Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:19:36 (2189729): wrapper (7.7.26015): starting
21:19:36 (2189729): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 21:19:36] Arguments: --nthreads 10
[2026-01-09 21:19:36] Threads: 10
[2026-01-09 21:19:36] Checking for CVMFS
[2026-01-09 21:19:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:19:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:19:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:19:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:19:39] 2.13.3.0 13693 94239 353560 154964 1 67 28919215 40960000 11549 16776704 0 229985940 99.551 276765193 37838 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:19:39] CVMFS is ok
[2026-01-09 21:19:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:19:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:19:39] Further information can be found at the LHC@home message board.
[2026-01-09 21:19:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:19:39] Checking for apptainer binary...
[2026-01-09 21:19:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:19:39] Running /usr/bin/apptainer --version
[2026-01-09 21:19:40] apptainer version 1.4.5-2.el9
[2026-01-09 21:19:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:19:41] c6-5-37-3.aglt2.org
[2026-01-09 21:19:41] apptainer works
[2026-01-09 21:19:41] Set ATHENA_PROC_NUMBER=10
[2026-01-09 21:19:41] Set ATHENA_CORE_NUMBER=10
[2026-01-09 21:19:41] Starting ATLAS job with PandaID=6962920100
[2026-01-09 21:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:02:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:02:45] 2026-01-10 09:53:21,379 | INFO     | PID=2198724 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 05:02:45] 2026-01-10 09:53:21,379 | INFO     | .. there are 9 such processes running
[2026-01-10 05:02:45] 2026-01-10 09:53:22,380 | INFO     | time since job start (27163s) is within the limit (174528.0s)
[2026-01-10 05:02:45] 2026-01-10 09:53:23,820 | INFO     | monitor loop #1641: job 0:6962920100 is in state 'finished'
[2026-01-10 05:02:45] 2026-01-10 09:53:23,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:02:45] 2026-01-10 09:53:24,389 | INFO     | time since job start (27165s) is within the limit (174528.0s)
[2026-01-10 05:02:45] 2026-01-10 09:53:26,325 | INFO     | monitor loop #1642: job 0:6962920100 is in state 'finished'
[2026-01-10 05:02:45] 2026-01-10 09:53:26,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:02:45] 2026-01-10 09:53:26,413 | INFO     | time since job start (27167s) is within the limit (174528.0s)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,107 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 05:02:45] 2026-01-10 09:53:27,149 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3084.084910714286
[2026-01-10 05:02:45] 2026-01-10 09:53:27,179 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962920100/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,180 | INFO     | extracted standard info from prmon json
[2026-01-10 05:02:45] 2026-01-10 09:53:27,180 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:02:45] 2026-01-10 09:53:27,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:02:45] 2026-01-10 09:53:27,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:02:45] 2026-01-10 09:53:27,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:02:45] 2026-01-10 09:53:27,239 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:02:45] 2026-01-10 09:53:27,239 | INFO     | sum of square deviations: 26958573859.097076
[2026-01-10 05:02:45] 2026-01-10 09:53:27,265 | INFO     | sum of deviations: -104952829370.88257
[2026-01-10 05:02:45] 2026-01-10 09:53:27,265 | INFO     | mean x: 1768025240.9548533
[2026-01-10 05:02:45] 2026-01-10 09:53:27,265 | INFO     | mean y: 2645095.8058690745
[2026-01-10 05:02:45] 2026-01-10 09:53:27,265 | INFO     | intersect: 6885770753.980548
[2026-01-10 05:02:45] 2026-01-10 09:53:27,266 | INFO     | chi2: 3.5107283464818866
[2026-01-10 05:02:45] 2026-01-10 09:53:27,266 | INFO     | sum of square deviations: 26056137994.915485
[2026-01-10 05:02:45] 2026-01-10 09:53:27,291 | INFO     | sum of deviations: -70684031781.4316
[2026-01-10 05:02:45] 2026-01-10 09:53:27,291 | INFO     | mean x: 1768025088.4634702
[2026-01-10 05:02:45] 2026-01-10 09:53:27,292 | INFO     | mean y: 2650835.691780822
[2026-01-10 05:02:45] 2026-01-10 09:53:27,292 | INFO     | intersect: 4798877412.619905
[2026-01-10 05:02:45] 2026-01-10 09:53:27,296 | INFO     | chi2: 2.6408406496634167
[2026-01-10 05:02:45] 2026-01-10 09:53:27,297 | INFO     | current chi2=2.6408406496634167 (change=24.777983682223304 %)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,297 | INFO     | right removable region: 437
[2026-01-10 05:02:45] 2026-01-10 09:53:27,297 | INFO     | sum of square deviations: 26055906986.986374
[2026-01-10 05:02:45] 2026-01-10 09:53:27,305 | INFO     | sum of deviations: -199311958105.71228
[2026-01-10 05:02:45] 2026-01-10 09:53:27,305 | INFO     | mean x: 1768025393.4657533
[2026-01-10 05:02:45] 2026-01-10 09:53:27,305 | INFO     | mean y: 2660976.5525114154
[2026-01-10 05:02:45] 2026-01-10 09:53:27,306 | INFO     | intersect: 13526987852.921936
[2026-01-10 05:02:45] 2026-01-10 09:53:27,306 | INFO     | chi2: 1.4926186110278472
[2026-01-10 05:02:45] 2026-01-10 09:53:27,306 | INFO     | current chi2=1.4926186110278472 (change=57.484075561596626 %)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,307 | INFO     | sum of square deviations: 25173639308.72055
[2026-01-10 05:02:45] 2026-01-10 09:53:27,314 | INFO     | sum of deviations: -207093631778.93765
[2026-01-10 05:02:45] 2026-01-10 09:53:27,315 | INFO     | mean x: 1768025545.9745958
[2026-01-10 05:02:45] 2026-01-10 09:53:27,315 | INFO     | mean y: 2662317.6420323327
[2026-01-10 05:02:45] 2026-01-10 09:53:27,315 | INFO     | intersect: 14547513258.87956
[2026-01-10 05:02:45] 2026-01-10 09:53:27,315 | INFO     | chi2: 1.4577050851686149
[2026-01-10 05:02:45] 2026-01-10 09:53:27,316 | INFO     | current chi2=1.4577050851686149 (change=2.339078824374982 %)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,316 | INFO     | left removable region: 20
[2026-01-10 05:02:45] 2026-01-10 09:53:27,320 | INFO     | sum of square deviations: 22484931317.990448
[2026-01-10 05:02:45] 2026-01-10 09:53:27,324 | INFO     | sum of deviations: -133706557533.88487
[2026-01-10 05:02:45] 2026-01-10 09:53:27,324 | INFO     | mean x: 1768025667.9952037
[2026-01-10 05:02:45] 2026-01-10 09:53:27,324 | INFO     | mean y: 2661388.0575539568
[2026-01-10 05:02:45] 2026-01-10 09:53:27,328 | INFO     | intersect: 10516219217.342197
[2026-01-10 05:02:45] 2026-01-10 09:53:27,329 | INFO     | chi2: 0.506767955170411
[2026-01-10 05:02:45] 2026-01-10 09:53:27,329 | INFO     | current memory leak: -5.95 B/s (using 417 data points, chi2=0.51)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,330 | INFO     | could have reported an average CPU frequency of 3049 MHz (18 samples)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,330 | INFO     | ..............................
[2026-01-10 05:02:45] 2026-01-10 09:53:27,330 | INFO     | . Timing measurements:
[2026-01-10 05:02:45] 2026-01-10 09:53:27,330 | INFO     | . get job = 0 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . initial setup = 3 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . payload setup = 38 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . stage-in = 0 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . payload execution = 27030 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . stage-out = 7 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | . log creation = 2 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,331 | INFO     | ..............................
[2026-01-10 05:02:45] 2026-01-10 09:53:27,554 | INFO     | 
[2026-01-10 05:02:45] 2026-01-10 09:53:27,554 | INFO     | job summary report
[2026-01-10 05:02:45] 2026-01-10 09:53:27,554 | INFO     | --------------------------------------------------
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | PanDA job id: 6962920100
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | task id: 47898826
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | errors: (none)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | pilot state: finished 
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | transexitcode: 0
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | exeerrorcode: 0
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | exeerrordiag: 
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | exitcode: 0
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | exitmsg: OK
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | cpuconsumptiontime: 55574 s
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | nevents: 400
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | neventsw: 0
[2026-01-10 05:02:45] 2026-01-10 09:53:27,555 | INFO     | pid: 2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | pgrp: 2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | corecount: 10
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | event service: False
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | sizes: {0: 2283969, 11: 2283969, 22: 2283997, 26: 2284287, 33: 2284315, 27074: 2321070, 27082: 2330068, 27083: 2330124, 27109: 2330318}
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | --------------------------------------------------
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | 
[2026-01-10 05:02:45] 2026-01-10 09:53:27,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 05:02:45] 2026-01-10 09:53:27,630 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | job 6962920100 has completed (purged errors)
[2026-01-10 05:02:45] 2026-01-10 09:53:27,632 | INFO     | overall cleanup function is called
[2026-01-10 05:02:45] 2026-01-10 09:53:28,644 | INFO     | --- collectZombieJob: --- 10, [2207869]
[2026-01-10 05:02:45] 2026-01-10 09:53:28,644 | INFO     | zombie collector waiting for pid 2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:28,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:02:45] 2026-01-10 09:53:28,645 | INFO     | collected zombie processes
[2026-01-10 05:02:45] 2026-01-10 09:53:28,645 | INFO     | will attempt to kill all subprocesses of pid=2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:29,220 | INFO     | process IDs to be killed: [2207869] (in reverse order)
[2026-01-10 05:02:45] 2026-01-10 09:53:30,429 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:02:45] 2026-01-10 09:53:30,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:02:45] 2026-01-10 09:53:30,592 | INFO     | did not find any defunct processes belonging to 2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:30,780 | INFO     | did not find any defunct processes belonging to 2207869
[2026-01-10 05:02:45] 2026-01-10 09:53:30,780 | INFO     | ready for new job
[2026-01-10 05:02:45] 2026-01-10 09:53:30,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:02:45] 2026-01-10 09:53:30,820 | INFO     | ***************************************
[2026-01-10 05:02:45] 2026-01-10 09:53:30,820 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:02:45] 2026-01-10 09:53:30,820 | INFO     | ***************************************
[2026-01-10 05:02:45] 2026-01-10 09:53:30,820 | INFO     | 
[2026-01-10 05:02:45] 2026-01-10 09:53:30,861 | INFO     | architecture information:
[2026-01-10 05:02:45] 2026-01-10 09:53:30,882 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:02:45] 2026-01-10 09:53:31,093 | INFO     | cat /etc/os-release:
[2026-01-10 05:02:45] NAME="CentOS Linux"
[2026-01-10 05:02:45] VERSION="7 (Core)"
[2026-01-10 05:02:45] ID="centos"
[2026-01-10 05:02:45] ID_LIKE="rhel fedora"
[2026-01-10 05:02:45] VERSION_ID="7"
[2026-01-10 05:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:02:45] ANSI_COLOR="0;31"
[2026-01-10 05:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:02:45] HOME_URL="https://www.centos.org/"
[2026-01-10 05:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:02:45] 
[2026-01-10 05:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:02:45] 
[2026-01-10 05:02:45] 2026-01-10 09:53:31,094 | INFO     | ***************************************
[2026-01-10 05:02:45] 2026-01-10 09:53:31,597 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 05:02:45] 2026-01-10 09:53:31,696 | INFO     | sufficient remaining disk space (72213331968 B)
[2026-01-10 05:02:45] 2026-01-10 09:53:31,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:02:45] 2026-01-10 09:53:31,697 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:02:45] 2026-01-10 09:53:31,697 | INFO     | update_server=False
[2026-01-10 05:02:45] 2026-01-10 09:53:31,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:02:45] 2026-01-10 09:53:31,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:02:45] 2026-01-10 09:53:31,753 | INFO     | all data control threads have been joined
[2026-01-10 05:02:45] 2026-01-10 09:53:32,034 | INFO     | all payload control threads have been joined
[2026-01-10 05:02:45] 2026-01-10 09:53:32,055 | INFO     | all job control threads have been joined
[2026-01-10 05:02:45] 2026-01-10 09:53:32,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:02:45] 2026-01-10 09:53:32,453 | INFO     | aborting loop
[2026-01-10 05:02:45] 2026-01-10 09:53:32,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:02:45] 2026-01-10 09:53:32,746 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:32,754 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:32,759 | INFO     | [data] control thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:32,808 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,040 | INFO     | [payload] control thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,124 | INFO     | [job] control thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,360 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,384 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,495 | INFO     | [job] validate thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,496 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,580 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,595 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,635 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,772 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:53:33,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:02:45] 2026-01-10 09:53:37,964 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:02:45] 2026-01-10 09:54:04,432 | INFO     | PID=2198724 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 05:02:45] 2026-01-10 09:54:04,500 | INFO     | .. there are 9 such processes running
[2026-01-10 05:02:45] 2026-01-10 09:54:04,501 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:02:45] 2026-01-10 09:54:04,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:02:45] 2026-01-10 09:54:04,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:02:45] 2026-01-10 09:54:29,128 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:02:45] 2026-01-10 09:54:30,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611351656256)>', '<ExcThread(monitor, started 140610677745408)>']
[2026-01-10 05:02:45] 2026-01-10 09:54:30,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:02:45] 2026-01-10 09:54:30,805 | INFO     | [monitor] control thread has ended
[2026-01-10 05:02:45] 2026-01-10 09:54:35,097 | INFO     | all workflow threads have been joined
[2026-01-10 05:02:45] 2026-01-10 09:54:35,097 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:02:45] 2026-01-10 09:54:35,098 | INFO     | traces error code: 0
[2026-01-10 05:02:45] 2026-01-10 09:54:35,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:02:45] 2026-01-10 09:54:36,773 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:02:45] 2026-01-10 09:54:36,834 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:02:45] 2026-01-10 09:54:36,893 [wrapper] pilotpid: 2198724
[2026-01-10 05:02:45] 2026-01-10 09:54:36,940 [wrapper] Pilot exit status: 0
[2026-01-10 05:02:45] 2026-01-10 09:54:37,239 [wrapper] pandaids: 6962920100
[2026-01-10 05:02:45] 2026-01-10 09:54:37,755 [wrapper] cleanup supervisor_pilot 3164652 2198725
[2026-01-10 05:02:45] 2026-01-10 09:54:37,799 [wrapper] Test setup, not cleaning
[2026-01-10 05:02:45] 2026-01-10 09:54:37,821 [wrapper] apfmon messages muted
[2026-01-10 05:02:45] 2026-01-10 09:54:37,839 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:02:45] 2026-01-10 09:54:37,854 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:02:45]  *** Error codes and diagnostics ***
[2026-01-10 05:02:45]     "exeErrorCode": 0,
[2026-01-10 05:02:45]     "exeErrorDiag": "",
[2026-01-10 05:02:45]     "pilotErrorCode": 0,
[2026-01-10 05:02:45]     "pilotErrorDiag": "",
[2026-01-10 05:02:45]  *** Listing of results directory ***
[2026-01-10 05:02:45] total 449192
[2026-01-10 05:02:45] -rwx------. 1 boincer umatlas     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:02:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:19 run_atlas
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:19 job.xml
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas 225302480 Jan  9 21:19 EVNT.47898824._000821.pool.root.1
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:19 start_atlas.sh
[2026-01-10 05:02:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:19 shared
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 21:19 input.tar.gz
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:19 boinc_lockfile
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 21:19 pandaJob.out
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas        57 Jan  9 21:19 setup.sh.local
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas    989382 Jan  9 21:20 agis_schedconf.cvmfs.json
[2026-01-10 05:02:45] drwx------. 5 boincer umatlas      4096 Jan  9 21:20 pilot3
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas 222719514 Jan 10 04:51 HITS.47898826._021705.pool.root.1
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas       530 Jan 10 04:52 boinc_task_state.xml
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas      1039 Jan 10 04:52 memory_monitor_summary.json
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:52 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas    635941 Jan 10 04:52 log.47898826._021705.job.log.tgz.1
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas        95 Jan 10 04:53 pilot_heartbeat.json
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas      7822 Jan 10 04:53 heartbeat.json
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas      4823 Jan 10 04:54 pilotlog.txt
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas   3380815 Jan 10 04:54 log.47898826._021705.job.log.1
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas       357 Jan 10 04:54 output.list
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:54 runtime_log
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas   4034560 Jan 10 04:54 result.tar.gz
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas      9350 Jan 10 04:54 runtime_log.err
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas       658 Jan 10 04:54 DQSKDmkE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLmeKDmsuRESo.diag
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas      6844 Jan 10 05:02 init_data.xml
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 05:02 boinc_mmap_file
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas        28 Jan 10 05:02 wrapper_checkpoint.txt
[2026-01-10 05:02:45] -rw-r--r--. 1 boincer umatlas     21506 Jan 10 05:02 stderr.txt
[2026-01-10 05:02:45] HITS file was successfully produced:
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas 222719514 Jan 10 04:51 shared/HITS.pool.root.1
[2026-01-10 05:02:45]  *** Contents of shared directory: ***
[2026-01-10 05:02:45] total 442068
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas 225302480 Jan  9 21:19 ATLAS.root_0
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:19 start_atlas.sh
[2026-01-10 05:02:45] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 21:19 input.tar.gz
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas 222719514 Jan 10 04:51 HITS.pool.root.1
[2026-01-10 05:02:45] -rw-------. 1 boincer umatlas   4034560 Jan 10 04:54 result.tar.gz
05:02:47 (2189729): run_atlas exited; CPU time 56178.716671
05:02:47 (2189729): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN