Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:31:11 (4005948): wrapper (7.7.26015): starting
21:31:11 (4005948): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:31:11] Arguments: --nthreads 8
[2026-01-09 21:31:11] Threads: 8
[2026-01-09 21:31:11] Checking for CVMFS
[2026-01-09 21:31:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:31:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:31:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:31:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:31:16] 2.13.3.0 13037 30920 287484 154964 1 106 26738186 32935937 19883 16776704 0 29451788 99.608 28963428 13768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:31:16] CVMFS is ok
[2026-01-09 21:31:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:31:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:31:16] Further information can be found at the LHC@home message board.
[2026-01-09 21:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:31:16] Checking for apptainer binary...
[2026-01-09 21:31:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:31:16] Running /usr/bin/apptainer --version
[2026-01-09 21:31:16] apptainer version 1.4.5-2.el9
[2026-01-09 21:31:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:31:18] c6-12-25-3.aglt2.org
[2026-01-09 21:31:18] apptainer works
[2026-01-09 21:31:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:31:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:31:18] Starting ATLAS job with PandaID=6963338576
[2026-01-09 21:31:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:56:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:56:03] 2026-01-10 17:55:07,656 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 12:56:03] 2026-01-10 17:55:07,804 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 1000.0004583333334
[2026-01-10 12:56:03] 2026-01-10 17:55:08,095 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963338576/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:56:03] 2026-01-10 17:55:08,096 | INFO     | extracted standard info from prmon json
[2026-01-10 12:56:03] 2026-01-10 17:55:08,097 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:56:03] 2026-01-10 17:55:08,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:56:03] 2026-01-10 17:55:08,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:56:03] 2026-01-10 17:55:08,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:56:03] 2026-01-10 17:55:08,228 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:56:03] 2026-01-10 17:55:08,236 | INFO     | sum of square deviations: 227560733940.43484
[2026-01-10 12:56:03] 2026-01-10 17:55:08,398 | INFO     | sum of deviations: 288957136391.7123
[2026-01-10 12:56:03] 2026-01-10 17:55:08,398 | INFO     | mean x: 1768040099.534368
[2026-01-10 12:56:03] 2026-01-10 17:55:08,398 | INFO     | mean y: 2476083.8802660755
[2026-01-10 12:56:03] 2026-01-10 17:55:08,403 | INFO     | intersect: -2242585246.959422
[2026-01-10 12:56:03] 2026-01-10 17:55:08,406 | INFO     | chi2: 10.411969700493321
[2026-01-10 12:56:03] 2026-01-10 17:55:08,413 | INFO     | sum of square deviations: 223797902654.2163
[2026-01-10 12:56:03] 2026-01-10 17:55:08,557 | INFO     | sum of deviations: 570484911341.9542
[2026-01-10 12:56:03] 2026-01-10 17:55:08,557 | INFO     | mean x: 1768039947.044593
[2026-01-10 12:56:03] 2026-01-10 17:55:08,558 | INFO     | mean y: 2487493.001114827
[2026-01-10 12:56:03] 2026-01-10 17:55:08,558 | INFO     | intersect: -4504436390.004121
[2026-01-10 12:56:03] 2026-01-10 17:55:08,565 | INFO     | chi2: 6.934549618448463
[2026-01-10 12:56:03] 2026-01-10 17:55:08,565 | INFO     | current chi2=6.934549618448463 (change=33.39829236998354 %)
[2026-01-10 12:56:03] 2026-01-10 17:55:08,571 | INFO     | sum of square deviations: 220076574710.72943
[2026-01-10 12:56:03] 2026-01-10 17:55:08,729 | INFO     | sum of deviations: 681701843750.3711
[2026-01-10 12:56:03] 2026-01-10 17:55:08,730 | INFO     | mean x: 1768039794.5504484
[2026-01-10 12:56:03] 2026-01-10 17:55:08,730 | INFO     | mean y: 2492034.569506726
[2026-01-10 12:56:03] 2026-01-10 17:55:08,731 | INFO     | intersect: -5474128952.254253
[2026-01-10 12:56:03] 2026-01-10 17:55:08,738 | INFO     | chi2: 5.476066099351738
[2026-01-10 12:56:03] 2026-01-10 17:55:08,738 | INFO     | current chi2=5.476066099351738 (change=21.03213040997818 %)
[2026-01-10 12:56:03] 2026-01-10 17:55:08,738 | INFO     | right removable region: 891
[2026-01-10 12:56:03] 2026-01-10 17:55:08,745 | INFO     | sum of square deviations: 223797058055.4737
[2026-01-10 12:56:03] 2026-01-10 17:55:08,925 | INFO     | sum of deviations: 7640715057.814186
[2026-01-10 12:56:03] 2026-01-10 17:55:08,926 | INFO     | mean x: 1768040252.0412486
[2026-01-10 12:56:03] 2026-01-10 17:55:08,926 | INFO     | mean y: 2487477.950947603
[2026-01-10 12:56:03] 2026-01-10 17:55:08,926 | INFO     | intersect: -57875655.92565854
[2026-01-10 12:56:03] 2026-01-10 17:55:08,933 | INFO     | chi2: 6.899661255733874
[2026-01-10 12:56:03] 2026-01-10 17:55:08,934 | INFO     | current chi2=6.899661255733874 (change=33.733371742265376 %)
[2026-01-10 12:56:03] 2026-01-10 17:55:08,941 | INFO     | sum of square deviations: 220075050016.82938
[2026-01-10 12:56:03] 2026-01-10 17:55:09,088 | INFO     | sum of deviations: -167260502089.74655
[2026-01-10 12:56:03] 2026-01-10 17:55:09,089 | INFO     | mean x: 1768040404.5493274
[2026-01-10 12:56:03] 2026-01-10 17:55:09,089 | INFO     | mean y: 2494641.505605381
[2026-01-10 12:56:03] 2026-01-10 17:55:09,089 | INFO     | intersect: 1346233178.6876478
[2026-01-10 12:56:03] 2026-01-10 17:55:09,096 | INFO     | chi2: 5.5694871187870305
[2026-01-10 12:56:03] 2026-01-10 17:55:09,097 | INFO     | current chi2=5.5694871187870305 (change=19.27883250560192 %)
[2026-01-10 12:56:03] 2026-01-10 17:55:09,097 | INFO     | left removable region: 20
[2026-01-10 12:56:03] 2026-01-10 17:55:09,104 | INFO     | sum of square deviations: 204895114512.14664
[2026-01-10 12:56:03] 2026-01-10 17:55:09,249 | INFO     | sum of deviations: 102046534641.88043
[2026-01-10 12:56:03] 2026-01-10 17:55:09,250 | INFO     | mean x: 1768040374.074627
[2026-01-10 12:56:03] 2026-01-10 17:55:09,250 | INFO     | mean y: 2516249.1710677384
[2026-01-10 12:56:03] 2026-01-10 17:55:09,251 | INFO     | intersect: -878043512.8849174
[2026-01-10 12:56:03] 2026-01-10 17:55:09,258 | INFO     | chi2: 0.15180907636528132
[2026-01-10 12:56:03] 2026-01-10 17:55:09,258 | INFO     | current memory leak: 0.50 B/s (using 871 data points, chi2=0.15)
[2026-01-10 12:56:03] 2026-01-10 17:55:09,264 | INFO     | could have reported an average CPU frequency of 999 MHz (33 samples)
[2026-01-10 12:56:03] 2026-01-10 17:55:09,265 | INFO     | ..............................
[2026-01-10 12:56:03] 2026-01-10 17:55:09,265 | INFO     | . Timing measurements:
[2026-01-10 12:56:03] 2026-01-10 17:55:09,265 | INFO     | . get job = 1 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,266 | INFO     | . initial setup = 12 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,266 | INFO     | . payload setup = 67 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,266 | INFO     | . stage-in = 1 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,266 | INFO     | . payload execution = 55068 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,266 | INFO     | . stage-out = 15 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,267 | INFO     | . log creation = 4 s
[2026-01-10 12:56:03] 2026-01-10 17:55:09,267 | INFO     | ..............................
[2026-01-10 12:56:03] 2026-01-10 17:55:11,962 | INFO     | 
[2026-01-10 12:56:03] 2026-01-10 17:55:11,962 | INFO     | job summary report
[2026-01-10 12:56:03] 2026-01-10 17:55:11,962 | INFO     | --------------------------------------------------
[2026-01-10 12:56:03] 2026-01-10 17:55:11,963 | INFO     | PanDA job id: 6963338576
[2026-01-10 12:56:03] 2026-01-10 17:55:11,963 | INFO     | task id: 47898826
[2026-01-10 12:56:03] 2026-01-10 17:55:11,963 | INFO     | errors: (none)
[2026-01-10 12:56:03] 2026-01-10 17:55:11,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:56:03] 2026-01-10 17:55:11,963 | INFO     | pilot state: finished 
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | transexitcode: 0
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | exeerrorcode: 0
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | exeerrordiag: 
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | exitcode: 0
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | exitmsg: OK
[2026-01-10 12:56:03] 2026-01-10 17:55:11,964 | INFO     | cpuconsumptiontime: 158184 s
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | nevents: 400
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | neventsw: 0
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | pid: 4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | pgrp: 4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | corecount: 8
[2026-01-10 12:56:03] 2026-01-10 17:55:11,965 | INFO     | event service: False
[2026-01-10 12:56:03] 2026-01-10 17:55:11,966 | INFO     | sizes: {0: 2283091, 2: 2283692, 3: 2283776, 6: 2283804, 7: 2284031, 8: 2284031, 19: 2284187, 31: 2284215, 42: 2284243, 54: 2284299, 61: 2284589, 67: 2284897, 55141
[2026-01-10 12:56:03] 2026-01-10 17:55:11,966 | INFO     | --------------------------------------------------
[2026-01-10 12:56:03] 2026-01-10 17:55:11,966 | INFO     | 
[2026-01-10 12:56:03] 2026-01-10 17:55:11,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 12:56:03] 2026-01-10 17:55:12,132 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,133 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,133 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,133 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,136 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:56:03] 2026-01-10 17:55:12,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,136 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:56:03] 2026-01-10 17:55:12,137 | INFO     | job 6963338576 has completed (purged errors)
[2026-01-10 12:56:03] 2026-01-10 17:55:12,137 | INFO     | overall cleanup function is called
[2026-01-10 12:56:03] 2026-01-10 17:55:12,658 | INFO     | PID=4016700 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:56:03] 2026-01-10 17:55:12,659 | INFO     | .. there are 17 such processes running
[2026-01-10 12:56:03] 2026-01-10 17:55:13,169 | INFO     | --- collectZombieJob: --- 10, [4034124]
[2026-01-10 12:56:03] 2026-01-10 17:55:13,169 | INFO     | zombie collector waiting for pid 4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:13,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:56:03] 2026-01-10 17:55:13,170 | INFO     | collected zombie processes
[2026-01-10 12:56:03] 2026-01-10 17:55:13,170 | INFO     | will attempt to kill all subprocesses of pid=4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:17,037 | INFO     | process IDs to be killed: [4034124] (in reverse order)
[2026-01-10 12:56:03] 2026-01-10 17:55:18,494 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:56:03] 2026-01-10 17:55:18,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:56:03] 2026-01-10 17:55:18,839 | INFO     | did not find any defunct processes belonging to 4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:19,041 | INFO     | did not find any defunct processes belonging to 4034124
[2026-01-10 12:56:03] 2026-01-10 17:55:19,041 | INFO     | ready for new job
[2026-01-10 12:56:03] 2026-01-10 17:55:19,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:56:03] 2026-01-10 17:55:19,092 | INFO     | ***************************************
[2026-01-10 12:56:03] 2026-01-10 17:55:19,092 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:56:03] 2026-01-10 17:55:19,092 | INFO     | ***************************************
[2026-01-10 12:56:03] 2026-01-10 17:55:19,093 | INFO     | 
[2026-01-10 12:56:03] 2026-01-10 17:55:19,193 | INFO     | architecture information:
[2026-01-10 12:56:03] 2026-01-10 17:55:19,216 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:56:03] 2026-01-10 17:55:19,422 | INFO     | cat /etc/os-release:
[2026-01-10 12:56:03] NAME="CentOS Linux"
[2026-01-10 12:56:03] VERSION="7 (Core)"
[2026-01-10 12:56:03] ID="centos"
[2026-01-10 12:56:03] ID_LIKE="rhel fedora"
[2026-01-10 12:56:03] VERSION_ID="7"
[2026-01-10 12:56:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:56:03] ANSI_COLOR="0;31"
[2026-01-10 12:56:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:56:03] HOME_URL="https://www.centos.org/"
[2026-01-10 12:56:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:56:03] 
[2026-01-10 12:56:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:56:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:56:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:56:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:56:03] 
[2026-01-10 12:56:03] 2026-01-10 17:55:19,423 | INFO     | ***************************************
[2026-01-10 12:56:03] 2026-01-10 17:55:19,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 12:56:03] 2026-01-10 17:55:20,010 | INFO     | sufficient remaining disk space (94262788096 B)
[2026-01-10 12:56:03] 2026-01-10 17:55:20,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:56:03] 2026-01-10 17:55:20,012 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:56:03] 2026-01-10 17:55:20,012 | INFO     | update_server=False
[2026-01-10 12:56:03] 2026-01-10 17:55:20,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:56:03] 2026-01-10 17:55:20,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:56:03] 2026-01-10 17:55:20,847 | INFO     | aborting loop
[2026-01-10 12:56:03] 2026-01-10 17:55:20,854 | INFO     | all data control threads have been joined
[2026-01-10 12:56:03] 2026-01-10 17:55:21,019 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:56:03] 2026-01-10 17:55:21,080 | INFO     | all payload control threads have been joined
[2026-01-10 12:56:03] 2026-01-10 17:55:21,160 | INFO     | all job control threads have been joined
[2026-01-10 12:56:03] 2026-01-10 17:55:21,323 | INFO     | [job] validate thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,333 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,365 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,372 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,409 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,413 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:56:03] 2026-01-10 17:55:21,860 | INFO     | [data] control thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,865 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:21,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:56:03] 2026-01-10 17:55:22,073 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:22,086 | INFO     | [payload] control thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:22,166 | INFO     | [job] control thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:22,527 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:23,456 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:25,947 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:56:03] 2026-01-10 17:55:52,395 | INFO     | PID=4016700 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:56:04] 2026-01-10 17:55:52,395 | INFO     | .. there are 17 such processes running
[2026-01-10 12:56:04] 2026-01-10 17:55:52,396 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:56:04] 2026-01-10 17:55:52,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:56:04] 2026-01-10 17:55:52,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:56:04] 2026-01-10 17:55:54,754 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:56:04] 2026-01-10 17:55:54,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794166269760)>', '<ExcThread(monitor, started 139793795114752)>']
[2026-01-10 12:56:04] 2026-01-10 17:55:55,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:56:04] 2026-01-10 17:55:55,419 | INFO     | [monitor] control thread has ended
[2026-01-10 12:56:04] 2026-01-10 17:55:59,925 | INFO     | all workflow threads have been joined
[2026-01-10 12:56:04] 2026-01-10 17:55:59,925 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:56:04] 2026-01-10 17:55:59,926 | INFO     | traces error code: 0
[2026-01-10 12:56:04] 2026-01-10 17:55:59,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:56:04] 2026-01-10 17:56:01,752 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:56:04] 2026-01-10 17:56:01,827 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:56:04] 2026-01-10 17:56:01,848 [wrapper] pilotpid: 4016700
[2026-01-10 12:56:04] 2026-01-10 17:56:01,863 [wrapper] Pilot exit status: 0
[2026-01-10 12:56:04] 2026-01-10 17:56:02,066 [wrapper] pandaids: 6963338576
[2026-01-10 12:56:04] 2026-01-10 17:56:02,772 [wrapper] cleanup supervisor_pilot 1781978 4016702
[2026-01-10 12:56:04] 2026-01-10 17:56:02,793 [wrapper] Test setup, not cleaning
[2026-01-10 12:56:04] 2026-01-10 17:56:02,810 [wrapper] apfmon messages muted
[2026-01-10 12:56:04] 2026-01-10 17:56:02,838 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:56:04] 2026-01-10 17:56:02,872 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:56:04]  *** Error codes and diagnostics ***
[2026-01-10 12:56:04]     "exeErrorCode": 0,
[2026-01-10 12:56:04]     "exeErrorDiag": "",
[2026-01-10 12:56:04]     "pilotErrorCode": 0,
[2026-01-10 12:56:04]     "pilotErrorDiag": "",
[2026-01-10 12:56:04]  *** Listing of results directory ***
[2026-01-10 12:56:04] total 455264
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 12:56:04] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:56:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:31 run_atlas
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:31 job.xml
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas 225502966 Jan  9 21:31 EVNT.47898824._000846.pool.root.1
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:31 start_atlas.sh
[2026-01-10 12:56:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:31 shared
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 21:31 input.tar.gz
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:31 boinc_lockfile
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 21:31 pandaJob.out
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas        57 Jan  9 21:31 setup.sh.local
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas    989382 Jan  9 21:33 agis_schedconf.cvmfs.json
[2026-01-10 12:56:04] drwx------. 5 boincer umatlas      4096 Jan  9 21:33 pilot3
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas      6859 Jan 10 12:45 init_data.xml
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas 223913961 Jan 10 12:45 HITS.47898826._039521.pool.root.1
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas       532 Jan 10 12:46 boinc_task_state.xml
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas      1036 Jan 10 12:53 memory_monitor_summary.json
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 12:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas    892601 Jan 10 12:54 log.47898826._039521.job.log.tgz.1
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas        95 Jan 10 12:54 pilot_heartbeat.json
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas      7831 Jan 10 12:55 heartbeat.json
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 12:55 boinc_mmap_file
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas        29 Jan 10 12:55 wrapper_checkpoint.txt
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas      4824 Jan 10 12:55 pilotlog.txt
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas   5536702 Jan 10 12:56 log.47898826._039521.job.log.1
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas       357 Jan 10 12:56 output.list
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 12:56 runtime_log
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas   6451200 Jan 10 12:56 result.tar.gz
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 12:56 runtime_log.err
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas       662 Jan 10 12:56 hBwLDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmM2gKDmB0xdtn.diag
[2026-01-10 12:56:04] -rw-r--r--. 1 boincer umatlas     21304 Jan 10 12:56 stderr.txt
[2026-01-10 12:56:04] HITS file was successfully produced:
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas 223913961 Jan 10 12:45 shared/HITS.pool.root.1
[2026-01-10 12:56:04]  *** Contents of shared directory: ***
[2026-01-10 12:56:04] total 445788
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas 225502966 Jan  9 21:31 ATLAS.root_0
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:31 start_atlas.sh
[2026-01-10 12:56:04] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 21:31 input.tar.gz
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas 223913961 Jan 10 12:45 HITS.pool.root.1
[2026-01-10 12:56:04] -rw-------. 1 boincer umatlas   6451200 Jan 10 12:56 result.tar.gz
12:56:06 (4005948): run_atlas exited; CPU time 162362.077008
12:56:06 (4005948): called boinc_finish(0)

</stderr_txt>
]]>

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