Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:25:12 (3299760): wrapper (7.7.26015): starting
23:25:12 (3299760): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 23:25:12] Arguments: --nthreads 9
[2026-01-09 23:25:12] Threads: 9
[2026-01-09 23:25:12] Checking for CVMFS
[2026-01-09 23:25:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:25:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:25:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:25:13] 2.13.3.0 7038 23834 144992 154968 2 104 34191739 40960001 19736 16776704 0 39666540 99.769 27114497 46280 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 23:25:13] CVMFS is ok
[2026-01-09 23:25:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 23:25:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 23:25:13] Further information can be found at the LHC@home message board.
[2026-01-09 23:25:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:25:13] Checking for apptainer binary...
[2026-01-09 23:25:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:25:13] Running /usr/bin/apptainer --version
[2026-01-09 23:25:14] apptainer version 1.4.5-2.el9
[2026-01-09 23:25:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:25:14] c-212-4.aglt2.org
[2026-01-09 23:25:14] apptainer works
[2026-01-09 23:25:14] Set ATHENA_PROC_NUMBER=9
[2026-01-09 23:25:14] Set ATHENA_CORE_NUMBER=9
[2026-01-09 23:25:14] Starting ATLAS job with PandaID=6962014786
[2026-01-09 23:25:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:01:51]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:01:51]  is_tar=False
[2026-01-10 01:01:51]  lfn=log.47898826._008638.job.log.tgz.1
[2026-01-10 01:01:51]  mtime=0
[2026-01-10 01:01:51]  protocol_id=None
[2026-01-10 01:01:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 01:01:51]  replicas=None
[2026-01-10 01:01:51]  scope=mc23_13p6TeV
[2026-01-10 01:01:51]  status=None
[2026-01-10 01:01:51]  status_code=0
[2026-01-10 01:01:51]  storage_token=
[2026-01-10 01:01:51]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6962014786/log.47898826._008638.job.log.tgz.1
[2026-01-10 01:01:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/4a/log.47898826._008638.job.log.tgz.1
[2026-01-10 01:01:51]  workdir=None
[2026-01-10 01:01:51] ]
[2026-01-10 01:01:51] 2026-01-10 06:00:58,580 | INFO     | transferring file log.47898826._008638.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6962014786/log.47898826._008638.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 01:01:51] 2026-01-10 06:00:58,580 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6962014786/log.47898826._008638.job.log.tgz.1 /tmp/boinchome/slots/1/log.47898826._008638.job
[2026-01-10 01:01:51] 2026-01-10 06:00:58,598 | INFO     | adding to output.list: log.47898826._008638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/4a/log.47898826._008638.job.log.tg
[2026-01-10 01:01:51] 2026-01-10 06:00:58,599 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 01:01:51] 2026-01-10 06:00:58,599 | INFO     | summary of transferred files:
[2026-01-10 01:01:51] 2026-01-10 06:00:58,599 | INFO     |  -- lfn=log.47898826._008638.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 01:01:51] 2026-01-10 06:00:58,599 | INFO     | stage-out finished correctly
[2026-01-10 01:01:51] 2026-01-10 06:00:58,632 | INFO     | time since job start (5723s) is within the limit (174528.0s)
[2026-01-10 01:01:51] 2026-01-10 06:00:58,723 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 01:01:51] 2026-01-10 06:01:00,180 | INFO     | monitor loop #399: job 0:6962014786 is in state 'finished'
[2026-01-10 01:01:51] 2026-01-10 06:01:00,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:01:51] 2026-01-10 06:01:00,479 | INFO     | job 6962014786 has state=finished
[2026-01-10 01:01:51] 2026-01-10 06:01:00,480 | INFO     | preparing for final server update for job 6962014786 in state='finished'
[2026-01-10 01:01:51] 2026-01-10 06:01:00,481 | INFO     | this job has now completed (state=finished)
[2026-01-10 01:01:51] 2026-01-10 06:01:00,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 01:01:51] 2026-01-10 06:01:00,481 | INFO     | log transfer has been attempted: DONE
[2026-01-10 01:01:51] 2026-01-10 06:01:00,481 | INFO     | job 6962014786 has finished - writing final server update
[2026-01-10 01:01:51] 2026-01-10 06:01:00,481 | INFO     | total number of processed events: 400 (read)
[2026-01-10 01:01:51] 2026-01-10 06:01:00,482 | INFO     | executing command: lscpu
[2026-01-10 01:01:51] 2026-01-10 06:01:00,532 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 01:01:51] 2026-01-10 06:01:00,648 | INFO     | time since job start (5725s) is within the limit (174528.0s)
[2026-01-10 01:01:51] 2026-01-10 06:01:02,653 | INFO     | time since job start (5727s) is within the limit (174528.0s)
[2026-01-10 01:01:51] 2026-01-10 06:01:02,683 | INFO     | monitor loop #400: job 0:6962014786 is in state 'finished'
[2026-01-10 01:01:51] 2026-01-10 06:01:02,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,845 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 01:01:51] 2026-01-10 06:01:03,849 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3177.1602291666672
[2026-01-10 01:01:51] 2026-01-10 06:01:03,859 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962014786/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,860 | INFO     | extracted standard info from prmon json
[2026-01-10 01:01:51] 2026-01-10 06:01:03,860 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:01:51] 2026-01-10 06:01:03,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:01:51] 2026-01-10 06:01:03,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:01:51] 2026-01-10 06:01:03,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:01:51] 2026-01-10 06:01:03,862 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:01:51] 2026-01-10 06:01:03,862 | INFO     | sum of square deviations: 204163828.0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | sum of deviations: -21195214269.0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | mean x: 1768022101.0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | mean y: 2784639.4827586208
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | intersect: 183549535452.8666
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | chi2: 0.162640781473253
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | current memory leak: -103.81 B/s (using 87 data points, chi2=0.16)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | could have reported an average CPU frequency of 3143 MHz (7 samples)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | ..............................
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | . Timing measurements:
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | . get job = 0 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,863 | INFO     | . initial setup = 2 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | . payload setup = 8 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | . stage-in = 0 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | . payload execution = 5689 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | . stage-out = 0 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | . log creation = 0 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,864 | INFO     | ..............................
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | 
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | job summary report
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | --------------------------------------------------
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | PanDA job id: 6962014786
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | task id: 47898826
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | errors: (none)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | pilot state: finished 
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | transexitcode: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,910 | INFO     | exeerrorcode: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | exeerrordiag: 
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | exitcode: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | exitmsg: OK
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | cpuconsumptiontime: 44368 s
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | nevents: 400
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | neventsw: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | pid: 3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | pgrp: 3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | corecount: 9
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | event service: False
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | sizes: {0: 2283964, 1: 2283964, 11: 2284254, 12: 2284282, 5701: 2310949, 5702: 2320131, 5707: 2320269}
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | --------------------------------------------------
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | 
[2026-01-10 01:01:51] 2026-01-10 06:01:03,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | job 6962014786 has completed (purged errors)
[2026-01-10 01:01:51] 2026-01-10 06:01:03,926 | INFO     | overall cleanup function is called
[2026-01-10 01:01:51] 2026-01-10 06:01:04,933 | INFO     | --- collectZombieJob: --- 10, [3310180]
[2026-01-10 01:01:51] 2026-01-10 06:01:04,933 | INFO     | zombie collector waiting for pid 3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:04,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:01:51] 2026-01-10 06:01:04,933 | INFO     | collected zombie processes
[2026-01-10 01:01:51] 2026-01-10 06:01:04,933 | INFO     | will attempt to kill all subprocesses of pid=3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:05,271 | INFO     | process IDs to be killed: [3310180] (in reverse order)
[2026-01-10 01:01:51] 2026-01-10 06:01:05,379 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:01:51] 2026-01-10 06:01:05,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:01:51] 2026-01-10 06:01:05,393 | INFO     | did not find any defunct processes belonging to 3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:05,405 | INFO     | did not find any defunct processes belonging to 3310180
[2026-01-10 01:01:51] 2026-01-10 06:01:05,405 | INFO     | ready for new job
[2026-01-10 01:01:51] 2026-01-10 06:01:05,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:01:51] 2026-01-10 06:01:05,407 | INFO     | ***************************************
[2026-01-10 01:01:51] 2026-01-10 06:01:05,407 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:01:51] 2026-01-10 06:01:05,408 | INFO     | ***************************************
[2026-01-10 01:01:51] 2026-01-10 06:01:05,408 | INFO     | 
[2026-01-10 01:01:51] 2026-01-10 06:01:05,412 | INFO     | architecture information:
[2026-01-10 01:01:51] 2026-01-10 06:01:05,413 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:01:51] 2026-01-10 06:01:05,426 | INFO     | cat /etc/os-release:
[2026-01-10 01:01:51] NAME="CentOS Linux"
[2026-01-10 01:01:51] VERSION="7 (Core)"
[2026-01-10 01:01:51] ID="centos"
[2026-01-10 01:01:51] ID_LIKE="rhel fedora"
[2026-01-10 01:01:51] VERSION_ID="7"
[2026-01-10 01:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:01:51] ANSI_COLOR="0;31"
[2026-01-10 01:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:01:51] HOME_URL="https://www.centos.org/"
[2026-01-10 01:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:01:51] 
[2026-01-10 01:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:01:51] 
[2026-01-10 01:01:51] 2026-01-10 06:01:05,426 | INFO     | ***************************************
[2026-01-10 01:01:51] 2026-01-10 06:01:05,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 01:01:51] 2026-01-10 06:01:05,941 | INFO     | sufficient remaining disk space (127851823104 B)
[2026-01-10 01:01:51] 2026-01-10 06:01:05,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:01:51] 2026-01-10 06:01:05,941 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:01:51] 2026-01-10 06:01:05,941 | INFO     | update_server=False
[2026-01-10 01:01:51] 2026-01-10 06:01:05,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:01:51] 2026-01-10 06:01:06,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:01:51] 2026-01-10 06:01:06,191 | INFO     | aborting loop
[2026-01-10 01:01:51] 2026-01-10 06:01:06,578 | INFO     | all data control threads have been joined
[2026-01-10 01:01:51] 2026-01-10 06:01:06,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:01:51] 2026-01-10 06:01:06,946 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:06,989 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,117 | INFO     | all payload control threads have been joined
[2026-01-10 01:01:51] 2026-01-10 06:01:07,193 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,233 | INFO     | [job] validate thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,381 | INFO     | all job control threads have been joined
[2026-01-10 01:01:51] 2026-01-10 06:01:07,585 | INFO     | [data] control thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,872 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,878 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,914 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,953 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:07,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:08,091 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:08,119 | INFO     | [payload] control thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:08,386 | INFO     | [job] control thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:08,693 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:08,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:01:51] 2026-01-10 06:01:09,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:01:51] 2026-01-10 06:01:09,925 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:13,303 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:01:51] 2026-01-10 06:01:36,208 | INFO     | PID=3303557 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 01:01:51] 2026-01-10 06:01:36,208 | INFO     | .. there are 15 such processes running
[2026-01-10 01:01:51] 2026-01-10 06:01:36,209 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:01:51] 2026-01-10 06:01:36,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:01:51] 2026-01-10 06:01:36,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:01:51] 2026-01-10 06:01:44,414 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:01:51] 2026-01-10 06:01:46,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257383348032)>', '<ExcThread(monitor, started 140257022424832)>']
[2026-01-10 01:01:51] 2026-01-10 06:01:46,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:01:51] 2026-01-10 06:01:46,248 | INFO     | [monitor] control thread has ended
[2026-01-10 01:01:51] 2026-01-10 06:01:51,061 | INFO     | all workflow threads have been joined
[2026-01-10 01:01:51] 2026-01-10 06:01:51,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:01:51] 2026-01-10 06:01:51,061 | INFO     | traces error code: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:51,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:01:51] 2026-01-10 06:01:51,183 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:01:51] 2026-01-10 06:01:51,186 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:01:51] 2026-01-10 06:01:51,189 [wrapper] pilotpid: 3303557
[2026-01-10 01:01:51] 2026-01-10 06:01:51,192 [wrapper] Pilot exit status: 0
[2026-01-10 01:01:51] 2026-01-10 06:01:51,203 [wrapper] pandaids: 6962014786
[2026-01-10 01:01:51] 2026-01-10 06:01:51,293 [wrapper] cleanup supervisor_pilot 3473936 3303558
[2026-01-10 01:01:51] 2026-01-10 06:01:51,296 [wrapper] Test setup, not cleaning
[2026-01-10 01:01:51] 2026-01-10 06:01:51,299 [wrapper] apfmon messages muted
[2026-01-10 01:01:51] 2026-01-10 06:01:51,302 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:01:51] 2026-01-10 06:01:51,304 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:01:51]  *** Error codes and diagnostics ***
[2026-01-10 01:01:51]     "exeErrorCode": 0,
[2026-01-10 01:01:51]     "exeErrorDiag": "",
[2026-01-10 01:01:51]     "pilotErrorCode": 0,
[2026-01-10 01:01:51]     "pilotErrorDiag": "",
[2026-01-10 01:01:51]  *** Listing of results directory ***
[2026-01-10 01:01:51] total 440512
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-10 01:01:51] -rwx------. 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:31 queuedata.json
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas       100 Jan  9 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:01:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 23:25 run_atlas
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas       105 Jan  9 23:25 job.xml
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas 225898927 Jan  9 23:25 EVNT.47898824._000363.pool.root.1
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 23:25 start_atlas.sh
[2026-01-10 01:01:51] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 23:25 shared
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 23:25 input.tar.gz
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas         0 Jan  9 23:25 boinc_lockfile
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 23:25 pandaJob.out
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas        57 Jan  9 23:25 setup.sh.local
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas    989374 Jan  9 23:25 agis_schedconf.cvmfs.json
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:01:51] drwx------. 5 boincer umatlas      4096 Jan  9 23:25 pilot3
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas      6955 Jan 10 00:55 init_data.xml
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas 218932226 Jan 10 01:00 HITS.47898826._008638.pool.root.1
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas       530 Jan 10 01:00 boinc_task_state.xml
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas      1031 Jan 10 01:00 memory_monitor_summary.json
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas    350282 Jan 10 01:00 log.47898826._008638.job.log.tgz.1
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas      7773 Jan 10 01:01 heartbeat.json
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas        95 Jan 10 01:01 pilot_heartbeat.json
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas        27 Jan 10 01:01 wrapper_checkpoint.txt
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 01:01 boinc_mmap_file
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas      4825 Jan 10 01:01 pilotlog.txt
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas    815054 Jan 10 01:01 log.47898826._008638.job.log.1
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas       357 Jan 10 01:01 output.list
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas       620 Jan 10 01:01 runtime_log
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas   1187840 Jan 10 01:01 result.tar.gz
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas       651 Jan 10 01:01 ZcILDmUgkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMAdKDm0VBnMo.diag
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 01:01 runtime_log.err
[2026-01-10 01:01:51] -rw-r--r--. 1 boincer umatlas     21607 Jan 10 01:01 stderr.txt
[2026-01-10 01:01:51] HITS file was successfully produced:
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas 218932226 Jan 10 01:00 shared/HITS.pool.root.1
[2026-01-10 01:01:51]  *** Contents of shared directory: ***
[2026-01-10 01:01:51] total 436176
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas 225898927 Jan  9 23:25 ATLAS.root_0
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 23:25 start_atlas.sh
[2026-01-10 01:01:51] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 23:25 input.tar.gz
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas 218932226 Jan 10 01:00 HITS.pool.root.1
[2026-01-10 01:01:51] -rw-------. 1 boincer umatlas   1187840 Jan 10 01:01 result.tar.gz
01:01:52 (3299760): run_atlas exited; CPU time 44492.506585
01:01:52 (3299760): called boinc_finish(0)

</stderr_txt>
]]>

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