Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:29 (2555190): wrapper (7.7.26015): starting
00:03:29 (2555190): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 00:03:29] Arguments: --nthreads 12
[2026-01-10 00:03:29] Threads: 12
[2026-01-10 00:03:29] Checking for CVMFS
[2026-01-10 00:03:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:03:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:03:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:03:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:03:31] 2.13.3.0 6683 14984 158596 154968 0 64 33643457 40960001 22305 16776704 0 21268589 99.758 16217919 39922 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 00:03:31] CVMFS is ok
[2026-01-10 00:03:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:03:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:03:31] Further information can be found at the LHC@home message board.
[2026-01-10 00:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:03:31] Checking for apptainer binary...
[2026-01-10 00:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:03:31] Running /usr/bin/apptainer --version
[2026-01-10 00:03:31] apptainer version 1.4.5-2.el9
[2026-01-10 00:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:03:32] c-211-35-3.aglt2.org
[2026-01-10 00:03:32] apptainer works
[2026-01-10 00:03:32] Set ATHENA_PROC_NUMBER=12
[2026-01-10 00:03:32] Set ATHENA_CORE_NUMBER=12
[2026-01-10 00:03:32] Starting ATLAS job with PandaID=6962916107
[2026-01-10 00:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:28:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:28:52] 2026-01-10 08:17:04,641 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:28:52] 2026-01-10 08:17:04,644 | INFO     | sum of square deviations: 2028149761.1016088
[2026-01-10 06:28:52] 2026-01-10 08:17:04,646 | INFO     | sum of deviations: 42115887965.62032
[2026-01-10 06:28:52] 2026-01-10 08:17:04,646 | INFO     | mean x: 1768027263.855615
[2026-01-10 06:28:52] 2026-01-10 08:17:04,647 | INFO     | mean y: 2685960.1711229947
[2026-01-10 06:28:52] 2026-01-10 08:17:04,647 | INFO     | intersect: -36711584155.78943
[2026-01-10 06:28:52] 2026-01-10 08:17:04,647 | INFO     | chi2: 1.5978191877003665
[2026-01-10 06:28:52] 2026-01-10 08:17:04,647 | INFO     | sum of square deviations: 1869792137.1923082
[2026-01-10 06:28:52] 2026-01-10 08:17:04,648 | INFO     | sum of deviations: 40397147027.80769
[2026-01-10 06:28:52] 2026-01-10 08:17:04,648 | INFO     | mean x: 1768027111.3461537
[2026-01-10 06:28:52] 2026-01-10 08:17:04,649 | INFO     | mean y: 2684310.2252747254
[2026-01-10 06:28:52] 2026-01-10 08:17:04,649 | INFO     | intersect: -38195813664.76905
[2026-01-10 06:28:52] 2026-01-10 08:17:04,653 | INFO     | chi2: 1.598565598148057
[2026-01-10 06:28:52] 2026-01-10 08:17:04,653 | INFO     | current chi2=1.598565598148057 (change=-0.0467143249646974 %)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,653 | INFO     | right removable region: 181
[2026-01-10 06:28:52] 2026-01-10 08:17:04,653 | INFO     | sum of square deviations: 1869774268.5934007
[2026-01-10 06:28:52] 2026-01-10 08:17:04,658 | INFO     | sum of deviations: 7195495857.98901
[2026-01-10 06:28:52] 2026-01-10 08:17:04,658 | INFO     | mean x: 1768027416.3736265
[2026-01-10 06:28:52] 2026-01-10 08:17:04,658 | INFO     | mean y: 2719257.456043956
[2026-01-10 06:28:52] 2026-01-10 08:17:04,658 | INFO     | intersect: -6801221819.825899
[2026-01-10 06:28:52] 2026-01-10 08:17:04,659 | INFO     | chi2: 0.028255068618124848
[2026-01-10 06:28:52] 2026-01-10 08:17:04,659 | INFO     | current chi2=0.028255068618124848 (change=98.23164793390731 %)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,659 | INFO     | sum of square deviations: 1719875397.7401204
[2026-01-10 06:28:52] 2026-01-10 08:17:04,660 | INFO     | sum of deviations: 5414993844.807906
[2026-01-10 06:28:52] 2026-01-10 08:17:04,660 | INFO     | mean x: 1768027568.8870056
[2026-01-10 06:28:52] 2026-01-10 08:17:04,661 | INFO     | mean y: 2721004.0903954804
[2026-01-10 06:28:52] 2026-01-10 08:17:04,661 | INFO     | intersect: -5563879003.999532
[2026-01-10 06:28:52] 2026-01-10 08:17:04,661 | INFO     | chi2: 0.003811769262047794
[2026-01-10 06:28:52] 2026-01-10 08:17:04,661 | INFO     | current chi2=0.003811769262047794 (change=86.50943194099112 %)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,665 | INFO     | sum of square deviations: 1578220645.1162763
[2026-01-10 06:28:52] 2026-01-10 08:17:04,666 | INFO     | sum of deviations: 3734162356.7441854
[2026-01-10 06:28:52] 2026-01-10 08:17:04,667 | INFO     | mean x: 1768027721.3953488
[2026-01-10 06:28:52] 2026-01-10 08:17:04,668 | INFO     | mean y: 2722805.430232558
[2026-01-10 06:28:52] 2026-01-10 08:17:04,668 | INFO     | intersect: -4180534195.639028
[2026-01-10 06:28:52] 2026-01-10 08:17:04,669 | INFO     | chi2: 0.001980030002137066
[2026-01-10 06:28:52] 2026-01-10 08:17:04,669 | INFO     | current chi2=0.001980030002137066 (change=48.05483055201154 %)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,669 | INFO     | sum of square deviations: 1444544326.8263497
[2026-01-10 06:28:52] 2026-01-10 08:17:04,674 | INFO     | sum of deviations: 2947393783.8562875
[2026-01-10 06:28:52] 2026-01-10 08:17:04,674 | INFO     | mean x: 1768027873.9161677
[2026-01-10 06:28:52] 2026-01-10 08:17:04,674 | INFO     | mean y: 2723701.275449102
[2026-01-10 06:28:52] 2026-01-10 08:17:04,675 | INFO     | intersect: -3604693716.4467487
[2026-01-10 06:28:52] 2026-01-10 08:17:04,675 | INFO     | chi2: 0.0017218795196142257
[2026-01-10 06:28:52] 2026-01-10 08:17:04,675 | INFO     | current chi2=0.0017218795196142257 (change=13.037705602653284 %)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,675 | INFO     | left removable region: 40
[2026-01-10 06:28:52] 2026-01-10 08:17:04,676 | INFO     | sum of square deviations: 869434964.0
[2026-01-10 06:28:52] 2026-01-10 08:17:04,676 | INFO     | sum of deviations: 1274034534.0000002
[2026-01-10 06:28:52] 2026-01-10 08:17:04,676 | INFO     | mean x: 1768028301.0
[2026-01-10 06:28:52] 2026-01-10 08:17:04,676 | INFO     | mean y: 2724371.6808510637
[2026-01-10 06:28:52] 2026-01-10 08:17:04,677 | INFO     | intersect: -2588072186.81061
[2026-01-10 06:28:52] 2026-01-10 08:17:04,677 | INFO     | chi2: 0.001233741958124714
[2026-01-10 06:28:52] 2026-01-10 08:17:04,677 | INFO     | current memory leak: 1.47 B/s (using 141 data points, chi2=0.00)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,677 | INFO     | could have reported an average CPU frequency of 2688 MHz (10 samples)
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | ..............................
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . Timing measurements:
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . get job = 0 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . initial setup = 3 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . payload setup = 36 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . stage-in = 0 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . payload execution = 11420 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . stage-out = 4 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | . log creation = 1 s
[2026-01-10 06:28:52] 2026-01-10 08:17:04,678 | INFO     | ..............................
[2026-01-10 06:28:52] 2026-01-10 08:17:05,040 | INFO     | time since job start (11559s) is within the limit (174528.0s)
[2026-01-10 06:28:52] 2026-01-10 08:17:05,189 | INFO     | 
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | job summary report
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | --------------------------------------------------
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | PanDA job id: 6962916107
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | task id: 47898826
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | errors: (none)
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | pilot state: finished 
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | transexitcode: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:05,190 | INFO     | exeerrorcode: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | exeerrordiag: 
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | exitcode: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | exitmsg: OK
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | cpuconsumptiontime: 61097 s
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | nevents: 400
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | neventsw: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | pid: 2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | pgrp: 2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | corecount: 12
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | event service: False
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 27: 2284370, 35: 2284526, 11461: 2313977, 11462: 2313976, 11468: 2323030, 11469: 2323086, 114
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | --------------------------------------------------
[2026-01-10 06:28:52] 2026-01-10 08:17:05,191 | INFO     | 
[2026-01-10 06:28:52] 2026-01-10 08:17:05,192 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:28:52] 2026-01-10 08:17:05,253 | INFO     | job 6962916107 has completed (purged errors)
[2026-01-10 06:28:52] 2026-01-10 08:17:05,253 | INFO     | overall cleanup function is called
[2026-01-10 06:28:52] 2026-01-10 08:17:06,266 | INFO     | --- collectZombieJob: --- 10, [2569216]
[2026-01-10 06:28:52] 2026-01-10 08:17:06,267 | INFO     | zombie collector waiting for pid 2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:06,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:28:52] 2026-01-10 08:17:06,267 | INFO     | collected zombie processes
[2026-01-10 06:28:52] 2026-01-10 08:17:06,267 | INFO     | will attempt to kill all subprocesses of pid=2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:07,497 | INFO     | PID=2561769 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 06:28:52] 2026-01-10 08:17:07,497 | INFO     | .. there are 17 such processes running
[2026-01-10 06:28:52] 2026-01-10 08:17:07,708 | INFO     | process IDs to be killed: [2569216] (in reverse order)
[2026-01-10 06:28:52] 2026-01-10 08:17:07,962 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:28:52] 2026-01-10 08:17:07,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:28:52] 2026-01-10 08:17:08,049 | INFO     | did not find any defunct processes belonging to 2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:08,165 | INFO     | did not find any defunct processes belonging to 2569216
[2026-01-10 06:28:52] 2026-01-10 08:17:08,166 | INFO     | ready for new job
[2026-01-10 06:28:52] 2026-01-10 08:17:08,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:28:52] 2026-01-10 08:17:08,167 | INFO     | ***************************************
[2026-01-10 06:28:52] 2026-01-10 08:17:08,168 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:28:52] 2026-01-10 08:17:08,168 | INFO     | ***************************************
[2026-01-10 06:28:52] 2026-01-10 08:17:08,168 | INFO     | 
[2026-01-10 06:28:52] 2026-01-10 08:17:08,199 | INFO     | architecture information:
[2026-01-10 06:28:52] 2026-01-10 08:17:08,208 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:28:52] 2026-01-10 08:17:08,281 | INFO     | cat /etc/os-release:
[2026-01-10 06:28:52] NAME="CentOS Linux"
[2026-01-10 06:28:52] VERSION="7 (Core)"
[2026-01-10 06:28:52] ID="centos"
[2026-01-10 06:28:52] ID_LIKE="rhel fedora"
[2026-01-10 06:28:52] VERSION_ID="7"
[2026-01-10 06:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:28:52] ANSI_COLOR="0;31"
[2026-01-10 06:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:28:52] HOME_URL="https://www.centos.org/"
[2026-01-10 06:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:28:52] 
[2026-01-10 06:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:28:52] 
[2026-01-10 06:28:52] 2026-01-10 08:17:08,281 | INFO     | ***************************************
[2026-01-10 06:28:52] 2026-01-10 08:17:08,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 06:28:52] 2026-01-10 08:17:08,839 | INFO     | sufficient remaining disk space (125201022976 B)
[2026-01-10 06:28:52] 2026-01-10 08:17:08,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:28:52] 2026-01-10 08:17:08,839 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:28:52] 2026-01-10 08:17:08,839 | INFO     | update_server=False
[2026-01-10 06:28:52] 2026-01-10 08:17:08,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:28:52] 2026-01-10 08:17:08,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:28:52] 2026-01-10 08:17:08,841 | INFO     | aborting loop
[2026-01-10 06:28:52] 2026-01-10 08:17:08,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:28:52] 2026-01-10 08:17:09,352 | INFO     | all data control threads have been joined
[2026-01-10 06:28:52] 2026-01-10 08:17:09,469 | INFO     | all payload control threads have been joined
[2026-01-10 06:28:52] 2026-01-10 08:17:09,846 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:09,846 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:09,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:28:52] 2026-01-10 08:17:10,029 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,033 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,045 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:28:52] 2026-01-10 08:17:10,359 | INFO     | [data] control thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,374 | INFO     | all job control threads have been joined
[2026-01-10 06:28:52] 2026-01-10 08:17:10,420 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,476 | INFO     | [payload] control thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,532 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:10,938 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:11,009 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:11,267 | INFO     | [job] validate thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:11,343 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:11,380 | INFO     | [job] control thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:12,298 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:12,880 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:28:52] 2026-01-10 08:17:42,834 | INFO     | PID=2561769 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 06:28:52] 2026-01-10 08:17:42,835 | INFO     | .. there are 17 such processes running
[2026-01-10 06:28:52] 2026-01-10 08:17:42,835 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:28:52] 2026-01-10 08:17:42,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:28:52] 2026-01-10 08:17:42,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:28:52] 2026-01-10 08:17:46,409 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:28:52] 2026-01-10 08:17:47,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899526076224)>', '<ExcThread(monitor, started 139899244087040)>']
[2026-01-10 06:28:52] 2026-01-10 08:17:47,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:28:52] 2026-01-10 08:17:47,866 | INFO     | [monitor] control thread has ended
[2026-01-10 06:28:52] 2026-01-10 08:17:52,067 | INFO     | all workflow threads have been joined
[2026-01-10 06:28:52] 2026-01-10 08:17:52,068 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:28:52] 2026-01-10 08:17:52,068 | INFO     | traces error code: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:52,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:28:52] 2026-01-10 08:17:52,379 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:28:52] 2026-01-10 08:17:52,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:28:52] 2026-01-10 08:17:52,475 [wrapper] pilotpid: 2561769
[2026-01-10 06:28:52] 2026-01-10 08:17:52,483 [wrapper] Pilot exit status: 0
[2026-01-10 06:28:52] 2026-01-10 08:17:52,638 [wrapper] pandaids: 6962916107
[2026-01-10 06:28:52] 2026-01-10 08:17:52,943 [wrapper] cleanup supervisor_pilot 2916478 2561770
[2026-01-10 06:28:52] 2026-01-10 08:17:52,995 [wrapper] Test setup, not cleaning
[2026-01-10 06:28:52] 2026-01-10 08:17:53,014 [wrapper] apfmon messages muted
[2026-01-10 06:28:52] 2026-01-10 08:17:53,026 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:28:52] 2026-01-10 08:17:53,042 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:28:52]  *** Error codes and diagnostics ***
[2026-01-10 06:28:52]     "exeErrorCode": 0,
[2026-01-10 06:28:52]     "exeErrorDiag": "",
[2026-01-10 06:28:52]     "pilotErrorCode": 0,
[2026-01-10 06:28:52]     "pilotErrorDiag": "",
[2026-01-10 06:28:52]  *** Listing of results directory ***
[2026-01-10 06:28:52] total 442244
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-10 06:28:52] -rwx------. 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:05 queuedata.json
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas       100 Jan 10 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:28:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 00:03 run_atlas
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas       105 Jan 10 00:03 job.xml
[2026-01-10 06:28:52] -rw-r--r--. 2 boincer umatlas 223147392 Jan 10 00:03 EVNT.47898824._000445.pool.root.1
[2026-01-10 06:28:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:03 start_atlas.sh
[2026-01-10 06:28:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 00:03 shared
[2026-01-10 06:28:52] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 00:03 input.tar.gz
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas         0 Jan 10 00:03 boinc_lockfile
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 00:03 pandaJob.out
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas        57 Jan 10 00:03 setup.sh.local
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas    989374 Jan 10 00:04 agis_schedconf.cvmfs.json
[2026-01-10 06:28:52] drwx------. 5 boincer umatlas      4096 Jan 10 00:04 pilot3
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas 221738275 Jan 10 03:15 HITS.47898826._018694.pool.root.1
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas       530 Jan 10 03:15 boinc_task_state.xml
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas      1048 Jan 10 03:16 memory_monitor_summary.json
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:16 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas    491095 Jan 10 03:16 log.47898826._018694.job.log.tgz.1
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas        95 Jan 10 03:16 pilot_heartbeat.json
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas      7841 Jan 10 03:17 heartbeat.json
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas      4825 Jan 10 03:17 pilotlog.txt
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas   1532672 Jan 10 03:17 log.47898826._018694.job.log.1
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas       357 Jan 10 03:17 output.list
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:17 runtime_log
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas   2048000 Jan 10 03:17 result.tar.gz
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas      9355 Jan 10 03:17 runtime_log.err
[2026-01-10 06:28:52] -rw-------. 1 boincer umatlas       657 Jan 10 03:17 7BHKDmEA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUYjKDm96itPo.diag
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas      6858 Jan 10 06:19 init_data.xml
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas        27 Jan 10 06:28 wrapper_checkpoint.txt
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 06:28 boinc_mmap_file
[2026-01-10 06:28:52] -rw-r--r--. 1 boincer umatlas     21205 Jan 10 06:28 stderr.txt
[2026-01-10 06:28:53] HITS file was successfully produced:
[2026-01-10 06:28:53] -rw-------. 1 boincer umatlas 221738275 Jan 10 03:15 shared/HITS.pool.root.1
[2026-01-10 06:28:53]  *** Contents of shared directory: ***
[2026-01-10 06:28:53] total 437068
[2026-01-10 06:28:53] -rw-r--r--. 2 boincer umatlas 223147392 Jan 10 00:03 ATLAS.root_0
[2026-01-10 06:28:53] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:03 start_atlas.sh
[2026-01-10 06:28:53] -rw-r--r--. 2 boincer umatlas    592396 Jan 10 00:03 input.tar.gz
[2026-01-10 06:28:53] -rw-------. 1 boincer umatlas 221738275 Jan 10 03:15 HITS.pool.root.1
[2026-01-10 06:28:53] -rw-------. 1 boincer umatlas   2048000 Jan 10 03:17 result.tar.gz
06:28:54 (2555190): run_atlas exited; CPU time 61474.519050
06:28:54 (2555190): called boinc_finish(0)

</stderr_txt>
]]>

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