Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:50:39 (31975): wrapper (7.7.26015): starting
20:50:39 (31975): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 20:50:39] Arguments: --nthreads 12
[2026-01-09 20:50:39] Threads: 12
[2026-01-09 20:50:39] Checking for CVMFS
[2026-01-09 20:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:50:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:50:39] 2.11.2.0 2937 351844 95184 154963 2 1 18508503 20275201 1 130560 1 149513014 99.954 21312879 17053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:50:39] CVMFS is ok
[2026-01-09 20:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:50:39] Further information can be found at the LHC@home message board.
[2026-01-09 20:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:50:39] Checking for apptainer binary...
[2026-01-09 20:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:50:39] Running /usr/bin/apptainer --version
[2026-01-09 20:50:39] apptainer version 1.3.2-1.el7
[2026-01-09 20:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:50:41] c-205-8.aglt2.org
[2026-01-09 20:50:41] apptainer works
[2026-01-09 20:50:41] Set ATHENA_PROC_NUMBER=12
[2026-01-09 20:50:41] Set ATHENA_CORE_NUMBER=12
[2026-01-09 20:50:41] Starting ATLAS job with PandaID=6963197051
[2026-01-09 20:50:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:45:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:45:42] 2026-01-10 05:45:09,793 | INFO     | PID=3396 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 00:45:42] 2026-01-10 05:45:09,986 | INFO     | monitor loop #1054: job 0:6963197051 is in state 'finished'
[2026-01-10 00:45:42] 2026-01-10 05:45:09,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,332 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 00:45:42] 2026-01-10 05:45:10,334 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-10 00:45:42] 2026-01-10 05:45:10,336 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963197051/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,337 | INFO     | extracted standard info from prmon json
[2026-01-10 00:45:42] 2026-01-10 05:45:10,337 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:45:42] 2026-01-10 05:45:10,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:45:42] 2026-01-10 05:45:10,341 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:45:42] 2026-01-10 05:45:10,341 | INFO     | sum of square deviations: 3772761133.2869644
[2026-01-10 00:45:42] 2026-01-10 05:45:10,343 | INFO     | sum of deviations: 83150399573.46097
[2026-01-10 00:45:42] 2026-01-10 05:45:10,343 | INFO     | mean x: 1768016871.730435
[2026-01-10 00:45:42] 2026-01-10 05:45:10,343 | INFO     | mean y: 3219431.9913043478
[2026-01-10 00:45:42] 2026-01-10 05:45:10,343 | INFO     | intersect: -38963283917.486496
[2026-01-10 00:45:42] 2026-01-10 05:45:10,344 | INFO     | chi2: 5.033603463513097
[2026-01-10 00:45:42] 2026-01-10 05:45:10,344 | INFO     | sum of square deviations: 3532037900.515561
[2026-01-10 00:45:42] 2026-01-10 05:45:10,345 | INFO     | sum of deviations: 148922427283.32892
[2026-01-10 00:45:42] 2026-01-10 05:45:10,345 | INFO     | mean x: 1768016719.2355556
[2026-01-10 00:45:42] 2026-01-10 05:45:10,345 | INFO     | mean y: 3260964.408888889
[2026-01-10 00:45:42] 2026-01-10 05:45:10,346 | INFO     | intersect: -74542185240.3541
[2026-01-10 00:45:42] 2026-01-10 05:45:10,346 | INFO     | chi2: 2.9424757234920107
[2026-01-10 00:45:42] 2026-01-10 05:45:10,346 | INFO     | current chi2=2.9424757234920107 (change=41.54335467978297 %)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,346 | INFO     | sum of square deviations: 3301779980.2318335
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | sum of deviations: 172006657813.99994
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | mean x: 1768016566.740909
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | mean y: 3276087.0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | intersect: -92101777073.91156
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | chi2: 2.455530610681942
[2026-01-10 00:45:42] 2026-01-10 05:45:10,348 | INFO     | current chi2=2.455530610681942 (change=16.54882345918498 %)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,349 | INFO     | right removable region: 219
[2026-01-10 00:45:42] 2026-01-10 05:45:10,349 | INFO     | sum of square deviations: 3532005570.515561
[2026-01-10 00:45:42] 2026-01-10 05:45:10,350 | INFO     | sum of deviations: 12453598108.662226
[2026-01-10 00:45:42] 2026-01-10 05:45:10,350 | INFO     | mean x: 1768017024.2355556
[2026-01-10 00:45:42] 2026-01-10 05:45:10,350 | INFO     | mean y: 3263956.742222222
[2026-01-10 00:45:42] 2026-01-10 05:45:10,351 | INFO     | intersect: -6230637159.63925
[2026-01-10 00:45:42] 2026-01-10 05:45:10,351 | INFO     | chi2: 2.6699466433806025
[2026-01-10 00:45:42] 2026-01-10 05:45:10,351 | INFO     | current chi2=2.6699466433806025 (change=46.95754914477968 %)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,351 | INFO     | sum of square deviations: 3301756615.636356
[2026-01-10 00:45:42] 2026-01-10 05:45:10,353 | INFO     | sum of deviations: 869210621.7273388
[2026-01-10 00:45:42] 2026-01-10 05:45:10,353 | INFO     | mean x: 1768017176.7272727
[2026-01-10 00:45:42] 2026-01-10 05:45:10,353 | INFO     | mean y: 3271602.1454545455
[2026-01-10 00:45:42] 2026-01-10 05:45:10,353 | INFO     | intersect: -462171338.7817766
[2026-01-10 00:45:42] 2026-01-10 05:45:10,353 | INFO     | chi2: 2.6345391900147876
[2026-01-10 00:45:42] 2026-01-10 05:45:10,354 | INFO     | current chi2=2.6345391900147876 (change=1.3261483503274452 %)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,354 | INFO     | left removable region: 20
[2026-01-10 00:45:42] 2026-01-10 05:45:10,354 | INFO     | sum of square deviations: 2443654667.899482
[2026-01-10 00:45:42] 2026-01-10 05:45:10,355 | INFO     | sum of deviations: 76676206194.33162
[2026-01-10 00:45:42] 2026-01-10 05:45:10,355 | INFO     | mean x: 1768017146.236181
[2026-01-10 00:45:42] 2026-01-10 05:45:10,355 | INFO     | mean y: 3341855.120603015
[2026-01-10 00:45:42] 2026-01-10 05:45:10,355 | INFO     | intersect: -55472928601.88636
[2026-01-10 00:45:42] 2026-01-10 05:45:10,356 | INFO     | chi2: 0.011630368648017357
[2026-01-10 00:45:42] 2026-01-10 05:45:10,356 | INFO     | current memory leak: 31.38 B/s (using 199 data points, chi2=0.01)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,356 | INFO     | could have reported an average CPU frequency of 2289 MHz (11 samples)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,356 | INFO     | ..............................
[2026-01-10 00:45:42] 2026-01-10 05:45:10,356 | INFO     | . Timing measurements:
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . get job = 0 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . initial setup = 2 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . payload setup = 8 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . stage-in = 0 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . payload execution = 14014 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . stage-out = 2 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | . log creation = 0 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,357 | INFO     | ..............................
[2026-01-10 00:45:42] 2026-01-10 05:45:10,438 | INFO     | 
[2026-01-10 00:45:42] 2026-01-10 05:45:10,438 | INFO     | job summary report
[2026-01-10 00:45:42] 2026-01-10 05:45:10,439 | INFO     | --------------------------------------------------
[2026-01-10 00:45:42] 2026-01-10 05:45:10,439 | INFO     | PanDA job id: 6963197051
[2026-01-10 00:45:42] 2026-01-10 05:45:10,439 | INFO     | task id: 47962010
[2026-01-10 00:45:42] 2026-01-10 05:45:10,439 | INFO     | errors: (none)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | pilot state: finished 
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | transexitcode: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | exeerrorcode: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | exeerrordiag: 
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | exitcode: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | exitmsg: OK
[2026-01-10 00:45:42] 2026-01-10 05:45:10,440 | INFO     | cpuconsumptiontime: 158622 s
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | nevents: 450
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | neventsw: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | pid: 9862
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | pgrp: 9862
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | corecount: 12
[2026-01-10 00:45:42] 2026-01-10 05:45:10,441 | INFO     | event service: False
[2026-01-10 00:45:42] 2026-01-10 05:45:10,442 | INFO     | sizes: {0: 2283792, 1: 2284648, 6: 2284910, 12: 2284938, 14026: 2316619, 14030: 2325797, 14038: 2325987}
[2026-01-10 00:45:42] 2026-01-10 05:45:10,442 | INFO     | --------------------------------------------------
[2026-01-10 00:45:42] 2026-01-10 05:45:10,442 | INFO     | 
[2026-01-10 00:45:42] 2026-01-10 05:45:10,442 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 00:45:42] 2026-01-10 05:45:10,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,467 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:45:42] 2026-01-10 05:45:10,470 | INFO     | job 6963197051 has completed (purged errors)
[2026-01-10 00:45:42] 2026-01-10 05:45:10,471 | INFO     | overall cleanup function is called
[2026-01-10 00:45:42] 2026-01-10 05:45:11,484 | INFO     | --- collectZombieJob: --- 10, [9862]
[2026-01-10 00:45:42] 2026-01-10 05:45:11,484 | INFO     | zombie collector waiting for pid 9862
[2026-01-10 00:45:42] 2026-01-10 05:45:11,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:45:42] 2026-01-10 05:45:11,485 | INFO     | collected zombie processes
[2026-01-10 00:45:42] 2026-01-10 05:45:11,485 | INFO     | will attempt to kill all subprocesses of pid=9862
[2026-01-10 00:45:42] 2026-01-10 05:45:11,575 | INFO     | process IDs to be killed: [9862] (in reverse order)
[2026-01-10 00:45:42] 2026-01-10 05:45:11,624 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:45:42] 2026-01-10 05:45:11,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:45:42] 2026-01-10 05:45:11,628 | INFO     | did not find any defunct processes belonging to 9862
[2026-01-10 00:45:42] 2026-01-10 05:45:11,631 | INFO     | did not find any defunct processes belonging to 9862
[2026-01-10 00:45:42] 2026-01-10 05:45:11,631 | INFO     | ready for new job
[2026-01-10 00:45:42] 2026-01-10 05:45:11,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:45:42] 2026-01-10 05:45:11,633 | INFO     | ***************************************
[2026-01-10 00:45:42] 2026-01-10 05:45:11,633 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:45:42] 2026-01-10 05:45:11,633 | INFO     | ***************************************
[2026-01-10 00:45:42] 2026-01-10 05:45:11,633 | INFO     | 
[2026-01-10 00:45:42] 2026-01-10 05:45:11,633 | INFO     | architecture information:
[2026-01-10 00:45:42] 2026-01-10 05:45:11,634 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:45:42] 2026-01-10 05:45:11,649 | INFO     | cat /etc/os-release:
[2026-01-10 00:45:42] NAME="CentOS Linux"
[2026-01-10 00:45:42] VERSION="7 (Core)"
[2026-01-10 00:45:42] ID="centos"
[2026-01-10 00:45:42] ID_LIKE="rhel fedora"
[2026-01-10 00:45:42] VERSION_ID="7"
[2026-01-10 00:45:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:45:42] ANSI_COLOR="0;31"
[2026-01-10 00:45:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:45:42] HOME_URL="https://www.centos.org/"
[2026-01-10 00:45:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:45:42] 
[2026-01-10 00:45:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:45:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:45:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:45:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:45:42] 
[2026-01-10 00:45:42] 2026-01-10 05:45:11,649 | INFO     | ***************************************
[2026-01-10 00:45:42] 2026-01-10 05:45:12,152 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 00:45:42] 2026-01-10 05:45:12,170 | INFO     | sufficient remaining disk space (28795994112 B)
[2026-01-10 00:45:42] 2026-01-10 05:45:12,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:45:42] 2026-01-10 05:45:12,170 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:45:42] 2026-01-10 05:45:12,170 | INFO     | update_server=False
[2026-01-10 00:45:42] 2026-01-10 05:45:12,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:45:42] 2026-01-10 05:45:12,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:45:42] 2026-01-10 05:45:12,171 | INFO     | all job control threads have been joined
[2026-01-10 00:45:42] 2026-01-10 05:45:12,489 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 00:45:42] 2026-01-10 05:45:12,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 00:45:42] 2026-01-10 05:45:12,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:45:42] 2026-01-10 05:45:12,497 | INFO     | will abort loop
[2026-01-10 00:45:42] 2026-01-10 05:45:12,664 | INFO     | all payload control threads have been joined
[2026-01-10 00:45:42] 2026-01-10 05:45:13,116 | INFO     | all data control threads have been joined
[2026-01-10 00:45:42] 2026-01-10 05:45:13,176 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,177 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,177 | INFO     | [job] control thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:45:42] 2026-01-10 05:45:13,345 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,502 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:45:42] 2026-01-10 05:45:13,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,672 | INFO     | [payload] control thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,768 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,775 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:13,992 | INFO     | [job] validate thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:14,122 | INFO     | [data] control thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:14,128 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:14,751 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:15,197 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:17,639 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:45:42] 2026-01-10 05:45:19,427 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:45:42] 2026-01-10 05:45:20,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226998175552)>', '<ExcThread(monitor, started 140226546607872)>']
[2026-01-10 00:45:42] 2026-01-10 05:45:25,710 | INFO     | all workflow threads have been joined
[2026-01-10 00:45:42] 2026-01-10 05:45:25,710 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:45:42] 2026-01-10 05:45:25,711 | INFO     | traces error code: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:25,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:45:42] 2026-01-10 05:45:41,987 | INFO     | PID=3396 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 00:45:42] 2026-01-10 05:45:41,987 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:45:42] 2026-01-10 05:45:41,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:45:42] 2026-01-10 05:45:41,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:45:42] 2026-01-10 05:45:41,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:45:42] 2026-01-10 05:45:41,988 | INFO     | [monitor] control thread has ended
[2026-01-10 00:45:42] 2026-01-10 05:45:42,095 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:45:42] 2026-01-10 05:45:42,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:45:42] 2026-01-10 05:45:42,103 [wrapper] pilotpid: 3396
[2026-01-10 00:45:42] 2026-01-10 05:45:42,107 [wrapper] Pilot exit status: 0
[2026-01-10 00:45:42] 2026-01-10 05:45:42,120 [wrapper] pandaids: 6963197051
[2026-01-10 00:45:42] 2026-01-10 05:45:42,162 [wrapper] cleanup supervisor_pilot 23619 3397
[2026-01-10 00:45:42] 2026-01-10 05:45:42,166 [wrapper] Test setup, not cleaning
[2026-01-10 00:45:42] 2026-01-10 05:45:42,171 [wrapper] apfmon messages muted
[2026-01-10 00:45:42] 2026-01-10 05:45:42,174 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:45:42] 2026-01-10 05:45:42,178 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:45:42]  *** Error codes and diagnostics ***
[2026-01-10 00:45:42]     "exeErrorCode": 0,
[2026-01-10 00:45:42]     "exeErrorDiag": "",
[2026-01-10 00:45:42]     "pilotErrorCode": 0,
[2026-01-10 00:45:42]     "pilotErrorDiag": "",
[2026-01-10 00:45:42]  *** Listing of results directory ***
[2026-01-10 00:45:42] total 781164
[2026-01-10 00:45:42] -rwx------ 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas       100 Jan  9 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:45:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 20:50 run_atlas
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas       105 Jan  9 20:50 job.xml
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas 392826066 Jan  9 20:50 EVNT.47962006._000063.pool.root.1
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:50 start_atlas.sh
[2026-01-10 00:45:42] drwxrwx--x 2 boincer umatlas      4096 Jan  9 20:50 shared
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas    592613 Jan  9 20:50 input.tar.gz
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas         0 Jan  9 20:50 boinc_lockfile
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas      2891 Jan  9 20:50 pandaJob.out
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas        57 Jan  9 20:50 setup.sh.local
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas    989382 Jan  9 20:50 agis_schedconf.cvmfs.json
[2026-01-10 00:45:42] drwx------ 5 boincer umatlas      4096 Jan  9 20:50 pilot3
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas       533 Jan 10 00:36 boinc_task_state.xml
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas      5954 Jan 10 00:36 init_data.xml
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas 395474270 Jan 10 00:44 HITS.47962010._000724.pool.root.1
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas        95 Jan 10 00:44 pilot_heartbeat.json
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas      1058 Jan 10 00:44 memory_monitor_summary.json
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas   1516240 Jan 10 00:45 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas   1867044 Jan 10 00:45 log.47962010._000724.job.log.tgz.1
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 00:45 boinc_mmap_file
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas        29 Jan 10 00:45 wrapper_checkpoint.txt
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas      8664 Jan 10 00:45 heartbeat.json
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas       744 Jan 10 00:45 pilotlog.txt
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas   1981086 Jan 10 00:45 log.47962010._000724.job.log.1
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas       353 Jan 10 00:45 output.list
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas       620 Jan 10 00:45 runtime_log
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas   3870720 Jan 10 00:45 result.tar.gz
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas      9340 Jan 10 00:45 runtime_log.err
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas       668 Jan 10 00:45 OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn.diag
[2026-01-10 00:45:42] -rw-r--r-- 1 boincer umatlas     21283 Jan 10 00:45 stderr.txt
[2026-01-10 00:45:42] HITS file was successfully produced:
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas 395474270 Jan 10 00:44 shared/HITS.pool.root.1
[2026-01-10 00:45:42]  *** Contents of shared directory: ***
[2026-01-10 00:45:42] total 774208
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas 392826066 Jan  9 20:50 ATLAS.root_0
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:50 start_atlas.sh
[2026-01-10 00:45:42] -rw-r--r-- 2 boincer umatlas    592613 Jan  9 20:50 input.tar.gz
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas 395474270 Jan 10 00:44 HITS.pool.root.1
[2026-01-10 00:45:42] -rw------- 1 boincer umatlas   3870720 Jan 10 00:45 result.tar.gz
00:45:43 (31975): run_atlas exited; CPU time 156032.482121
00:45:43 (31975): called boinc_finish(0)

</stderr_txt>
]]>

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