Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:50 (8998): wrapper (7.7.26015): starting
20:09:50 (8998): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 20:09:50] Arguments: --nthreads 12
[2026-01-09 20:09:50] Threads: 12
[2026-01-09 20:09:50] Checking for CVMFS
[2026-01-09 20:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:09:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:09:50] 2.11.2.0 2910 103023 94300 154962 0 57 14778041 20275200 1 130560 0 26126900 99.954 3832834 35612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:09:50] CVMFS is ok
[2026-01-09 20:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:09:50] Further information can be found at the LHC@home message board.
[2026-01-09 20:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:09:50] Checking for apptainer binary...
[2026-01-09 20:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:09:50] Running /usr/bin/apptainer --version
[2026-01-09 20:09:50] apptainer version 1.3.2-1.el7
[2026-01-09 20:09:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:09:52] c-205-11.aglt2.org
[2026-01-09 20:09:52] apptainer works
[2026-01-09 20:09:52] Set ATHENA_PROC_NUMBER=12
[2026-01-09 20:09:52] Set ATHENA_CORE_NUMBER=12
[2026-01-09 20:09:52] Starting ATLAS job with PandaID=6962918463
[2026-01-09 20:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:49:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:49:23]  mtime=0
[2026-01-09 21:49:23]  protocol_id=None
[2026-01-09 21:49:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 21:49:23]  replicas=None
[2026-01-09 21:49:23]  scope=mc23_13p6TeV
[2026-01-09 21:49:23]  status=None
[2026-01-09 21:49:23]  status_code=0
[2026-01-09 21:49:23]  storage_token=
[2026-01-09 21:49:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6962918463/log.47898826._020511.job.log.tgz.1
[2026-01-09 21:49:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/49/log.47898826._020511.job.log.tgz.1
[2026-01-09 21:49:23]  workdir=None
[2026-01-09 21:49:23] ]
[2026-01-09 21:49:23] 2026-01-10 02:48:40,508 | INFO     | transferring file log.47898826._020511.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6962918463/log.47898826._020511.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 21:49:23] 2026-01-10 02:48:40,508 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6962918463/log.47898826._020511.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._020511.job
[2026-01-09 21:49:23] 2026-01-10 02:48:40,530 | INFO     | adding to output.list: log.47898826._020511.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/49/log.47898826._020511.job.log.tg
[2026-01-09 21:49:23] 2026-01-10 02:48:40,531 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:49:23] 2026-01-10 02:48:40,532 | INFO     | summary of transferred files:
[2026-01-09 21:49:23] 2026-01-10 02:48:40,532 | INFO     |  -- lfn=log.47898826._020511.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:49:23] 2026-01-10 02:48:40,532 | INFO     | stage-out finished correctly
[2026-01-09 21:49:23] 2026-01-10 02:48:41,675 | INFO     | monitor loop #441: job 0:6962918463 is in state 'finished'
[2026-01-09 21:49:23] 2026-01-10 02:48:41,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:49:23] 2026-01-10 02:48:42,235 | INFO     | time since job start (5915s) is within the limit (174528.0s)
[2026-01-09 21:49:23] 2026-01-10 02:48:42,698 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:49:23] 2026-01-10 02:48:42,779 | INFO     | job 6962918463 has state=finished
[2026-01-09 21:49:23] 2026-01-10 02:48:42,780 | INFO     | preparing for final server update for job 6962918463 in state='finished'
[2026-01-09 21:49:23] 2026-01-10 02:48:42,780 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:49:23] 2026-01-10 02:48:42,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:49:23] 2026-01-10 02:48:42,781 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:49:23] 2026-01-10 02:48:42,781 | INFO     | job 6962918463 has finished - writing final server update
[2026-01-09 21:49:23] 2026-01-10 02:48:42,781 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:49:23] 2026-01-10 02:48:42,782 | INFO     | executing command: lscpu
[2026-01-09 21:49:23] 2026-01-10 02:48:42,809 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:49:23] 2026-01-10 02:48:44,178 | INFO     | monitor loop #442: job 0:6962918463 is in state 'finished'
[2026-01-09 21:49:23] 2026-01-10 02:48:44,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:49:23] 2026-01-10 02:48:44,241 | INFO     | time since job start (5917s) is within the limit (174528.0s)
[2026-01-09 21:49:23] 2026-01-10 02:48:46,244 | INFO     | time since job start (5919s) is within the limit (174528.0s)
[2026-01-09 21:49:23] 2026-01-10 02:48:46,681 | INFO     | monitor loop #443: job 0:6962918463 is in state 'finished'
[2026-01-09 21:49:23] 2026-01-10 02:48:46,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:49:23] 2026-01-10 02:48:48,250 | INFO     | time since job start (5921s) is within the limit (174528.0s)
[2026-01-09 21:49:23] 2026-01-10 02:48:48,788 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 21:49:23] 2026-01-10 02:48:48,792 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2026-01-09 21:49:23] 2026-01-10 02:48:48,795 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962918463/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:49:23] 2026-01-10 02:48:48,796 | INFO     | extracted standard info from prmon json
[2026-01-09 21:49:23] 2026-01-10 02:48:48,796 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:49:23] 2026-01-10 02:48:48,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:49:23] 2026-01-10 02:48:48,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:49:23] 2026-01-10 02:48:48,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:49:23] 2026-01-10 02:48:48,799 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:49:23] 2026-01-10 02:48:48,799 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 21:49:23] 2026-01-10 02:48:48,799 | INFO     | sum of deviations: 907281029.5
[2026-01-09 21:49:23] 2026-01-10 02:48:48,799 | INFO     | mean x: 1768010456.5
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | mean y: 2696841.966666667
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | intersect: -7094295344.299131
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | chi2: 0.02376347403406044
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | current memory leak: 4.01 B/s (using 90 data points, chi2=0.02)
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | could have reported an average CPU frequency of 2150 MHz (7 samples)
[2026-01-09 21:49:23] 2026-01-10 02:48:48,800 | INFO     | ..............................
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . Timing measurements:
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . get job = 0 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . initial setup = 2 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . payload setup = 7 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . stage-in = 0 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . payload execution = 5884 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . stage-out = 0 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | . log creation = 0 s
[2026-01-09 21:49:23] 2026-01-10 02:48:48,801 | INFO     | ..............................
[2026-01-09 21:49:23] 2026-01-10 02:48:49,227 | INFO     | 
[2026-01-09 21:49:23] 2026-01-10 02:48:49,227 | INFO     | job summary report
[2026-01-09 21:49:23] 2026-01-10 02:48:49,227 | INFO     | --------------------------------------------------
[2026-01-09 21:49:23] 2026-01-10 02:48:49,227 | INFO     | PanDA job id: 6962918463
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | task id: 47898826
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | errors: (none)
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | pilot state: finished 
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | transexitcode: 0
[2026-01-09 21:49:23] 2026-01-10 02:48:49,228 | INFO     | exeerrorcode: 0
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | exeerrordiag: 
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | exitcode: 0
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | exitmsg: OK
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | cpuconsumptiontime: 63364 s
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | nevents: 400
[2026-01-09 21:49:23] 2026-01-10 02:48:49,229 | INFO     | neventsw: 0
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | pid: 19154
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | pgrp: 19154
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | corecount: 12
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | event service: False
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | sizes: {0: 2283742, 1: 2283997, 6: 2284259, 12: 2284287, 5895: 2310983, 5896: 2310982, 5897: 2320164, 5899: 2320220, 5905: 2320414}
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | --------------------------------------------------
[2026-01-09 21:49:23] 2026-01-10 02:48:49,230 | INFO     | 
[2026-01-09 21:49:23] 2026-01-10 02:48:49,231 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:49:23] 2026-01-10 02:48:49,253 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,253 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,253 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,253 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,256 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:49:23] 2026-01-10 02:48:49,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,256 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:49:23] 2026-01-10 02:48:49,257 | INFO     | job 6962918463 has completed (purged errors)
[2026-01-09 21:49:23] 2026-01-10 02:48:49,257 | INFO     | overall cleanup function is called
[2026-01-09 21:49:23] 2026-01-10 02:48:50,263 | INFO     | --- collectZombieJob: --- 10, [19154]
[2026-01-09 21:49:23] 2026-01-10 02:48:50,263 | INFO     | zombie collector waiting for pid 19154
[2026-01-09 21:49:23] 2026-01-10 02:48:50,264 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:49:23] 2026-01-10 02:48:50,264 | INFO     | collected zombie processes
[2026-01-09 21:49:23] 2026-01-10 02:48:50,264 | INFO     | will attempt to kill all subprocesses of pid=19154
[2026-01-09 21:49:23] 2026-01-10 02:48:50,353 | INFO     | process IDs to be killed: [19154] (in reverse order)
[2026-01-09 21:49:23] 2026-01-10 02:48:50,403 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:49:23] 2026-01-10 02:48:50,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:49:23] 2026-01-10 02:48:50,407 | INFO     | did not find any defunct processes belonging to 19154
[2026-01-09 21:49:23] 2026-01-10 02:48:50,409 | INFO     | did not find any defunct processes belonging to 19154
[2026-01-09 21:49:23] 2026-01-10 02:48:50,410 | INFO     | ready for new job
[2026-01-09 21:49:23] 2026-01-10 02:48:50,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:49:23] 2026-01-10 02:48:50,411 | INFO     | ***************************************
[2026-01-09 21:49:23] 2026-01-10 02:48:50,411 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:49:23] 2026-01-10 02:48:50,411 | INFO     | ***************************************
[2026-01-09 21:49:23] 2026-01-10 02:48:50,411 | INFO     | 
[2026-01-09 21:49:23] 2026-01-10 02:48:50,412 | INFO     | architecture information:
[2026-01-09 21:49:23] 2026-01-10 02:48:50,412 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:49:23] 2026-01-10 02:48:50,426 | INFO     | cat /etc/os-release:
[2026-01-09 21:49:23] NAME="CentOS Linux"
[2026-01-09 21:49:23] VERSION="7 (Core)"
[2026-01-09 21:49:23] ID="centos"
[2026-01-09 21:49:23] ID_LIKE="rhel fedora"
[2026-01-09 21:49:23] VERSION_ID="7"
[2026-01-09 21:49:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:49:23] ANSI_COLOR="0;31"
[2026-01-09 21:49:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:49:23] HOME_URL="https://www.centos.org/"
[2026-01-09 21:49:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:49:23] 
[2026-01-09 21:49:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:49:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:49:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:49:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:49:23] 
[2026-01-09 21:49:23] 2026-01-10 02:48:50,427 | INFO     | ***************************************
[2026-01-09 21:49:23] 2026-01-10 02:48:50,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:49:23] 2026-01-10 02:48:50,947 | INFO     | sufficient remaining disk space (29349642240 B)
[2026-01-09 21:49:23] 2026-01-10 02:48:50,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:49:23] 2026-01-10 02:48:50,948 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:49:23] 2026-01-10 02:48:50,948 | INFO     | update_server=False
[2026-01-09 21:49:23] 2026-01-10 02:48:50,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:49:23] 2026-01-10 02:48:50,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:49:23] 2026-01-10 02:48:50,948 | INFO     | aborting loop
[2026-01-09 21:49:23] 2026-01-10 02:48:51,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:49:23] 2026-01-10 02:48:51,368 | INFO     | all data control threads have been joined
[2026-01-09 21:49:23] 2026-01-10 02:48:51,805 | INFO     | all job control threads have been joined
[2026-01-09 21:49:23] 2026-01-10 02:48:51,953 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:51,954 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,226 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,277 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,367 | INFO     | all payload control threads have been joined
[2026-01-09 21:49:23] 2026-01-10 02:48:52,374 | INFO     | [data] control thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,493 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,808 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:52,810 | INFO     | [job] control thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,084 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,132 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,275 | INFO     | [job] validate thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:49:23] 2026-01-10 02:48:53,368 | INFO     | [payload] control thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,421 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:53,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:49:23] 2026-01-10 02:48:54,894 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:48:57,293 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:49:23] 2026-01-10 02:49:16,883 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:49:23] 2026-01-10 02:49:18,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278298896192)>', '<ExcThread(monitor, started 140276978935552)>']
[2026-01-09 21:49:23] 2026-01-10 02:49:21,442 | INFO     | PID=12788 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:49:23] 2026-01-10 02:49:21,442 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:49:23] 2026-01-10 02:49:21,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:49:23] 2026-01-10 02:49:21,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:49:23] 2026-01-10 02:49:21,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:49:23] 2026-01-10 02:49:21,443 | INFO     | [monitor] control thread has ended
[2026-01-09 21:49:23] 2026-01-10 02:49:23,276 | INFO     | all workflow threads have been joined
[2026-01-09 21:49:23] 2026-01-10 02:49:23,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:49:23] 2026-01-10 02:49:23,277 | INFO     | traces error code: 0
[2026-01-09 21:49:23] 2026-01-10 02:49:23,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:49:23] 2026-01-10 02:49:23,360 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:49:23] 2026-01-10 02:49:23,364 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:49:23] 2026-01-10 02:49:23,367 [wrapper] pilotpid: 12788
[2026-01-09 21:49:23] 2026-01-10 02:49:23,371 [wrapper] Pilot exit status: 0
[2026-01-09 21:49:23] 2026-01-10 02:49:23,387 [wrapper] pandaids: 6962918463
[2026-01-09 21:49:23] 2026-01-10 02:49:23,429 [wrapper] cleanup supervisor_pilot 17437 12789
[2026-01-09 21:49:23] 2026-01-10 02:49:23,434 [wrapper] Test setup, not cleaning
[2026-01-09 21:49:23] 2026-01-10 02:49:23,438 [wrapper] apfmon messages muted
[2026-01-09 21:49:23] 2026-01-10 02:49:23,442 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:49:23] 2026-01-10 02:49:23,446 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:49:23]  *** Error codes and diagnostics ***
[2026-01-09 21:49:23]     "exeErrorCode": 0,
[2026-01-09 21:49:23]     "exeErrorDiag": "",
[2026-01-09 21:49:23]     "pilotErrorCode": 0,
[2026-01-09 21:49:23]     "pilotErrorDiag": "",
[2026-01-09 21:49:23]  *** Listing of results directory ***
[2026-01-09 21:49:23] total 437432
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 21:49:23] -rwx------ 1 boincer umatlas     36322 Jan  8 03:04 runpilot2-wrapper.sh
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas       100 Jan  9 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:49:23] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 20:09 run_atlas
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas       105 Jan  9 20:09 job.xml
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas 223119983 Jan  9 20:09 EVNT.47898824._000796.pool.root.1
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:09 start_atlas.sh
[2026-01-09 21:49:23] drwxrwx--x 2 boincer umatlas      4096 Jan  9 20:09 shared
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 20:09 input.tar.gz
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas         0 Jan  9 20:09 boinc_lockfile
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 20:09 pandaJob.out
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas    989374 Jan  9 20:10 agis_schedconf.cvmfs.json
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas   1516240 Jan  9 20:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:49:23] drwx------ 5 boincer umatlas      4096 Jan  9 20:10 pilot3
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas      5868 Jan  9 21:48 init_data.xml
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas 218405786 Jan  9 21:48 HITS.47898826._020511.pool.root.1
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas        95 Jan  9 21:48 pilot_heartbeat.json
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas       529 Jan  9 21:48 boinc_task_state.xml
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas      1046 Jan  9 21:48 memory_monitor_summary.json
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas    402696 Jan  9 21:48 log.47898826._020511.job.log.tgz.1
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas      7841 Jan  9 21:48 heartbeat.json
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 21:48 boinc_mmap_file
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas        27 Jan  9 21:49 wrapper_checkpoint.txt
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas      4746 Jan  9 21:49 pilotlog.txt
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas    843700 Jan  9 21:49 log.47898826._020511.job.log.1
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas       357 Jan  9 21:49 output.list
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas       620 Jan  9 21:49 runtime_log
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas   1269760 Jan  9 21:49 result.tar.gz
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas      8819 Jan  9 21:49 runtime_log.err
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas       659 Jan  9 21:49 LEVKDmZB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVXeKDm5knGZm.diag
[2026-01-09 21:49:23] -rw-r--r-- 1 boincer umatlas     21768 Jan  9 21:49 stderr.txt
[2026-01-09 21:49:23] HITS file was successfully produced:
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas 218405786 Jan  9 21:48 shared/HITS.pool.root.1
[2026-01-09 21:49:23]  *** Contents of shared directory: ***
[2026-01-09 21:49:23] total 433020
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas 223119983 Jan  9 20:09 ATLAS.root_0
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 20:09 start_atlas.sh
[2026-01-09 21:49:23] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 20:09 input.tar.gz
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas 218405786 Jan  9 21:48 HITS.pool.root.1
[2026-01-09 21:49:23] -rw------- 1 boincer umatlas   1269760 Jan  9 21:49 result.tar.gz
21:49:25 (8998): run_atlas exited; CPU time 63340.739642
21:49:25 (8998): called boinc_finish(0)

</stderr_txt>
]]>

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