Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:14:32 (4039): wrapper (7.7.26015): starting
03:14:32 (4039): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 03:14:32] Arguments: --nthreads 4
[2026-01-10 03:14:32] Threads: 4
[2026-01-10 03:14:32] Checking for CVMFS
[2026-01-10 03:14:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:15:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:15:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:15:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:15:01] 2.11.5.0 4260 0 23608 154965 3 1 3611350 4194304 0 130560 0 0 0.000 1335 554 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-01-10 03:15:01] CVMFS is ok
[2026-01-10 03:15:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:15:01] Checking for apptainer binary...
[2026-01-10 03:15:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:15:01] Running /usr/bin/apptainer --version
[2026-01-10 03:15:02] apptainer version 1.0.3
[2026-01-10 03:15:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:15:03] TeeC20
[2026-01-10 03:15:03] apptainer works
[2026-01-10 03:15:04] Set ATHENA_PROC_NUMBER=4
[2026-01-10 03:15:04] Set ATHENA_CORE_NUMBER=4
[2026-01-10 03:15:04] Starting ATLAS job with PandaID=6963152844
[2026-01-10 03:15:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:37:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:37:38] 2026-01-10 07:37:02,233 | INFO     | log transfer has been attempted: DONE
[2026-01-10 07:37:38] 2026-01-10 07:37:02,234 | INFO     | job 6963152844 has finished - writing final server update
[2026-01-10 07:37:38] 2026-01-10 07:37:02,234 | INFO     | total number of processed events: 400 (read)
[2026-01-10 07:37:38] 2026-01-10 07:37:02,236 | INFO     | executing command: lscpu
[2026-01-10 07:37:38] 2026-01-10 07:37:02,269 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 07:37:38] 2026-01-10 07:37:02,998 | INFO     | time since job start (15656s) is within the limit (349056.0s)
[2026-01-10 07:37:38] 2026-01-10 07:37:03,184 | INFO     | monitor loop #1156: job 0:6963152844 is in state 'finished'
[2026-01-10 07:37:38] 2026-01-10 07:37:03,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,002 | INFO     | time since job start (15659s) is within the limit (349056.0s)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,621 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:37:38] 2026-01-10 07:37:05,622 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3223.309
[2026-01-10 07:37:38] 2026-01-10 07:37:05,622 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-6963152844/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,623 | INFO     | extracted standard info from prmon json
[2026-01-10 07:37:38] 2026-01-10 07:37:05,623 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:37:38] 2026-01-10 07:37:05,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:37:38] 2026-01-10 07:37:05,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:37:38] 2026-01-10 07:37:05,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:37:38] 2026-01-10 07:37:05,625 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:37:38] 2026-01-10 07:37:05,625 | INFO     | sum of square deviations: 5202255680.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,626 | INFO     | sum of deviations: -7597449319.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,626 | INFO     | mean x: 1768022764.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,626 | INFO     | mean y: 2367897.41796875
[2026-01-10 07:37:38] 2026-01-10 07:37:05,627 | INFO     | intersect: 2584413874.2529697
[2026-01-10 07:37:38] 2026-01-10 07:37:05,627 | INFO     | chi2: 1.476764619232049
[2026-01-10 07:37:38] 2026-01-10 07:37:05,627 | INFO     | sum of square deviations: 4903347750.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | sum of deviations: -7252288658.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | mean x: 1768022612.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | mean y: 2368073.537848606
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | intersect: 2617359093.9269557
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | chi2: 1.4766450055063243
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | current chi2=1.4766450055063243 (change=0.008099715023431918 %)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | right removable region: 250
[2026-01-10 07:37:38] 2026-01-10 07:37:05,628 | INFO     | sum of square deviations: 4903347750.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | sum of deviations: -41310661987.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | mean x: 1768022917.0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | mean y: 2384921.239043825
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | intersect: 14897962561.934986
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | chi2: 0.06695680104411736
[2026-01-10 07:37:38] 2026-01-10 07:37:05,629 | INFO     | current chi2=0.06695680104411736 (change=95.46598014523559 %)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,630 | INFO     | sum of square deviations: 4616114457.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | sum of deviations: -38864402045.00001
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | mean x: 1768023069.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | mean y: 2383620.463414634
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | intersect: 14887880943.052927
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | chi2: 0.06689029401374268
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | current chi2=0.06689029401374268 (change=0.09932826738670102 %)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,631 | INFO     | left removable region: 20
[2026-01-10 07:37:38] 2026-01-10 07:37:05,632 | INFO     | sum of square deviations: 3772712597.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | sum of deviations: -31453359636.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | mean x: 1768023191.5
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | mean y: 2380480.5782608697
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | intersect: 14742509194.536577
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | chi2: 0.06402430501735312
[2026-01-10 07:37:38] 2026-01-10 07:37:05,633 | INFO     | current memory leak: -8.34 B/s (using 230 data points, chi2=0.06)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | could have reported an average CPU frequency of 3125 MHz (12 samples)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | ..............................
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . Timing measurements:
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . get job = 0 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . initial setup = 13 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . payload setup = 5 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . stage-in = 0 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . payload execution = 15611 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . stage-out = 17 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | . log creation = 0 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,634 | INFO     | ..............................
[2026-01-10 07:37:38] 2026-01-10 07:37:05,673 | INFO     | 
[2026-01-10 07:37:38] 2026-01-10 07:37:05,673 | INFO     | job summary report
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | --------------------------------------------------
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | PanDA job id: 6963152844
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | task id: 47898826
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | errors: (none)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | pilot state: finished 
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | transexitcode: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | exeerrorcode: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | exeerrordiag: 
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | exitcode: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | exitmsg: OK
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | cpuconsumptiontime: 60950 s
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | nevents: 400
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | neventsw: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | pid: 14752
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | pgrp: 14752
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | corecount: 4
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | event service: False
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | sizes: {0: 2283969, 2: 2284231, 11: 2284259, 15619: 2315427, 15637: 2324423, 15639: 2324479, 15646: 2324801}
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | --------------------------------------------------
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | 
[2026-01-10 07:37:38] 2026-01-10 07:37:05,674 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-01-10 07:37:38] 2026-01-10 07:37:05,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | job 6963152844 has completed (purged errors)
[2026-01-10 07:37:38] 2026-01-10 07:37:05,683 | INFO     | overall cleanup function is called
[2026-01-10 07:37:38] 2026-01-10 07:37:06,059 | INFO     | PID=8351 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 07:37:38] 2026-01-10 07:37:06,689 | INFO     | --- collectZombieJob: --- 10, [14752]
[2026-01-10 07:37:38] 2026-01-10 07:37:06,690 | INFO     | zombie collector waiting for pid 14752
[2026-01-10 07:37:38] 2026-01-10 07:37:06,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:37:38] 2026-01-10 07:37:06,690 | INFO     | collected zombie processes
[2026-01-10 07:37:38] 2026-01-10 07:37:06,690 | INFO     | will attempt to kill all subprocesses of pid=14752
[2026-01-10 07:37:38] 2026-01-10 07:37:06,740 | INFO     | process IDs to be killed: [14752] (in reverse order)
[2026-01-10 07:37:38] 2026-01-10 07:37:06,758 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:37:38] 2026-01-10 07:37:06,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:37:38] 2026-01-10 07:37:06,760 | INFO     | did not find any defunct processes belonging to 14752
[2026-01-10 07:37:38] 2026-01-10 07:37:06,761 | INFO     | did not find any defunct processes belonging to 14752
[2026-01-10 07:37:38] 2026-01-10 07:37:06,761 | INFO     | ready for new job
[2026-01-10 07:37:38] 2026-01-10 07:37:06,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:37:38] 2026-01-10 07:37:06,762 | INFO     | ***************************************
[2026-01-10 07:37:38] 2026-01-10 07:37:06,762 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:37:38] 2026-01-10 07:37:06,762 | INFO     | ***************************************
[2026-01-10 07:37:38] 2026-01-10 07:37:06,762 | INFO     | 
[2026-01-10 07:37:38] 2026-01-10 07:37:06,782 | INFO     | architecture information:
[2026-01-10 07:37:38] 2026-01-10 07:37:06,783 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:37:38] 2026-01-10 07:37:06,790 | INFO     | cat /etc/os-release:
[2026-01-10 07:37:38] NAME="CentOS Linux"
[2026-01-10 07:37:38] VERSION="7 (Core)"
[2026-01-10 07:37:38] ID="centos"
[2026-01-10 07:37:38] ID_LIKE="rhel fedora"
[2026-01-10 07:37:38] VERSION_ID="7"
[2026-01-10 07:37:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:37:38] ANSI_COLOR="0;31"
[2026-01-10 07:37:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:37:38] HOME_URL="https://www.centos.org/"
[2026-01-10 07:37:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:37:38] 
[2026-01-10 07:37:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:37:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:37:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:37:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:37:38] 
[2026-01-10 07:37:38] 2026-01-10 07:37:06,790 | INFO     | ***************************************
[2026-01-10 07:37:38] 2026-01-10 07:37:07,294 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-01-10 07:37:38] 2026-01-10 07:37:07,306 | INFO     | sufficient remaining disk space (417459077120 B)
[2026-01-10 07:37:38] 2026-01-10 07:37:07,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:37:38] 2026-01-10 07:37:07,306 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:37:38] 2026-01-10 07:37:07,307 | INFO     | update_server=False
[2026-01-10 07:37:38] 2026-01-10 07:37:07,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:37:38] 2026-01-10 07:37:07,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:37:38] 2026-01-10 07:37:07,307 | INFO     | aborting loop
[2026-01-10 07:37:38] 2026-01-10 07:37:07,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:37:38] 2026-01-10 07:37:07,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:37:38] 2026-01-10 07:37:07,827 | INFO     | all job control threads have been joined
[2026-01-10 07:37:38] 2026-01-10 07:37:08,312 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,313 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,313 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,384 | INFO     | all data control threads have been joined
[2026-01-10 07:37:38] 2026-01-10 07:37:08,435 | INFO     | all payload control threads have been joined
[2026-01-10 07:37:38] 2026-01-10 07:37:08,475 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,666 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,832 | INFO     | [job] control thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,950 | INFO     | [job] validate thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:08,966 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,019 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,343 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,387 | INFO     | [data] control thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,440 | INFO     | [payload] control thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,586 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,634 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:09,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:37:38] 2026-01-10 07:37:13,871 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:37:38] 2026-01-10 07:37:32,232 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:37:38] 2026-01-10 07:37:33,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260983224128)>', '<ExcThread(monitor, started 140260411438848)>']
[2026-01-10 07:37:38] 2026-01-10 07:37:38,202 | INFO     | PID=8351 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 07:37:38] 2026-01-10 07:37:38,202 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:37:38] 2026-01-10 07:37:38,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:37:38] 2026-01-10 07:37:38,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:37:38] 2026-01-10 07:37:38,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:37:38] 2026-01-10 07:37:38,203 | INFO     | [monitor] control thread has ended
[2026-01-10 07:37:38] 2026-01-10 07:37:38,398 | INFO     | all workflow threads have been joined
[2026-01-10 07:37:38] 2026-01-10 07:37:38,398 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:37:38] 2026-01-10 07:37:38,399 | INFO     | traces error code: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:38,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:37:38] 2026-01-10 07:37:38,492 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:37:38] 2026-01-10 07:37:38,493 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:37:38] 2026-01-10 07:37:38,495 [wrapper] pilotpid: 8351
[2026-01-10 07:37:38] 2026-01-10 07:37:38,496 [wrapper] Pilot exit status: 0
[2026-01-10 07:37:38] 2026-01-10 07:37:38,516 [wrapper] pandaids: 6963152844
[2026-01-10 07:37:38] 2026-01-10 07:37:38,532 [wrapper] cleanup supervisor_pilot  9889 8352
[2026-01-10 07:37:38] 2026-01-10 07:37:38,533 [wrapper] Test setup, not cleaning
[2026-01-10 07:37:38] 2026-01-10 07:37:38,535 [wrapper] apfmon messages muted
[2026-01-10 07:37:38] 2026-01-10 07:37:38,536 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:37:38] 2026-01-10 07:37:38,537 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:37:38]  *** Error codes and diagnostics ***
[2026-01-10 07:37:38]     "exeErrorCode": 0,
[2026-01-10 07:37:38]     "exeErrorDiag": "",
[2026-01-10 07:37:38]     "pilotErrorCode": 0,
[2026-01-10 07:37:38]     "pilotErrorDiag": "",
[2026-01-10 07:37:38]  *** Listing of results directory ***
[2026-01-10 07:37:38] total 436520
[2026-01-10 07:37:38] -rw-r--r-- 1 m m    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-10 07:37:38] -rwx------ 1 m m     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-10 07:37:38] -rw-r--r-- 1 m m      5112 Jan  8 16:09 queuedata.json
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m       100 Jan 10 03:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:37:38] -rwxr-xr-x 1 m m      7986 Jan 10 03:14 run_atlas
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m       105 Jan 10 03:14 job.xml
[2026-01-10 07:37:38] -rw-r--r-- 2 m m 223639001 Jan 10 03:14 EVNT.47898824._001142.pool.root.1
[2026-01-10 07:37:38] -rw-r--r-- 2 m m     15847 Jan 10 03:14 start_atlas.sh
[2026-01-10 07:37:38] drwxrwx--x 2 m m      4096 Jan 10 03:14 shared
[2026-01-10 07:37:38] -rw-r--r-- 2 m m    592395 Jan 10 03:14 input.tar.gz
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m      5877 Jan 10 03:14 init_data.xml
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m         0 Jan 10 03:14 boinc_lockfile
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m      2519 Jan 10 03:15 pandaJob.out
[2026-01-10 07:37:38] -rw------- 1 m m    989382 Jan 10 03:15 agis_schedconf.cvmfs.json
[2026-01-10 07:37:38] drwx------ 5 m m      4096 Jan 10 03:16 pilot3
[2026-01-10 07:37:38] -rw------- 1 m m 214276823 Jan 10 07:36 HITS.47898826._029546.pool.root.1
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m       530 Jan 10 07:36 boinc_task_state.xml
[2026-01-10 07:37:38] -rw------- 1 m m      1030 Jan 10 07:36 memory_monitor_summary.json
[2026-01-10 07:37:38] -rw------- 1 m m        95 Jan 10 07:36 pilot_heartbeat.json
[2026-01-10 07:37:38] -rw------- 1 m m   1516240 Jan 10 07:36 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:37:38] -rw------- 1 m m    426461 Jan 10 07:36 log.47898826._029546.job.log.tgz.1
[2026-01-10 07:37:38] -rw------- 1 m m      7793 Jan 10 07:37 heartbeat.json
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m      8192 Jan 10 07:37 boinc_mmap_file
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m        28 Jan 10 07:37 wrapper_checkpoint.txt
[2026-01-10 07:37:38] -rw------- 1 m m      4745 Jan 10 07:37 pilotlog.txt
[2026-01-10 07:37:38] -rw------- 1 m m   2158114 Jan 10 07:37 log.47898826._029546.job.log.1
[2026-01-10 07:37:38] -rw------- 1 m m       357 Jan 10 07:37 output.list
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m       620 Jan 10 07:37 runtime_log
[2026-01-10 07:37:38] -rw------- 1 m m   2600960 Jan 10 07:37 result.tar.gz
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m      8730 Jan 10 07:37 runtime_log.err
[2026-01-10 07:37:38] -rw------- 1 m m       645 Jan 10 07:37 4NVLDmPi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQ6kKDmrN1Zvn.diag
[2026-01-10 07:37:38] -rw-rw-r-- 1 m m     21056 Jan 10 07:37 stderr.txt
[2026-01-10 07:37:38] HITS file was successfully produced:
[2026-01-10 07:37:38] -rw------- 1 m m 214276823 Jan 10 07:36 shared/HITS.pool.root.1
[2026-01-10 07:37:38]  *** Contents of shared directory: ***
[2026-01-10 07:37:38] total 430800
[2026-01-10 07:37:38] -rw-r--r-- 2 m m 223639001 Jan 10 03:14 ATLAS.root_0
[2026-01-10 07:37:38] -rw-r--r-- 2 m m     15847 Jan 10 03:14 start_atlas.sh
[2026-01-10 07:37:38] -rw-r--r-- 2 m m    592395 Jan 10 03:14 input.tar.gz
[2026-01-10 07:37:38] -rw------- 1 m m 214276823 Jan 10 07:36 HITS.pool.root.1
[2026-01-10 07:37:38] -rw------- 1 m m   2600960 Jan 10 07:37 result.tar.gz
07:37:40 (4039): run_atlas exited; CPU time 61116.734006
07:37:40 (4039): called boinc_finish(0)

</stderr_txt>
]]>

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