Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:52 (3365730): wrapper (7.7.26015): starting
20:16:52 (3365730): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:16:52] Arguments: --nthreads 8
[2026-01-09 20:16:52] Threads: 8
[2026-01-09 20:16:52] Checking for CVMFS
[2026-01-09 20:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:16:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:16:54] 2.13.3.0 12942 39740 472500 154962 1 285 23118332 32935937 58616 16776704 0 415746826 99.770 233193943 28956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:16:54] CVMFS is ok
[2026-01-09 20:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:16:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:16:54] Further information can be found at the LHC@home message board.
[2026-01-09 20:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:16:54] Checking for apptainer binary...
[2026-01-09 20:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:16:54] Running /usr/bin/apptainer --version
[2026-01-09 20:16:54] apptainer version 1.4.5-2.el9
[2026-01-09 20:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:16:55] lc-10-9.aglt2.org
[2026-01-09 20:16:55] apptainer works
[2026-01-09 20:16:55] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:16:55] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:16:55] Starting ATLAS job with PandaID=6963165563
[2026-01-09 20:16:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:02:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:02:32] 2026-01-10 05:01:30,446 | INFO     | monitor loop #767: job 0:6963165563 is in state 'finished'
[2026-01-10 00:02:32] 2026-01-10 05:01:30,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:02:32] 2026-01-10 05:01:30,897 | INFO     | time since job start (13409s) is within the limit (349056.0s)
[2026-01-10 00:02:32] 2026-01-10 05:01:32,909 | INFO     | time since job start (13411s) is within the limit (349056.0s)
[2026-01-10 00:02:32] 2026-01-10 05:01:32,909 | INFO     | 13418s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 00:02:32] 2026-01-10 05:01:32,956 | INFO     | monitor loop #768: job 0:6963165563 is in state 'finished'
[2026-01-10 00:02:32] 2026-01-10 05:01:32,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:02:32] 2026-01-10 05:01:34,945 | INFO     | time since job start (13413s) is within the limit (349056.0s)
[2026-01-10 00:02:32] 2026-01-10 05:01:34,985 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 00:02:32] 2026-01-10 05:01:34,998 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2942.5710208333326
[2026-01-10 00:02:32] 2026-01-10 05:01:35,066 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963165563/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,067 | INFO     | extracted standard info from prmon json
[2026-01-10 00:02:32] 2026-01-10 05:01:35,067 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:02:32] 2026-01-10 05:01:35,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:02:32] 2026-01-10 05:01:35,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:02:32] 2026-01-10 05:01:35,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:02:32] 2026-01-10 05:01:35,073 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:02:32] 2026-01-10 05:01:35,073 | INFO     | sum of square deviations: 3212403757.8394527
[2026-01-10 00:02:32] 2026-01-10 05:01:35,075 | INFO     | sum of deviations: -51759754936.30277
[2026-01-10 00:02:32] 2026-01-10 05:01:35,075 | INFO     | mean x: 1768014634.5550458
[2026-01-10 00:02:32] 2026-01-10 05:01:35,075 | INFO     | mean y: 2563564.2752293576
[2026-01-10 00:02:32] 2026-01-10 05:01:35,075 | INFO     | intersect: 28489643989.655434
[2026-01-10 00:02:32] 2026-01-10 05:01:35,075 | INFO     | chi2: 2.851474230341845
[2026-01-10 00:02:32] 2026-01-10 05:01:35,076 | INFO     | sum of square deviations: 2996394065.323952
[2026-01-10 00:02:32] 2026-01-10 05:01:35,077 | INFO     | sum of deviations: -36468565802.52111
[2026-01-10 00:02:32] 2026-01-10 05:01:35,077 | INFO     | mean x: 1768014482.056338
[2026-01-10 00:02:32] 2026-01-10 05:01:35,077 | INFO     | mean y: 2574179.79342723
[2026-01-10 00:02:32] 2026-01-10 05:01:35,078 | INFO     | intersect: 21520756058.754993
[2026-01-10 00:02:32] 2026-01-10 05:01:35,078 | INFO     | chi2: 2.1787371608370356
[2026-01-10 00:02:32] 2026-01-10 05:01:35,078 | INFO     | current chi2=2.1787371608370356 (change=23.59260561945038 %)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,078 | INFO     | right removable region: 212
[2026-01-10 00:02:32] 2026-01-10 05:01:35,078 | INFO     | sum of square deviations: 2996386745.323952
[2026-01-10 00:02:32] 2026-01-10 05:01:35,080 | INFO     | sum of deviations: -91249308715.0282
[2026-01-10 00:02:32] 2026-01-10 05:01:35,080 | INFO     | mean x: 1768014787.056338
[2026-01-10 00:02:32] 2026-01-10 05:01:35,080 | INFO     | mean y: 2591207.835680751
[2026-01-10 00:02:32] 2026-01-10 05:01:35,080 | INFO     | intersect: 53844147999.06242
[2026-01-10 00:02:32] 2026-01-10 05:01:35,081 | INFO     | chi2: 1.1282384404037706
[2026-01-10 00:02:32] 2026-01-10 05:01:35,081 | INFO     | current chi2=1.1282384404037706 (change=60.433153194987376 %)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,081 | INFO     | sum of square deviations: 2790289887.4182825
[2026-01-10 00:02:32] 2026-01-10 05:01:35,082 | INFO     | sum of deviations: -92521176433.40869
[2026-01-10 00:02:32] 2026-01-10 05:01:35,082 | INFO     | mean x: 1768014939.5528846
[2026-01-10 00:02:32] 2026-01-10 05:01:35,082 | INFO     | mean y: 2592105.264423077
[2026-01-10 00:02:32] 2026-01-10 05:01:35,082 | INFO     | intersect: 58626903112.113335
[2026-01-10 00:02:32] 2026-01-10 05:01:35,082 | INFO     | chi2: 1.0825449350873786
[2026-01-10 00:02:32] 2026-01-10 05:01:35,083 | INFO     | current chi2=1.0825449350873786 (change=4.049986570218206 %)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,083 | INFO     | left removable region: 20
[2026-01-10 00:02:32] 2026-01-10 05:01:35,083 | INFO     | sum of square deviations: 2194626411.479172
[2026-01-10 00:02:32] 2026-01-10 05:01:35,084 | INFO     | sum of deviations: -60794560319.7292
[2026-01-10 00:02:32] 2026-01-10 05:01:35,084 | INFO     | mean x: 1768015061.5520833
[2026-01-10 00:02:32] 2026-01-10 05:01:35,084 | INFO     | mean y: 2590933.0729166665
[2026-01-10 00:02:32] 2026-01-10 05:01:35,084 | INFO     | intersect: 48979354241.627464
[2026-01-10 00:02:32] 2026-01-10 05:01:35,085 | INFO     | chi2: 0.3687338207304857
[2026-01-10 00:02:32] 2026-01-10 05:01:35,085 | INFO     | current memory leak: -27.70 B/s (using 192 data points, chi2=0.37)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,085 | INFO     | could have reported an average CPU frequency of 2945 MHz (11 samples)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | ..............................
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . Timing measurements:
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . get job = 0 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . initial setup = 7 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . payload setup = 35 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . stage-in = 0 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . payload execution = 13277 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . stage-out = 4 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | . log creation = 0 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,086 | INFO     | ..............................
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | 
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | job summary report
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | --------------------------------------------------
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | PanDA job id: 6963165563
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | task id: 47898826
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | errors: (none)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | pilot state: finished 
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | transexitcode: 0
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | exeerrorcode: 0
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | exeerrordiag: 
[2026-01-10 00:02:32] 2026-01-10 05:01:35,474 | INFO     | exitcode: 0
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | exitmsg: OK
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | cpuconsumptiontime: 57483 s
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | nevents: 400
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | neventsw: 0
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | pid: 3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | pgrp: 3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | corecount: 8
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | event service: False
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 32: 2284317, 34: 2284345, 13317: 2314414, 13322: 2323412, 13326: 2323468, 13344: 2323662}
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | --------------------------------------------------
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | 
[2026-01-10 00:02:32] 2026-01-10 05:01:35,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,581 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:02:32] 2026-01-10 05:01:35,582 | INFO     | job 6963165563 has completed (purged errors)
[2026-01-10 00:02:32] 2026-01-10 05:01:35,582 | INFO     | overall cleanup function is called
[2026-01-10 00:02:32] 2026-01-10 05:01:36,603 | INFO     | --- collectZombieJob: --- 10, [3403038]
[2026-01-10 00:02:32] 2026-01-10 05:01:36,603 | INFO     | zombie collector waiting for pid 3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:36,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:02:32] 2026-01-10 05:01:36,603 | INFO     | collected zombie processes
[2026-01-10 00:02:32] 2026-01-10 05:01:36,603 | INFO     | will attempt to kill all subprocesses of pid=3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:38,776 | INFO     | process IDs to be killed: [3403038] (in reverse order)
[2026-01-10 00:02:32] 2026-01-10 05:01:39,125 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:02:32] 2026-01-10 05:01:39,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:02:32] 2026-01-10 05:01:39,156 | INFO     | did not find any defunct processes belonging to 3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:39,183 | INFO     | did not find any defunct processes belonging to 3403038
[2026-01-10 00:02:32] 2026-01-10 05:01:39,184 | INFO     | ready for new job
[2026-01-10 00:02:32] 2026-01-10 05:01:39,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:02:32] 2026-01-10 05:01:39,186 | INFO     | ***************************************
[2026-01-10 00:02:32] 2026-01-10 05:01:39,186 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:02:32] 2026-01-10 05:01:39,186 | INFO     | ***************************************
[2026-01-10 00:02:32] 2026-01-10 05:01:39,186 | INFO     | 
[2026-01-10 00:02:32] 2026-01-10 05:01:39,191 | INFO     | architecture information:
[2026-01-10 00:02:32] 2026-01-10 05:01:39,191 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:02:32] 2026-01-10 05:01:39,221 | INFO     | cat /etc/os-release:
[2026-01-10 00:02:32] NAME="CentOS Linux"
[2026-01-10 00:02:32] VERSION="7 (Core)"
[2026-01-10 00:02:32] ID="centos"
[2026-01-10 00:02:32] ID_LIKE="rhel fedora"
[2026-01-10 00:02:32] VERSION_ID="7"
[2026-01-10 00:02:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:02:32] ANSI_COLOR="0;31"
[2026-01-10 00:02:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:02:32] HOME_URL="https://www.centos.org/"
[2026-01-10 00:02:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:02:32] 
[2026-01-10 00:02:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:02:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:02:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:02:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:02:32] 
[2026-01-10 00:02:32] 2026-01-10 05:01:39,225 | INFO     | ***************************************
[2026-01-10 00:02:32] 2026-01-10 05:01:39,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 00:02:32] 2026-01-10 05:01:39,801 | INFO     | sufficient remaining disk space (95906955264 B)
[2026-01-10 00:02:32] 2026-01-10 05:01:39,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:02:32] 2026-01-10 05:01:39,806 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:02:32] 2026-01-10 05:01:39,806 | INFO     | update_server=False
[2026-01-10 00:02:32] 2026-01-10 05:01:39,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:02:32] 2026-01-10 05:01:39,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:02:32] 2026-01-10 05:01:39,807 | INFO     | aborting loop
[2026-01-10 00:02:32] 2026-01-10 05:01:39,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:02:32] 2026-01-10 05:01:40,325 | INFO     | all payload control threads have been joined
[2026-01-10 00:02:32] 2026-01-10 05:01:40,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:02:32] 2026-01-10 05:01:40,661 | INFO     | all data control threads have been joined
[2026-01-10 00:02:32] 2026-01-10 05:01:40,812 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:40,813 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:40,914 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:40,975 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:41,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:02:32] 2026-01-10 05:01:41,331 | INFO     | [payload] control thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:41,469 | INFO     | all job control threads have been joined
[2026-01-10 00:02:32] 2026-01-10 05:01:41,501 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:41,667 | INFO     | [data] control thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:41,679 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:41,814 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:42,097 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:42,101 | INFO     | [job] validate thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:42,105 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:42,213 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:42,475 | INFO     | [job] control thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:45,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:01:50,267 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:02:32] 2026-01-10 05:01:51,273 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:02:32] 2026-01-10 05:02:08,832 | INFO     | PID=3380779 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:02:32] 2026-01-10 05:02:08,833 | INFO     | .. there are 94 such processes running
[2026-01-10 00:02:32] 2026-01-10 05:02:08,833 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:02:32] 2026-01-10 05:02:08,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:02:32] 2026-01-10 05:02:08,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:02:32] 2026-01-10 05:02:25,318 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:02:32] 2026-01-10 05:02:26,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035127277376)>', '<ExcThread(monitor, started 140034749474560)>']
[2026-01-10 00:02:32] 2026-01-10 05:02:26,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:02:32] 2026-01-10 05:02:26,973 | INFO     | [monitor] control thread has ended
[2026-01-10 00:02:32] 2026-01-10 05:02:31,212 | INFO     | all workflow threads have been joined
[2026-01-10 00:02:32] 2026-01-10 05:02:31,212 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:02:32] 2026-01-10 05:02:31,212 | INFO     | traces error code: 0
[2026-01-10 00:02:32] 2026-01-10 05:02:31,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:02:32] 2026-01-10 05:02:31,706 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:02:32] 2026-01-10 05:02:31,735 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:02:32] 2026-01-10 05:02:31,751 [wrapper] pilotpid: 3380779
[2026-01-10 00:02:32] 2026-01-10 05:02:31,774 [wrapper] Pilot exit status: 0
[2026-01-10 00:02:32] 2026-01-10 05:02:31,885 [wrapper] pandaids: 6963165563
[2026-01-10 00:02:32] 2026-01-10 05:02:32,337 [wrapper] cleanup supervisor_pilot 1170882 3380780
[2026-01-10 00:02:32] 2026-01-10 05:02:32,347 [wrapper] Test setup, not cleaning
[2026-01-10 00:02:32] 2026-01-10 05:02:32,365 [wrapper] apfmon messages muted
[2026-01-10 00:02:32] 2026-01-10 05:02:32,392 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:02:32] 2026-01-10 05:02:32,419 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:02:32]  *** Error codes and diagnostics ***
[2026-01-10 00:02:32]     "exeErrorCode": 0,
[2026-01-10 00:02:32]     "exeErrorDiag": "",
[2026-01-10 00:02:32]     "pilotErrorCode": 0,
[2026-01-10 00:02:32]     "pilotErrorDiag": "",
[2026-01-10 00:02:32]  *** Listing of results directory ***
[2026-01-10 00:02:32] total 435692
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-10 00:02:32] -rwx------. 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:02:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:16 run_atlas
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:16 job.xml
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas 222510343 Jan  9 20:16 EVNT.47898824._001347.pool.root.1
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:16 start_atlas.sh
[2026-01-10 00:02:32] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:16 shared
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 20:16 input.tar.gz
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:16 boinc_lockfile
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 20:16 pandaJob.out
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas        57 Jan  9 20:16 setup.sh.local
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas    989374 Jan  9 20:17 agis_schedconf.cvmfs.json
[2026-01-10 00:02:32] drwx------. 5 boincer umatlas      4096 Jan  9 20:18 pilot3
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas      6864 Jan  9 23:57 init_data.xml
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas 215626556 Jan 10 00:00 HITS.47898826._034782.pool.root.1
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas       530 Jan 10 00:00 boinc_task_state.xml
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas      1048 Jan 10 00:01 memory_monitor_summary.json
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas    429357 Jan 10 00:01 log.47898826._034782.job.log.tgz.1
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas      7830 Jan 10 00:01 heartbeat.json
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas        95 Jan 10 00:02 pilot_heartbeat.json
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:02 boinc_mmap_file
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:02 wrapper_checkpoint.txt
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas      4896 Jan 10 00:02 pilotlog.txt
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas   1616508 Jan 10 00:02 log.47898826._034782.job.log.1
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas       357 Jan 10 00:02 output.list
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:02 runtime_log
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas   2068480 Jan 10 00:02 result.tar.gz
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:02 runtime_log.err
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas       656 Jan 10 00:02 px8KDmB1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4jgKDmm2u8Yn.diag
[2026-01-10 00:02:32] -rw-r--r--. 1 boincer umatlas     21413 Jan 10 00:02 stderr.txt
[2026-01-10 00:02:32] HITS file was successfully produced:
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas 215626556 Jan 10 00:00 shared/HITS.pool.root.1
[2026-01-10 00:02:32]  *** Contents of shared directory: ***
[2026-01-10 00:02:32] total 430496
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas 222510343 Jan  9 20:16 ATLAS.root_0
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:16 start_atlas.sh
[2026-01-10 00:02:32] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 20:16 input.tar.gz
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas 215626556 Jan 10 00:00 HITS.pool.root.1
[2026-01-10 00:02:32] -rw-------. 1 boincer umatlas   2068480 Jan 10 00:02 result.tar.gz
00:02:34 (3365730): run_atlas exited; CPU time 58342.226211
00:02:34 (3365730): called boinc_finish(0)

</stderr_txt>
]]>

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