Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:19:49 (11641): wrapper (7.7.26015): starting
20:19:49 (11641): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:19:49] Arguments: --nthreads 8
[2026-01-09 20:19:49] Threads: 8
[2026-01-09 20:19:49] Checking for CVMFS
[2026-01-09 20:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:19:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:19:50] 2.11.2.0 2822 137430 82640 154963 1 1 14764660 20275201 1 130560 0 34817174 99.823 8790419 30717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:19:50] CVMFS is ok
[2026-01-09 20:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:19:50] Further information can be found at the LHC@home message board.
[2026-01-09 20:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:19:50] Checking for apptainer binary...
[2026-01-09 20:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:19:50] Running /usr/bin/apptainer --version
[2026-01-09 20:19:50] apptainer version 1.3.2-1.el7
[2026-01-09 20:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:19:51] c-204-37.aglt2.org
[2026-01-09 20:19:51] apptainer works
[2026-01-09 20:19:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:19:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:19:51] Starting ATLAS job with PandaID=6963381641
[2026-01-09 20:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:48:39]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:48:39] 2026-01-10 14:47:45,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:48:39] 2026-01-10 14:47:46,383 | INFO     | time since job start (48452s) is within the limit (349056.0s)
[2026-01-10 09:48:39] 2026-01-10 14:47:47,646 | INFO     | monitor loop #3517: job 0:6963381641 is in state 'finished'
[2026-01-10 09:48:39] 2026-01-10 14:47:47,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,389 | INFO     | time since job start (48454s) is within the limit (349056.0s)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,611 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:48:39] 2026-01-10 14:47:48,614 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-10 09:48:39] 2026-01-10 14:47:48,616 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963381641/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,617 | INFO     | extracted standard info from prmon json
[2026-01-10 09:48:39] 2026-01-10 14:47:48,617 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:48:39] 2026-01-10 14:47:48,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:48:39] 2026-01-10 14:47:48,630 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:48:39] 2026-01-10 14:47:48,631 | INFO     | sum of square deviations: 155217494644.76068
[2026-01-10 09:48:39] 2026-01-10 14:47:48,644 | INFO     | sum of deviations: 898603777930.7716
[2026-01-10 09:48:39] 2026-01-10 14:47:48,644 | INFO     | mean x: 1768032244.138539
[2026-01-10 09:48:39] 2026-01-10 14:47:48,644 | INFO     | mean y: 2847770.474811083
[2026-01-10 09:48:39] 2026-01-10 14:47:48,644 | INFO     | intersect: -10232857023.771715
[2026-01-10 09:48:39] 2026-01-10 14:47:48,645 | INFO     | chi2: 6.030110632329168
[2026-01-10 09:48:39] 2026-01-10 14:47:48,646 | INFO     | sum of square deviations: 152303762085.209
[2026-01-10 09:48:39] 2026-01-10 14:47:48,659 | INFO     | sum of deviations: 1140916897429.8335
[2026-01-10 09:48:39] 2026-01-10 14:47:48,659 | INFO     | mean x: 1768032091.6425855
[2026-01-10 09:48:39] 2026-01-10 14:47:48,659 | INFO     | mean y: 2860443.2192648924
[2026-01-10 09:48:39] 2026-01-10 14:47:48,659 | INFO     | intersect: -13241577257.700375
[2026-01-10 09:48:39] 2026-01-10 14:47:48,660 | INFO     | chi2: 3.269279216813712
[2026-01-10 09:48:39] 2026-01-10 14:47:48,660 | INFO     | current chi2=3.269279216813712 (change=45.784092263810884 %)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,661 | INFO     | sum of square deviations: 149426727888.13113
[2026-01-10 09:48:39] 2026-01-10 14:47:48,674 | INFO     | sum of deviations: 1226865207400.6836
[2026-01-10 09:48:39] 2026-01-10 14:47:48,674 | INFO     | mean x: 1768031939.1466837
[2026-01-10 09:48:39] 2026-01-10 14:47:48,674 | INFO     | mean y: 2864997.8201530613
[2026-01-10 09:48:39] 2026-01-10 14:47:48,674 | INFO     | intersect: -14513526429.39601
[2026-01-10 09:48:39] 2026-01-10 14:47:48,675 | INFO     | chi2: 2.8344155147237076
[2026-01-10 09:48:39] 2026-01-10 14:47:48,675 | INFO     | current chi2=2.8344155147237076 (change=13.301516121765488 %)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,675 | INFO     | right removable region: 783
[2026-01-10 09:48:39] 2026-01-10 14:47:48,676 | INFO     | sum of square deviations: 152303452815.209
[2026-01-10 09:48:39] 2026-01-10 14:47:48,689 | INFO     | sum of deviations: 657662322515.2201
[2026-01-10 09:48:39] 2026-01-10 14:47:48,689 | INFO     | mean x: 1768032396.6425855
[2026-01-10 09:48:39] 2026-01-10 14:47:48,689 | INFO     | mean y: 2860369.362484157
[2026-01-10 09:48:39] 2026-01-10 14:47:48,689 | INFO     | intersect: -7631689411.126798
[2026-01-10 09:48:39] 2026-01-10 14:47:48,690 | INFO     | chi2: 3.530305134535068
[2026-01-10 09:48:39] 2026-01-10 14:47:48,690 | INFO     | current chi2=3.530305134535068 (change=41.45538366065657 %)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,691 | INFO     | sum of square deviations: 149426205240.7121
[2026-01-10 09:48:39] 2026-01-10 14:47:48,704 | INFO     | sum of deviations: 605856026351.2095
[2026-01-10 09:48:39] 2026-01-10 14:47:48,704 | INFO     | mean x: 1768032549.1441326
[2026-01-10 09:48:39] 2026-01-10 14:47:48,704 | INFO     | mean y: 2863114.2193877553
[2026-01-10 09:48:39] 2026-01-10 14:47:48,704 | INFO     | intersect: -7165713327.633636
[2026-01-10 09:48:39] 2026-01-10 14:47:48,705 | INFO     | chi2: 3.4669955467076266
[2026-01-10 09:48:39] 2026-01-10 14:47:48,705 | INFO     | current chi2=3.4669955467076266 (change=1.7933177279243582 %)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,705 | INFO     | left removable region: 20
[2026-01-10 09:48:39] 2026-01-10 14:47:48,706 | INFO     | sum of square deviations: 137737776304.346
[2026-01-10 09:48:39] 2026-01-10 14:47:48,718 | INFO     | sum of deviations: 886404657873.8451
[2026-01-10 09:48:39] 2026-01-10 14:47:48,718 | INFO     | mean x: 1768032518.655308
[2026-01-10 09:48:39] 2026-01-10 14:47:48,718 | INFO     | mean y: 2884938.1743119266
[2026-01-10 09:48:39] 2026-01-10 14:47:48,718 | INFO     | intersect: -11375201029.654991
[2026-01-10 09:48:39] 2026-01-10 14:47:48,719 | INFO     | chi2: 0.1729343265729787
[2026-01-10 09:48:39] 2026-01-10 14:47:48,719 | INFO     | current memory leak: 6.44 B/s (using 763 data points, chi2=0.17)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,720 | INFO     | could have reported an average CPU frequency of 2183 MHz (30 samples)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,720 | INFO     | ..............................
[2026-01-10 09:48:39] 2026-01-10 14:47:48,720 | INFO     | . Timing measurements:
[2026-01-10 09:48:39] 2026-01-10 14:47:48,720 | INFO     | . get job = 0 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,720 | INFO     | . initial setup = 2 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | . payload setup = 15 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | . stage-in = 0 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | . payload execution = 48400 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | . stage-out = 3 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | . log creation = 0 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,721 | INFO     | ..............................
[2026-01-10 09:48:39] 2026-01-10 14:47:48,808 | INFO     | 
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | job summary report
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | --------------------------------------------------
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | PanDA job id: 6963381641
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | task id: 47962010
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | errors: (none)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:48:39] 2026-01-10 14:47:48,809 | INFO     | pilot state: finished 
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | transexitcode: 0
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | exeerrorcode: 0
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | exeerrordiag: 
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | exitcode: 0
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | exitmsg: OK
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | cpuconsumptiontime: 376372 s
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | nevents: 900
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | neventsw: 0
[2026-01-10 09:48:39] 2026-01-10 14:47:48,810 | INFO     | pid: 23376
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | pgrp: 23376
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | corecount: 8
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | event service: False
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | sizes: {0: 2284624, 8: 2284886, 11: 2284914, 48419: 2332632, 48424: 2341626, 48427: 2341682, 48435: 2342056}
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | --------------------------------------------------
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | 
[2026-01-10 09:48:39] 2026-01-10 14:47:48,811 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:48:39] 2026-01-10 14:47:48,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:48:39] 2026-01-10 14:47:48,842 | INFO     | job 6963381641 has completed (purged errors)
[2026-01-10 09:48:39] 2026-01-10 14:47:48,842 | INFO     | overall cleanup function is called
[2026-01-10 09:48:39] 2026-01-10 14:47:49,857 | INFO     | --- collectZombieJob: --- 10, [23376]
[2026-01-10 09:48:39] 2026-01-10 14:47:49,857 | INFO     | zombie collector waiting for pid 23376
[2026-01-10 09:48:39] 2026-01-10 14:47:49,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:48:39] 2026-01-10 14:47:49,858 | INFO     | collected zombie processes
[2026-01-10 09:48:39] 2026-01-10 14:47:49,858 | INFO     | will attempt to kill all subprocesses of pid=23376
[2026-01-10 09:48:39] 2026-01-10 14:47:49,946 | INFO     | process IDs to be killed: [23376] (in reverse order)
[2026-01-10 09:48:39] 2026-01-10 14:47:50,002 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:48:39] 2026-01-10 14:47:50,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:48:39] 2026-01-10 14:47:50,007 | INFO     | did not find any defunct processes belonging to 23376
[2026-01-10 09:48:39] 2026-01-10 14:47:50,010 | INFO     | did not find any defunct processes belonging to 23376
[2026-01-10 09:48:39] 2026-01-10 14:47:50,010 | INFO     | ready for new job
[2026-01-10 09:48:39] 2026-01-10 14:47:50,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:48:39] 2026-01-10 14:47:50,014 | INFO     | ***************************************
[2026-01-10 09:48:39] 2026-01-10 14:47:50,014 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:48:39] 2026-01-10 14:47:50,014 | INFO     | ***************************************
[2026-01-10 09:48:39] 2026-01-10 14:47:50,014 | INFO     | 
[2026-01-10 09:48:39] 2026-01-10 14:47:50,015 | INFO     | architecture information:
[2026-01-10 09:48:39] 2026-01-10 14:47:50,015 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:48:39] 2026-01-10 14:47:50,034 | INFO     | cat /etc/os-release:
[2026-01-10 09:48:39] NAME="CentOS Linux"
[2026-01-10 09:48:39] VERSION="7 (Core)"
[2026-01-10 09:48:39] ID="centos"
[2026-01-10 09:48:39] ID_LIKE="rhel fedora"
[2026-01-10 09:48:39] VERSION_ID="7"
[2026-01-10 09:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:48:39] ANSI_COLOR="0;31"
[2026-01-10 09:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:48:39] HOME_URL="https://www.centos.org/"
[2026-01-10 09:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:48:39] 
[2026-01-10 09:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:48:39] 
[2026-01-10 09:48:39] 2026-01-10 14:47:50,034 | INFO     | ***************************************
[2026-01-10 09:48:39] 2026-01-10 14:47:50,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:48:39] 2026-01-10 14:47:50,557 | INFO     | sufficient remaining disk space (17585668096 B)
[2026-01-10 09:48:39] 2026-01-10 14:47:50,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:48:39] 2026-01-10 14:47:50,558 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:48:39] 2026-01-10 14:47:50,558 | INFO     | update_server=False
[2026-01-10 09:48:39] 2026-01-10 14:47:50,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:48:39] 2026-01-10 14:47:50,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:48:39] 2026-01-10 14:47:50,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:48:39] 2026-01-10 14:47:51,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:48:39] 2026-01-10 14:47:51,159 | INFO     | aborting loop
[2026-01-10 09:48:39] 2026-01-10 14:47:51,564 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:51,565 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:51,585 | INFO     | all data control threads have been joined
[2026-01-10 09:48:39] 2026-01-10 14:47:51,598 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:51,658 | INFO     | all job control threads have been joined
[2026-01-10 09:48:39] 2026-01-10 14:47:51,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:48:39] 2026-01-10 14:47:51,806 | INFO     | all payload control threads have been joined
[2026-01-10 09:48:39] 2026-01-10 14:47:51,847 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,165 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,588 | INFO     | [data] control thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,664 | INFO     | [job] control thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,692 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,693 | INFO     | [job] validate thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,738 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,769 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,809 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,810 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:52,810 | INFO     | [payload] control thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:47:55,787 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:48:39] 2026-01-10 14:48:21,608 | INFO     | PID=16739 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:48:39] 2026-01-10 14:48:21,609 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:48:39] 2026-01-10 14:48:21,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:48:39] 2026-01-10 14:48:21,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:48:39] 2026-01-10 14:48:34,003 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:48:39] 2026-01-10 14:48:34,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157506119488)>', '<ExcThread(monitor, started 140156770174720)>']
[2026-01-10 09:48:39] 2026-01-10 14:48:34,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:48:39] 2026-01-10 14:48:34,674 | INFO     | [monitor] control thread has ended
[2026-01-10 09:48:39] 2026-01-10 14:48:39,242 | INFO     | all workflow threads have been joined
[2026-01-10 09:48:39] 2026-01-10 14:48:39,242 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:48:39] 2026-01-10 14:48:39,248 | INFO     | traces error code: 0
[2026-01-10 09:48:39] 2026-01-10 14:48:39,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:48:39] 2026-01-10 14:48:39,349 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:48:39] 2026-01-10 14:48:39,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:48:39] 2026-01-10 14:48:39,359 [wrapper] pilotpid: 16739
[2026-01-10 09:48:39] 2026-01-10 14:48:39,364 [wrapper] Pilot exit status: 0
[2026-01-10 09:48:39] 2026-01-10 14:48:39,381 [wrapper] pandaids: 6963381641
[2026-01-10 09:48:39] 2026-01-10 14:48:39,433 [wrapper] cleanup supervisor_pilot  4285 16740
[2026-01-10 09:48:39] 2026-01-10 14:48:39,439 [wrapper] Test setup, not cleaning
[2026-01-10 09:48:39] 2026-01-10 14:48:39,444 [wrapper] apfmon messages muted
[2026-01-10 09:48:39] 2026-01-10 14:48:39,449 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:48:39] 2026-01-10 14:48:39,453 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:48:39]  *** Error codes and diagnostics ***
[2026-01-10 09:48:39]     "exeErrorCode": 0,
[2026-01-10 09:48:39]     "exeErrorDiag": "",
[2026-01-10 09:48:39]     "pilotErrorCode": 0,
[2026-01-10 09:48:39]     "pilotErrorDiag": "",
[2026-01-10 09:48:39]  *** Listing of results directory ***
[2026-01-10 09:48:39] total 1179668
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 09:48:39] -rwx------ 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas       100 Jan  9 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:48:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 20:19 run_atlas
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas       105 Jan  9 20:19 job.xml
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas 392678259 Jan  9 20:19 EVNT.47962006._000117.pool.root.1
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:19 start_atlas.sh
[2026-01-10 09:48:39] drwxrwx--x 2 boincer umatlas      4096 Jan  9 20:19 shared
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas    592621 Jan  9 20:19 input.tar.gz
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas         0 Jan  9 20:19 boinc_lockfile
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas      2893 Jan  9 20:19 pandaJob.out
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas        57 Jan  9 20:19 setup.sh.local
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas    989382 Jan  9 20:20 agis_schedconf.cvmfs.json
[2026-01-10 09:48:39] drwx------ 5 boincer umatlas      4096 Jan  9 20:20 pilot3
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas       532 Jan 10 09:33 boinc_task_state.xml
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas      5912 Jan 10 09:46 init_data.xml
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas 794176608 Jan 10 09:46 HITS.47962010._001701.pool.root.1
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas      1062 Jan 10 09:47 memory_monitor_summary.json
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas   1516240 Jan 10 09:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas   2000767 Jan 10 09:47 log.47962010._001701.job.log.tgz.1
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas      8653 Jan 10 09:47 heartbeat.json
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas        95 Jan 10 09:48 pilot_heartbeat.json
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:48 boinc_mmap_file
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas        29 Jan 10 09:48 wrapper_checkpoint.txt
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas      4746 Jan 10 09:48 pilotlog.txt
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas   6601254 Jan 10 09:48 log.47962010._001701.job.log.1
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas       353 Jan 10 09:48 output.list
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:48 runtime_log
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas   8622080 Jan 10 09:48 result.tar.gz
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 09:48 runtime_log.err
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas       668 Jan 10 09:48 avTNDmTtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfLhKDmCaO3Vm.diag
[2026-01-10 09:48:39] -rw-r--r-- 1 boincer umatlas     21214 Jan 10 09:48 stderr.txt
[2026-01-10 09:48:39] HITS file was successfully produced:
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas 794176608 Jan 10 09:46 shared/HITS.pool.root.1
[2026-01-10 09:48:39]  *** Contents of shared directory: ***
[2026-01-10 09:48:39] total 1168064
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas 392678259 Jan  9 20:19 ATLAS.root_0
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:19 start_atlas.sh
[2026-01-10 09:48:39] -rw-r--r-- 2 boincer umatlas    592621 Jan  9 20:19 input.tar.gz
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas 794176608 Jan 10 09:46 HITS.pool.root.1
[2026-01-10 09:48:39] -rw------- 1 boincer umatlas   8622080 Jan 10 09:48 result.tar.gz
09:48:41 (11641): run_atlas exited; CPU time 373546.620341
09:48:41 (11641): called boinc_finish(0)

</stderr_txt>
]]>

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