Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:49:45 (2831483): wrapper (7.7.26015): starting
06:49:45 (2831483): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 06:49:45] Arguments: --nthreads 4
[2026-01-10 06:49:45] Threads: 4
[2026-01-10 06:49:45] Checking for CVMFS
[2026-01-10 06:49:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:49:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:49:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:49:45] 2.13.3.0 3218523 2059 56316 154980 3 83 5307718 6144001 6310 130560 0 8207432 99.944 365928 952 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-10 06:49:45] CVMFS is ok
[2026-01-10 06:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:49:45] Checking for apptainer binary...
[2026-01-10 06:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:49:45] Running /usr/bin/apptainer --version
[2026-01-10 06:49:45] apptainer version 1.4.5
[2026-01-10 06:49:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:49:45] Starfish-Cruncher
[2026-01-10 06:49:45] apptainer works
[2026-01-10 06:49:45] Set ATHENA_PROC_NUMBER=4
[2026-01-10 06:49:45] Set ATHENA_CORE_NUMBER=4
[2026-01-10 06:49:45] Starting ATLAS job with PandaID=6963152289
[2026-01-10 06:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:59:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:59:12] 2026-01-10 14:58:03,710 | INFO     | PID=2835378 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 08:59:12] 2026-01-10 14:58:04,711 | INFO     | time since job start (7690s) is within the limit (349056.0s)
[2026-01-10 08:59:12] 2026-01-10 14:58:04,761 | INFO     | monitor loop #581: job 0:6963152289 is in state 'finished'
[2026-01-10 08:59:12] 2026-01-10 14:58:04,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:59:12] 2026-01-10 14:58:06,716 | INFO     | time since job start (7692s) is within the limit (349056.0s)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,264 | INFO     | monitor loop #582: job 0:6963152289 is in state 'finished'
[2026-01-10 08:59:12] 2026-01-10 14:58:07,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,640 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 08:59:12] 2026-01-10 14:58:07,644 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2532.0527187499997
[2026-01-10 08:59:12] 2026-01-10 14:58:07,648 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6963152289/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,649 | INFO     | extracted standard info from prmon json
[2026-01-10 08:59:12] 2026-01-10 14:58:07,649 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:59:12] 2026-01-10 14:58:07,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:59:12] 2026-01-10 14:58:07,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:59:12] 2026-01-10 14:58:07,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | sum of square deviations: 620244187.5
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | sum of deviations: -4339016131.999997
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | mean x: 1768053228.5
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | mean y: 2357978.9682539683
[2026-01-10 08:59:12] 2026-01-10 14:58:07,651 | INFO     | intersect: 12371053462.625935
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | chi2: 1.6345972021555406
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | sum of deviations: -4645285968.999997
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | mean x: 1768053076.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | mean y: 2357320.3140495867
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | intersect: 14954481041.577364
[2026-01-10 08:59:12] 2026-01-10 14:58:07,652 | INFO     | chi2: 1.6282570142709387
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | current chi2=1.6282570142709387 (change=0.38787463212595086 %)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | right removable region: 120
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | sum of deviations: -17517852449.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | mean x: 1768053381.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | mean y: 2385457.0743801654
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | intersect: 56388395722.239075
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | chi2: 0.2723669150104165
[2026-01-10 08:59:12] 2026-01-10 14:58:07,653 | INFO     | current chi2=0.2723669150104165 (change=83.33736808975038 %)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | sum of deviations: -12030316300.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | mean x: 1768053533.5
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | mean y: 2372628.9137931033
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | intersect: 43951710971.83099
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | chi2: 0.24197114142762632
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | current chi2=0.24197114142762632 (change=11.159862636630333 %)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,654 | INFO     | left removable region: 20
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | sum of square deviations: 310052325.0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | sum of deviations: -765513674.4999995
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | mean x: 1768053655.5
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | mean y: 2339005.91
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | intersect: 4367632027.128149
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | chi2: 0.08697867280525774
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | current memory leak: -2.47 B/s (using 100 data points, chi2=0.09)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,655 | INFO     | could have reported an average CPU frequency of 3445 MHz (8 samples)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | ..............................
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . Timing measurements:
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . get job = 0 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . initial setup = 2 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . payload setup = 4 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . stage-in = 0 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . payload execution = 7654 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . stage-out = 0 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | . log creation = 0 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,656 | INFO     | ..............................
[2026-01-10 08:59:12] 2026-01-10 14:58:07,710 | INFO     | 
[2026-01-10 08:59:12] 2026-01-10 14:58:07,710 | INFO     | job summary report
[2026-01-10 08:59:12] 2026-01-10 14:58:07,710 | INFO     | --------------------------------------------------
[2026-01-10 08:59:12] 2026-01-10 14:58:07,710 | INFO     | PanDA job id: 6963152289
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | task id: 47898826
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | errors: (none)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | pilot state: finished 
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | transexitcode: 0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | exeerrorcode: 0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | exeerrordiag: 
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | exitcode: 0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | exitmsg: OK
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | cpuconsumptiontime: 29690 s
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | nevents: 400
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | neventsw: 0
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | pid: 2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | pgrp: 2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | corecount: 4
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | event service: False
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | sizes: {0: 2283142, 1: 2284005, 4: 2284267, 12: 2284295, 7661: 2312057, 7663: 2321069, 7665: 2321253, 7678: 2321447}
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | --------------------------------------------------
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | 
[2026-01-10 08:59:12] 2026-01-10 14:58:07,711 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-10 08:59:12] 2026-01-10 14:58:07,724 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,724 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,724 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,724 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | job 6963152289 has completed (purged errors)
[2026-01-10 08:59:12] 2026-01-10 14:58:07,725 | INFO     | overall cleanup function is called
[2026-01-10 08:59:12] 2026-01-10 14:58:08,733 | INFO     | --- collectZombieJob: --- 10, [2842187]
[2026-01-10 08:59:12] 2026-01-10 14:58:08,733 | INFO     | zombie collector waiting for pid 2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:08,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:59:12] 2026-01-10 14:58:08,733 | INFO     | collected zombie processes
[2026-01-10 08:59:12] 2026-01-10 14:58:08,733 | INFO     | will attempt to kill all subprocesses of pid=2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:08,852 | INFO     | process IDs to be killed: [2842187] (in reverse order)
[2026-01-10 08:59:12] 2026-01-10 14:58:08,897 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:59:12] 2026-01-10 14:58:08,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:59:12] 2026-01-10 14:58:08,901 | INFO     | did not find any defunct processes belonging to 2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:08,904 | INFO     | did not find any defunct processes belonging to 2842187
[2026-01-10 08:59:12] 2026-01-10 14:58:08,904 | INFO     | ready for new job
[2026-01-10 08:59:12] 2026-01-10 14:58:08,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:59:12] 2026-01-10 14:58:08,906 | INFO     | ***************************************
[2026-01-10 08:59:12] 2026-01-10 14:58:08,906 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:59:12] 2026-01-10 14:58:08,906 | INFO     | ***************************************
[2026-01-10 08:59:12] 2026-01-10 14:58:08,906 | INFO     | 
[2026-01-10 08:59:12] 2026-01-10 14:58:08,907 | INFO     | architecture information:
[2026-01-10 08:59:12] 2026-01-10 14:58:08,908 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:59:12] 2026-01-10 14:58:08,919 | INFO     | cat /etc/os-release:
[2026-01-10 08:59:12] NAME="CentOS Linux"
[2026-01-10 08:59:12] VERSION="7 (Core)"
[2026-01-10 08:59:12] ID="centos"
[2026-01-10 08:59:12] ID_LIKE="rhel fedora"
[2026-01-10 08:59:12] VERSION_ID="7"
[2026-01-10 08:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:59:12] ANSI_COLOR="0;31"
[2026-01-10 08:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:59:12] HOME_URL="https://www.centos.org/"
[2026-01-10 08:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:59:12] 
[2026-01-10 08:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:59:12] 
[2026-01-10 08:59:12] 2026-01-10 14:58:08,919 | INFO     | ***************************************
[2026-01-10 08:59:12] 2026-01-10 14:58:09,422 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-10 08:59:12] 2026-01-10 14:58:09,436 | INFO     | sufficient remaining disk space (1819544649728 B)
[2026-01-10 08:59:12] 2026-01-10 14:58:09,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:59:12] 2026-01-10 14:58:09,436 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:59:12] 2026-01-10 14:58:09,436 | INFO     | update_server=False
[2026-01-10 08:59:12] 2026-01-10 14:58:09,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:59:12] 2026-01-10 14:58:09,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:59:12] 2026-01-10 14:58:09,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:59:12] 2026-01-10 14:58:09,768 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 08:59:12] 2026-01-10 14:58:09,768 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 08:59:12] 2026-01-10 14:58:09,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:59:12] 2026-01-10 14:58:09,768 | INFO     | will abort loop
[2026-01-10 08:59:12] 2026-01-10 14:58:09,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:59:12] 2026-01-10 14:58:10,110 | INFO     | all data control threads have been joined
[2026-01-10 08:59:12] 2026-01-10 14:58:10,442 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,442 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,493 | INFO     | all payload control threads have been joined
[2026-01-10 08:59:12] 2026-01-10 14:58:10,597 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,666 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,708 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,770 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:10,907 | INFO     | all job control threads have been joined
[2026-01-10 08:59:12] 2026-01-10 14:58:10,911 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,116 | INFO     | [data] control thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,499 | INFO     | [payload] control thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,912 | INFO     | [job] control thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,926 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,935 | INFO     | [job] validate thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:11,968 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:13,482 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:19,936 | INFO     | job.realtimelogging is not enabled
[2026-01-10 08:59:12] 2026-01-10 14:58:20,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:59:12] 2026-01-10 14:58:39,903 | INFO     | PID=2835378 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 08:59:12] 2026-01-10 14:58:39,903 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:59:12] 2026-01-10 14:58:39,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:59:12] 2026-01-10 14:58:39,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:59:12] 2026-01-10 14:59:06,112 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:59:12] 2026-01-10 14:59:07,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133820198549312)>', '<ExcThread(monitor, started 133819428497152)>']
[2026-01-10 08:59:12] 2026-01-10 14:59:08,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:59:12] 2026-01-10 14:59:08,047 | INFO     | [monitor] control thread has ended
[2026-01-10 08:59:12] 2026-01-10 14:59:12,252 | INFO     | all workflow threads have been joined
[2026-01-10 08:59:12] 2026-01-10 14:59:12,252 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:59:12] 2026-01-10 14:59:12,252 | INFO     | traces error code: 0
[2026-01-10 08:59:12] 2026-01-10 14:59:12,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:59:12] 2026-01-10 14:59:12,319 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:59:12] 2026-01-10 14:59:12,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:59:12] 2026-01-10 14:59:12,324 [wrapper] pilotpid: 2835378
[2026-01-10 08:59:12] 2026-01-10 14:59:12,326 [wrapper] Pilot exit status: 0
[2026-01-10 08:59:12] 2026-01-10 14:59:12,334 [wrapper] pandaids: 6963152289
[2026-01-10 08:59:12] 2026-01-10 14:59:12,361 [wrapper] cleanup supervisor_pilot 2968099 2835379
[2026-01-10 08:59:12] 2026-01-10 14:59:12,363 [wrapper] Test setup, not cleaning
[2026-01-10 08:59:12] 2026-01-10 14:59:12,365 [wrapper] apfmon messages muted
[2026-01-10 08:59:12] 2026-01-10 14:59:12,367 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:59:12] 2026-01-10 14:59:12,370 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:59:12]  *** Error codes and diagnostics ***
[2026-01-10 08:59:12]     "exeErrorCode": 0,
[2026-01-10 08:59:12]     "exeErrorDiag": "",
[2026-01-10 08:59:12]     "pilotErrorCode": 0,
[2026-01-10 08:59:12]     "pilotErrorDiag": "",
[2026-01-10 08:59:12]  *** Listing of results directory ***
[2026-01-10 08:59:12] total 440644
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-10 08:59:12] -rwx------ 1 boinc boinc     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc      5112 Jan  8 10:09 queuedata.json
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc       100 Jan 10 06:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:59:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 06:49 run_atlas
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc       105 Jan 10 06:49 job.xml
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc      9662 Jan 10 06:49 init_data.xml
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc 224694769 Jan 10 06:49 EVNT.47898824._001139.pool.root.1
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:49 start_atlas.sh
[2026-01-10 08:59:12] drwxrwx--x 2 boinc boinc      4096 Jan 10 06:49 shared
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc    592402 Jan 10 06:49 input.tar.gz
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:49 boinc_lockfile
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc      2519 Jan 10 06:49 pandaJob.out
[2026-01-10 08:59:12] -rw------- 1 boinc boinc    989556 Jan 10 06:49 agis_schedconf.cvmfs.json
[2026-01-10 08:59:12] -rw------- 1 boinc boinc   1516240 Jan 10 06:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:59:12] drwx------ 5 boinc boinc      4096 Jan 10 06:49 pilot3
[2026-01-10 08:59:12] -rw------- 1 boinc boinc 219733149 Jan 10 08:57 HITS.47898826._029090.pool.root.1
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc       529 Jan 10 08:57 boinc_task_state.xml
[2026-01-10 08:59:12] -rw------- 1 boinc boinc      1022 Jan 10 08:57 memory_monitor_summary.json
[2026-01-10 08:59:12] -rw------- 1 boinc boinc    314494 Jan 10 08:57 log.47898826._029090.job.log.tgz.1
[2026-01-10 08:59:12] -rw------- 1 boinc boinc      7750 Jan 10 08:58 heartbeat.json
[2026-01-10 08:59:12] -rw------- 1 boinc boinc        95 Jan 10 08:58 pilot_heartbeat.json
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc        27 Jan 10 08:59 wrapper_checkpoint.txt
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc      8192 Jan 10 08:59 boinc_mmap_file
[2026-01-10 08:59:12] -rw------- 1 boinc boinc      5015 Jan 10 08:59 pilotlog.txt
[2026-01-10 08:59:12] -rw------- 1 boinc boinc   1124373 Jan 10 08:59 log.47898826._029090.job.log.1
[2026-01-10 08:59:12] -rw------- 1 boinc boinc       357 Jan 10 08:59 output.list
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc       620 Jan 10 08:59 runtime_log
[2026-01-10 08:59:12] -rw------- 1 boinc boinc   1454080 Jan 10 08:59 result.tar.gz
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc      8933 Jan 10 08:59 runtime_log.err
[2026-01-10 08:59:12] -rw------- 1 boinc boinc       652 Jan 10 08:59 C0uMDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2qfKDmln9oSn.diag
[2026-01-10 08:59:12] -rw-r--r-- 1 boinc boinc     21118 Jan 10 08:59 stderr.txt
[2026-01-10 08:59:12] HITS file was successfully produced:
[2026-01-10 08:59:12] -rw------- 1 boinc boinc 219733149 Jan 10 08:57 shared/HITS.pool.root.1
[2026-01-10 08:59:12]  *** Contents of shared directory: ***
[2026-01-10 08:59:12] total 436040
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc 224694769 Jan 10 06:49 ATLAS.root_0
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:49 start_atlas.sh
[2026-01-10 08:59:12] -rw-r--r-- 2 boinc boinc    592402 Jan 10 06:49 input.tar.gz
[2026-01-10 08:59:12] -rw------- 1 boinc boinc 219733149 Jan 10 08:57 HITS.pool.root.1
[2026-01-10 08:59:12] -rw------- 1 boinc boinc   1454080 Jan 10 08:59 result.tar.gz
08:59:13 (2831483): run_atlas exited; CPU time 29783.115708
08:59:13 (2831483): called boinc_finish(0)

</stderr_txt>
]]>

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