 shared/HITS.pool.root.1
[2026-01-10 15:17:35]  *** Contents of shared directory: ***
[2026-01-10 15:17:35] total 442644
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc 225896788 Jan 10 09:01 ATLAS.root_0
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:01 start_atlas.sh
[2026-01-10 15:17:35] -rw-r--r--. 2 boinc boinc    592405 Jan 10 09:01 input.tar.gz
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc 223211928 Jan 10 15:12 HITS.pool.root.1
[2026-01-10 15:17:35] -rw-------. 1 boinc boinc   3543040 Jan 10 15:17 result.tar.gz
15:17:37 (32052): run_atlas exited; CPU time 82009.582758
15:17:37 (32052): called boinc_finish(0)

</stderr_txt>
]]>

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