Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:36:44 (3292971): wrapper (7.7.26015): starting
21:36:44 (3292971): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 21:36:44] Arguments: --nthreads 9
[2026-01-09 21:36:44] Threads: 9
[2026-01-09 21:36:44] Checking for CVMFS
[2026-01-09 21:36:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:36:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:36:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:36:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:36:45] 2.13.3.0 11338 94124 201060 154964 1 107 29648752 32935937 22434 16776704 0 508462343 99.483 707587228 38138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:36:45] CVMFS is ok
[2026-01-09 21:36:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:36:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:36:45] Further information can be found at the LHC@home message board.
[2026-01-09 21:36:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:36:45] Checking for apptainer binary...
[2026-01-09 21:36:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:36:45] Running /usr/bin/apptainer --version
[2026-01-09 21:36:45] apptainer version 1.4.5-2.el9
[2026-01-09 21:36:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:36:45] c7-3-17.aglt2.org
[2026-01-09 21:36:45] apptainer works
[2026-01-09 21:36:45] Set ATHENA_PROC_NUMBER=9
[2026-01-09 21:36:45] Set ATHENA_CORE_NUMBER=9
[2026-01-09 21:36:46] Starting ATLAS job with PandaID=6964539107
[2026-01-09 21:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:30:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:30:03] 2026-01-10 05:29:25,827 | INFO     | executing command: lscpu
[2026-01-10 00:30:03] 2026-01-10 05:29:25,890 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 00:30:03] 2026-01-10 05:29:27,391 | INFO     | time since job start (10326s) is within the limit (349056.0s)
[2026-01-10 00:30:03] 2026-01-10 05:29:29,037 | WARNING  | process 3304315 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 00:30:03] 2026-01-10 05:29:29,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539107/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:30:03] 2026-01-10 05:29:29,399 | INFO     | time since job start (10328s) is within the limit (349056.0s)
[2026-01-10 00:30:03] 2026-01-10 05:29:29,625 | INFO     | number of running child processes to parent process 3304315: 1
[2026-01-10 00:30:03] 2026-01-10 05:29:29,625 | INFO     | maximum number of monitored processes: 6
[2026-01-10 00:30:03] 2026-01-10 05:29:30,773 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:30:03] 2026-01-10 05:29:30,779 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3279.183260416666
[2026-01-10 00:30:03] 2026-01-10 05:29:30,794 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539107/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,794 | INFO     | extracted standard info from prmon json
[2026-01-10 00:30:03] 2026-01-10 05:29:30,794 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:30:03] 2026-01-10 05:29:30,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:30:03] 2026-01-10 05:29:30,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:30:03] 2026-01-10 05:29:30,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:30:03] 2026-01-10 05:29:30,797 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:30:03] 2026-01-10 05:29:30,798 | INFO     | sum of square deviations: 1470157419.375
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | sum of deviations: -5010123168.499994
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | mean x: 1768017813.625
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | mean y: 2572355.738095238
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | intersect: 6027768633.106178
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | chi2: 1.8239330410661234
[2026-01-10 00:30:03] 2026-01-10 05:29:30,799 | INFO     | sum of square deviations: 1342756784.294474
[2026-01-10 00:30:03] 2026-01-10 05:29:30,800 | INFO     | sum of deviations: -4815643588.3681
[2026-01-10 00:30:03] 2026-01-10 05:29:30,800 | INFO     | mean x: 1768017661.1288342
[2026-01-10 00:30:03] 2026-01-10 05:29:30,800 | INFO     | mean y: 2572588.588957055
[2026-01-10 00:30:03] 2026-01-10 05:29:30,800 | INFO     | intersect: 6343365659.62172
[2026-01-10 00:30:03] 2026-01-10 05:29:30,800 | INFO     | chi2: 1.823095139418411
[2026-01-10 00:30:03] 2026-01-10 05:29:30,801 | INFO     | current chi2=1.823095139418411 (change=0.04593927676329059 %)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,801 | INFO     | right removable region: 162
[2026-01-10 00:30:03] 2026-01-10 05:29:30,801 | INFO     | sum of square deviations: 1342743974.294474
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | sum of deviations: -31257946950.736187
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | mean x: 1768017966.1288342
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | mean y: 2603344.1779141105
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | intersect: 41160570053.53635
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | chi2: 0.287225349136093
[2026-01-10 00:30:03] 2026-01-10 05:29:30,802 | INFO     | current chi2=0.287225349136093 (change=84.25241811682932 %)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,803 | INFO     | sum of square deviations: 1222921764.9683614
[2026-01-10 00:30:03] 2026-01-10 05:29:30,803 | INFO     | sum of deviations: -27944918692.810135
[2026-01-10 00:30:03] 2026-01-10 05:29:30,803 | INFO     | mean x: 1768018118.6265824
[2026-01-10 00:30:03] 2026-01-10 05:29:30,803 | INFO     | mean y: 2599052.240506329
[2026-01-10 00:30:03] 2026-01-10 05:29:30,804 | INFO     | intersect: 40403484855.19555
[2026-01-10 00:30:03] 2026-01-10 05:29:30,804 | INFO     | chi2: 0.27121666210907797
[2026-01-10 00:30:03] 2026-01-10 05:29:30,804 | INFO     | current chi2=0.27121666210907797 (change=5.573563432045754 %)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,804 | INFO     | left removable region: 20
[2026-01-10 00:30:03] 2026-01-10 05:29:30,804 | INFO     | sum of square deviations: 887742683.4647901
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | sum of deviations: -12665266616.591549
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | mean x: 1768018240.6197183
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | mean y: 2578674.7112676054
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | intersect: 25226579747.91637
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | chi2: 0.19654105383058876
[2026-01-10 00:30:03] 2026-01-10 05:29:30,805 | INFO     | current memory leak: -14.27 B/s (using 142 data points, chi2=0.20)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | could have reported an average CPU frequency of 3210 MHz (9 samples)
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | ..............................
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | . Timing measurements:
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | . get job = 0 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | . initial setup = 4 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | . payload setup = 24 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,806 | INFO     | . stage-in = 0 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,807 | INFO     | . payload execution = 10258 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,807 | INFO     | . stage-out = 0 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,807 | INFO     | . log creation = 0 s
[2026-01-10 00:30:03] 2026-01-10 05:29:30,807 | INFO     | ..............................
[2026-01-10 00:30:03] 2026-01-10 05:29:31,254 | INFO     | 
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | job summary report
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | --------------------------------------------------
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | PanDA job id: 6964539107
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | task id: 47898826
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | errors: (none)
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | pilot state: finished 
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | transexitcode: 0
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | exeerrorcode: 0
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | exeerrordiag: 
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | exitcode: 0
[2026-01-10 00:30:03] 2026-01-10 05:29:31,256 | INFO     | exitmsg: OK
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | cpuconsumptiontime: 46060 s
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | nevents: 400
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | neventsw: 0
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | pid: 3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | pgrp: 3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | corecount: 9
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | event service: False
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | sizes: {0: 2283918, 1: 2283918, 11: 2283946, 15: 2284236, 22: 2284264, 10287: 2313303, 10289: 2322301, 10290: 2322357, 10295: 2322615}
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | --------------------------------------------------
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | 
[2026-01-10 00:30:03] 2026-01-10 05:29:31,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 00:30:03] 2026-01-10 05:29:31,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,276 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | job 6964539107 has completed (purged errors)
[2026-01-10 00:30:03] 2026-01-10 05:29:31,278 | INFO     | overall cleanup function is called
[2026-01-10 00:30:03] 2026-01-10 05:29:32,286 | INFO     | --- collectZombieJob: --- 10, [3304315]
[2026-01-10 00:30:03] 2026-01-10 05:29:32,287 | INFO     | zombie collector waiting for pid 3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:32,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:30:03] 2026-01-10 05:29:32,287 | INFO     | collected zombie processes
[2026-01-10 00:30:03] 2026-01-10 05:29:32,287 | INFO     | will attempt to kill all subprocesses of pid=3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:32,742 | INFO     | process IDs to be killed: [3304315] (in reverse order)
[2026-01-10 00:30:03] 2026-01-10 05:29:32,882 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:30:03] 2026-01-10 05:29:32,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:30:03] 2026-01-10 05:29:32,900 | INFO     | did not find any defunct processes belonging to 3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:32,918 | INFO     | did not find any defunct processes belonging to 3304315
[2026-01-10 00:30:03] 2026-01-10 05:29:32,918 | INFO     | ready for new job
[2026-01-10 00:30:03] 2026-01-10 05:29:32,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:30:03] 2026-01-10 05:29:32,920 | INFO     | ***************************************
[2026-01-10 00:30:03] 2026-01-10 05:29:32,921 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:30:03] 2026-01-10 05:29:32,921 | INFO     | ***************************************
[2026-01-10 00:30:03] 2026-01-10 05:29:32,921 | INFO     | 
[2026-01-10 00:30:03] 2026-01-10 05:29:32,926 | INFO     | architecture information:
[2026-01-10 00:30:03] 2026-01-10 05:29:32,926 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:30:03] 2026-01-10 05:29:32,946 | INFO     | cat /etc/os-release:
[2026-01-10 00:30:03] NAME="CentOS Linux"
[2026-01-10 00:30:03] VERSION="7 (Core)"
[2026-01-10 00:30:03] ID="centos"
[2026-01-10 00:30:03] ID_LIKE="rhel fedora"
[2026-01-10 00:30:03] VERSION_ID="7"
[2026-01-10 00:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:30:03] ANSI_COLOR="0;31"
[2026-01-10 00:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:30:03] HOME_URL="https://www.centos.org/"
[2026-01-10 00:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:30:03] 
[2026-01-10 00:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:30:03] 
[2026-01-10 00:30:03] 2026-01-10 05:29:32,947 | INFO     | ***************************************
[2026-01-10 00:30:03] 2026-01-10 05:29:33,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 00:30:03] 2026-01-10 05:29:33,472 | INFO     | sufficient remaining disk space (74606182400 B)
[2026-01-10 00:30:03] 2026-01-10 05:29:33,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:30:03] 2026-01-10 05:29:33,472 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:30:03] 2026-01-10 05:29:33,472 | INFO     | update_server=False
[2026-01-10 00:30:03] 2026-01-10 05:29:33,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:30:03] 2026-01-10 05:29:33,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:30:03] 2026-01-10 05:29:33,473 | INFO     | aborting loop
[2026-01-10 00:30:03] 2026-01-10 05:29:33,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:30:03] 2026-01-10 05:29:34,100 | INFO     | all payload control threads have been joined
[2026-01-10 00:30:03] 2026-01-10 05:29:34,127 | INFO     | all data control threads have been joined
[2026-01-10 00:30:03] 2026-01-10 05:29:34,478 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:34,479 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:34,570 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:34,641 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:34,655 | INFO     | all job control threads have been joined
[2026-01-10 00:30:03] 2026-01-10 05:29:34,870 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,105 | INFO     | [payload] control thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,131 | INFO     | [data] control thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,346 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,394 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,486 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,573 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,576 | INFO     | [job] validate thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,660 | INFO     | [job] control thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:35,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:30:03] 2026-01-10 05:29:36,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:30:03] 2026-01-10 05:29:36,911 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:39,263 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:30:03] 2026-01-10 05:29:40,345 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:43,897 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:30:03] 2026-01-10 05:29:44,902 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:30:03] 2026-01-10 05:29:46,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879976269632)>', '<ExcThread(monitor, started 139879484741376)>']
[2026-01-10 00:30:03] 2026-01-10 05:29:51,792 | INFO     | all workflow threads have been joined
[2026-01-10 00:30:03] 2026-01-10 05:29:51,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:30:03] 2026-01-10 05:29:51,792 | INFO     | traces error code: 0
[2026-01-10 00:30:03] 2026-01-10 05:29:51,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:30:03] 2026-01-10 05:30:03,080 | INFO     | PID=3296974 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:30:03] 2026-01-10 05:30:03,080 | INFO     | .. there are 19 such processes running
[2026-01-10 00:30:03] 2026-01-10 05:30:03,081 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:30:03] 2026-01-10 05:30:03,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:30:03] 2026-01-10 05:30:03,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:30:03] 2026-01-10 05:30:03,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:30:03] 2026-01-10 05:30:03,081 | INFO     | [monitor] control thread has ended
[2026-01-10 00:30:03] 2026-01-10 05:30:03,194 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:30:03] 2026-01-10 05:30:03,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:30:03] 2026-01-10 05:30:03,198 [wrapper] pilotpid: 3296974
[2026-01-10 00:30:03] 2026-01-10 05:30:03,200 [wrapper] Pilot exit status: 0
[2026-01-10 00:30:03] 2026-01-10 05:30:03,209 [wrapper] pandaids: 6964539107
[2026-01-10 00:30:03] 2026-01-10 05:30:03,309 [wrapper] cleanup supervisor_pilot 3852970 3296975
[2026-01-10 00:30:03] 2026-01-10 05:30:03,312 [wrapper] Test setup, not cleaning
[2026-01-10 00:30:03] 2026-01-10 05:30:03,315 [wrapper] apfmon messages muted
[2026-01-10 00:30:03] 2026-01-10 05:30:03,317 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:30:03] 2026-01-10 05:30:03,320 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:30:03]  *** Error codes and diagnostics ***
[2026-01-10 00:30:03]     "exeErrorCode": 0,
[2026-01-10 00:30:03]     "exeErrorDiag": "",
[2026-01-10 00:30:03]     "pilotErrorCode": 0,
[2026-01-10 00:30:03]     "pilotErrorDiag": "",
[2026-01-10 00:30:03]  *** Listing of results directory ***
[2026-01-10 00:30:03] total 438176
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-10 00:30:03] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:30:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:36 run_atlas
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:36 job.xml
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas 226668900 Jan  9 21:36 EVNT.47898824._001028.pool.root.1
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:36 start_atlas.sh
[2026-01-10 00:30:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:36 shared
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 21:36 input.tar.gz
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:36 boinc_lockfile
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 21:36 pandaJob.out
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas        57 Jan  9 21:36 setup.sh.local
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas    989382 Jan  9 21:37 agis_schedconf.cvmfs.json
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:30:03] drwx------. 5 boincer umatlas      4096 Jan  9 21:37 pilot3
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 00:28 init_data.xml
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas 214545131 Jan 10 00:28 HITS.47898826._039991.pool.root.1
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas       530 Jan 10 00:28 boinc_task_state.xml
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas      1032 Jan 10 00:29 memory_monitor_summary.json
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas        95 Jan 10 00:29 pilot_heartbeat.json
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas    418969 Jan 10 00:29 log.47898826._039991.job.log.tgz.1
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas      7784 Jan 10 00:29 heartbeat.json
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:29 boinc_mmap_file
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:30 wrapper_checkpoint.txt
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas       823 Jan 10 00:30 pilotlog.txt
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas   1362832 Jan 10 00:30 log.47898826._039991.job.log.1
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas       357 Jan 10 00:30 output.list
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:30 runtime_log
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas   1802240 Jan 10 00:30 result.tar.gz
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:30 runtime_log.err
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas       654 Jan 10 00:30 236NDmP1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5ShKDm0PtEWm.diag
[2026-01-10 00:30:03] -rw-r--r--. 1 boincer umatlas     21446 Jan 10 00:30 stderr.txt
[2026-01-10 00:30:03] HITS file was successfully produced:
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas 214545131 Jan 10 00:28 shared/HITS.pool.root.1
[2026-01-10 00:30:03]  *** Contents of shared directory: ***
[2026-01-10 00:30:03] total 433240
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas 226668900 Jan  9 21:36 ATLAS.root_0
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:36 start_atlas.sh
[2026-01-10 00:30:03] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 21:36 input.tar.gz
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas 214545131 Jan 10 00:28 HITS.pool.root.1
[2026-01-10 00:30:03] -rw-------. 1 boincer umatlas   1802240 Jan 10 00:30 result.tar.gz
00:30:05 (3292971): run_atlas exited; CPU time 46396.345410
00:30:05 (3292971): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN