Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:54:09 (2780025): wrapper (7.7.26015): starting
11:54:09 (2780025): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 11:54:09] Arguments: --nthreads 6
[2026-01-10 11:54:09] Threads: 6
[2026-01-10 11:54:09] Checking for CVMFS
[2026-01-10 11:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 11:54:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 11:54:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 11:54:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 11:54:10] 2.13.3.0 2288015 1271 75496 154964 1 253 12111752 20971520 929 130560 0 1552456 99.993 48093 16 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 11:54:10] CVMFS is ok
[2026-01-10 11:54:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 11:54:10] Checking for apptainer binary...
[2026-01-10 11:54:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 11:54:10] Running /usr/bin/apptainer --version
[2026-01-10 11:54:10] apptainer version 1.4.4-1.el9
[2026-01-10 11:54:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 11:54:10] testio006
[2026-01-10 11:54:10] apptainer works
[2026-01-10 11:54:10] Set ATHENA_PROC_NUMBER=6
[2026-01-10 11:54:10] Set ATHENA_CORE_NUMBER=6
[2026-01-10 11:54:10] Starting ATLAS job with PandaID=6963381447
[2026-01-10 11:54:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:19:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:19:25] 2026-01-10 12:18:23,631 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6963381447/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,631 | INFO     | extracted standard info from prmon json
[2026-01-10 21:19:25] 2026-01-10 12:18:23,631 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:19:25] 2026-01-10 12:18:23,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:19:25] 2026-01-10 12:18:23,638 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:19:25] 2026-01-10 12:18:23,638 | INFO     | sum of square deviations: 52438842291.93472
[2026-01-10 21:19:25] 2026-01-10 12:18:23,643 | INFO     | sum of deviations: 587352601044.5779
[2026-01-10 21:19:25] 2026-01-10 12:18:23,643 | INFO     | mean x: 1768030524.01085
[2026-01-10 21:19:25] 2026-01-10 12:18:23,643 | INFO     | mean y: 2676068.2368896925
[2026-01-10 21:19:25] 2026-01-10 12:18:23,644 | INFO     | intersect: -19800532424.100464
[2026-01-10 21:19:25] 2026-01-10 12:18:23,644 | INFO     | chi2: 9.203787509075813
[2026-01-10 21:19:25] 2026-01-10 12:18:23,645 | INFO     | sum of square deviations: 51029273506.93421
[2026-01-10 21:19:25] 2026-01-10 12:18:23,649 | INFO     | sum of deviations: 758614647649.4519
[2026-01-10 21:19:25] 2026-01-10 12:18:23,650 | INFO     | mean x: 1768030371.510949
[2026-01-10 21:19:25] 2026-01-10 12:18:23,650 | INFO     | mean y: 2694591.841240876
[2026-01-10 21:19:25] 2026-01-10 12:18:23,650 | INFO     | intersect: -26281311531.331356
[2026-01-10 21:19:25] 2026-01-10 12:18:23,650 | INFO     | chi2: 6.042907637993223
[2026-01-10 21:19:25] 2026-01-10 12:18:23,650 | INFO     | current chi2=6.042907637993223 (change=34.343251275256634 %)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,651 | INFO     | sum of square deviations: 49645193571.93392
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | sum of deviations: 838386356907.9729
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | mean x: 1768030219.0110497
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | mean y: 2703333.5046040514
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | intersect: -29855019188.45709
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | chi2: 4.480134373184321
[2026-01-10 21:19:25] 2026-01-10 12:18:23,656 | INFO     | current chi2=4.480134373184321 (change=25.86128000672008 %)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,657 | INFO     | sum of square deviations: 48286303430.46968
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | sum of deviations: 826460349370.7853
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | mean x: 1768030066.5074348
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | mean y: 2701994.553903346
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | intersect: -30258606961.67767
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | chi2: 4.473517287358719
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | current chi2=4.473517287358719 (change=0.14769837853990223 %)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,662 | INFO     | right removable region: 537
[2026-01-10 21:19:25] 2026-01-10 12:18:23,663 | INFO     | sum of square deviations: 51029269846.93421
[2026-01-10 21:19:25] 2026-01-10 12:18:23,668 | INFO     | sum of deviations: 421967945086.2488
[2026-01-10 21:19:25] 2026-01-10 12:18:23,668 | INFO     | mean x: 1768030676.510949
[2026-01-10 21:19:25] 2026-01-10 12:18:23,668 | INFO     | mean y: 2693948.041970803
[2026-01-10 21:19:25] 2026-01-10 12:18:23,668 | INFO     | intersect: -14617391223.75473
[2026-01-10 21:19:25] 2026-01-10 12:18:23,668 | INFO     | chi2: 6.531635177919015
[2026-01-10 21:19:25] 2026-01-10 12:18:23,669 | INFO     | current chi2=6.531635177919015 (change=29.03318148666297 %)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,669 | INFO     | sum of square deviations: 49645186251.933914
[2026-01-10 21:19:25] 2026-01-10 12:18:23,674 | INFO     | sum of deviations: 293536255836.9559
[2026-01-10 21:19:25] 2026-01-10 12:18:23,674 | INFO     | mean x: 1768030829.0110497
[2026-01-10 21:19:25] 2026-01-10 12:18:23,674 | INFO     | mean y: 2708091.674033149
[2026-01-10 21:19:25] 2026-01-10 12:18:23,674 | INFO     | intersect: -10451097985.687515
[2026-01-10 21:19:25] 2026-01-10 12:18:23,674 | INFO     | chi2: 5.051061569698269
[2026-01-10 21:19:25] 2026-01-10 12:18:23,675 | INFO     | current chi2=5.051061569698269 (change=22.66773277886072 %)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,675 | INFO     | left removable region: 20
[2026-01-10 21:19:25] 2026-01-10 12:18:23,675 | INFO     | sum of square deviations: 42849781977.96905
[2026-01-10 21:19:25] 2026-01-10 12:18:23,679 | INFO     | sum of deviations: 473723041237.3573
[2026-01-10 21:19:25] 2026-01-10 12:18:23,680 | INFO     | mean x: 1768030646.007737
[2026-01-10 21:19:25] 2026-01-10 12:18:23,680 | INFO     | mean y: 2742481.160541586
[2026-01-10 21:19:25] 2026-01-10 12:18:23,680 | INFO     | intersect: -19543607954.37398
[2026-01-10 21:19:25] 2026-01-10 12:18:23,680 | INFO     | chi2: 0.18694743982190448
[2026-01-10 21:19:25] 2026-01-10 12:18:23,680 | INFO     | current memory leak: 11.06 B/s (using 517 data points, chi2=0.19)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | could have reported an average CPU frequency of 3936 MHz (21 samples)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | ..............................
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . Timing measurements:
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . get job = 0 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . initial setup = 5 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . payload setup = 5 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . stage-in = 0 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . payload execution = 33686 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . stage-out = 5 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | . log creation = 0 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,681 | INFO     | ..............................
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | 
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | job summary report
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | --------------------------------------------------
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | PanDA job id: 6963381447
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | task id: 47962010
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | errors: (none)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | pilot state: finished 
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | transexitcode: 0
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | exeerrorcode: 0
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | exeerrordiag: 
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | exitcode: 0
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | exitmsg: OK
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | cpuconsumptiontime: 194797 s
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | nevents: 900
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | neventsw: 0
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | pid: 2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | pgrp: 2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:23,749 | INFO     | corecount: 6
[2026-01-10 21:19:25] 2026-01-10 12:18:23,750 | INFO     | event service: False
[2026-01-10 21:19:25] 2026-01-10 12:18:23,750 | INFO     | sizes: {0: 2284623, 5: 2284885, 11: 2284941, 33695: 2325448, 33696: 2325447, 33702: 2334527, 33704: 2334711, 33825: 2334957}
[2026-01-10 21:19:25] 2026-01-10 12:18:23,750 | INFO     | --------------------------------------------------
[2026-01-10 21:19:25] 2026-01-10 12:18:23,750 | INFO     | 
[2026-01-10 21:19:25] 2026-01-10 12:18:23,750 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-01-10 21:19:25] 2026-01-10 12:18:23,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | job 6963381447 has completed (purged errors)
[2026-01-10 21:19:25] 2026-01-10 12:18:23,768 | INFO     | overall cleanup function is called
[2026-01-10 21:19:25] 2026-01-10 12:18:24,782 | INFO     | --- collectZombieJob: --- 10, [2790526]
[2026-01-10 21:19:25] 2026-01-10 12:18:24,782 | INFO     | zombie collector waiting for pid 2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:24,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:19:25] 2026-01-10 12:18:24,782 | INFO     | collected zombie processes
[2026-01-10 21:19:25] 2026-01-10 12:18:24,782 | INFO     | will attempt to kill all subprocesses of pid=2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:24,857 | INFO     | process IDs to be killed: [2790526] (in reverse order)
[2026-01-10 21:19:25] 2026-01-10 12:18:24,891 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:19:25] 2026-01-10 12:18:24,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:19:25] 2026-01-10 12:18:24,894 | INFO     | did not find any defunct processes belonging to 2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:24,897 | INFO     | did not find any defunct processes belonging to 2790526
[2026-01-10 21:19:25] 2026-01-10 12:18:24,897 | INFO     | ready for new job
[2026-01-10 21:19:25] 2026-01-10 12:18:24,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:19:25] 2026-01-10 12:18:24,899 | INFO     | ***************************************
[2026-01-10 21:19:25] 2026-01-10 12:18:24,899 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:19:25] 2026-01-10 12:18:24,899 | INFO     | ***************************************
[2026-01-10 21:19:25] 2026-01-10 12:18:24,899 | INFO     | 
[2026-01-10 21:19:25] 2026-01-10 12:18:24,900 | INFO     | architecture information:
[2026-01-10 21:19:25] 2026-01-10 12:18:24,900 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:19:25] 2026-01-10 12:18:24,911 | INFO     | cat /etc/os-release:
[2026-01-10 21:19:25] NAME="CentOS Linux"
[2026-01-10 21:19:25] VERSION="7 (Core)"
[2026-01-10 21:19:25] ID="centos"
[2026-01-10 21:19:25] ID_LIKE="rhel fedora"
[2026-01-10 21:19:25] VERSION_ID="7"
[2026-01-10 21:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:19:25] ANSI_COLOR="0;31"
[2026-01-10 21:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:19:25] HOME_URL="https://www.centos.org/"
[2026-01-10 21:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:19:25] 
[2026-01-10 21:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:19:25] 
[2026-01-10 21:19:25] 2026-01-10 12:18:24,911 | INFO     | ***************************************
[2026-01-10 21:19:25] 2026-01-10 12:18:25,414 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-01-10 21:19:25] 2026-01-10 12:18:25,429 | INFO     | sufficient remaining disk space (92025126912 B)
[2026-01-10 21:19:25] 2026-01-10 12:18:25,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | INFO     | update_server=False
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:19:25] 2026-01-10 12:18:25,430 | INFO     | aborting loop
[2026-01-10 21:19:25] 2026-01-10 12:18:25,933 | INFO     | all payload control threads have been joined
[2026-01-10 21:19:25] 2026-01-10 12:18:25,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:19:25] 2026-01-10 12:18:25,965 | INFO     | all data control threads have been joined
[2026-01-10 21:19:25] 2026-01-10 12:18:26,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:19:25] 2026-01-10 12:18:26,435 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,435 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,435 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,529 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,900 | INFO     | [job] validate thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,913 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,938 | INFO     | [payload] control thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:26,970 | INFO     | [data] control thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:27,004 | INFO     | all job control threads have been joined
[2026-01-10 21:19:25] 2026-01-10 12:18:27,187 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:27,508 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:27,866 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:27,925 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:28,009 | INFO     | [job] control thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:28,305 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:29,939 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:19:25] 2026-01-10 12:18:56,312 | INFO     | PID=2783810 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:19:25] 2026-01-10 12:18:56,313 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:19:25] 2026-01-10 12:18:56,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:19:25] 2026-01-10 12:18:56,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:19:25] 2026-01-10 12:19:18,441 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:19:25] 2026-01-10 12:19:20,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917337245504)>', '<ExcThread(monitor, started 139916981810944)>']
[2026-01-10 21:19:25] 2026-01-10 12:19:20,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:19:25] 2026-01-10 12:19:20,432 | INFO     | [monitor] control thread has ended
[2026-01-10 21:19:25] 2026-01-10 12:19:25,436 | INFO     | all workflow threads have been joined
[2026-01-10 21:19:25] 2026-01-10 12:19:25,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:19:25] 2026-01-10 12:19:25,436 | INFO     | traces error code: 0
[2026-01-10 21:19:25] 2026-01-10 12:19:25,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:19:25] 2026-01-10 12:19:25,536 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:19:25] 2026-01-10 12:19:25,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:19:25] 2026-01-10 12:19:25,541 [wrapper] pilotpid: 2783810
[2026-01-10 21:19:25] 2026-01-10 12:19:25,546 [wrapper] Pilot exit status: 0
[2026-01-10 21:19:25] 2026-01-10 12:19:25,557 [wrapper] pandaids: 6963381447
[2026-01-10 21:19:25] 2026-01-10 12:19:25,583 [wrapper] cleanup supervisor_pilot 2856739 2783811
[2026-01-10 21:19:25] 2026-01-10 12:19:25,589 [wrapper] Test setup, not cleaning
[2026-01-10 21:19:25] 2026-01-10 12:19:25,591 [wrapper] apfmon messages muted
[2026-01-10 21:19:25] 2026-01-10 12:19:25,594 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:19:25] 2026-01-10 12:19:25,596 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:19:25]  *** Error codes and diagnostics ***
[2026-01-10 21:19:25]     "exeErrorCode": 0,
[2026-01-10 21:19:25]     "exeErrorDiag": "",
[2026-01-10 21:19:25]     "pilotErrorCode": 0,
[2026-01-10 21:19:25]     "pilotErrorDiag": "",
[2026-01-10 21:19:25]  *** Listing of results directory ***
[2026-01-10 21:19:25] total 1173480
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:13 pilot3.tar.gz
[2026-01-10 21:19:25] -rwx------. 1 boinc boinc     36322 Jan  9 16:15 runpilot2-wrapper.sh
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:16 queuedata.json
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc       100 Jan 10 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:19:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 11:54 run_atlas
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc       105 Jan 10 11:54 job.xml
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc 393201107 Jan 10 11:54 EVNT.47962006._000031.pool.root.1
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc     15847 Jan 10 11:54 start_atlas.sh
[2026-01-10 21:19:25] drwxrwx--x. 2 boinc boinc        68 Jan 10 11:54 shared
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc    592608 Jan 10 11:54 input.tar.gz
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc         0 Jan 10 11:54 boinc_lockfile
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc      2892 Jan 10 11:54 pandaJob.out
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc    989382 Jan 10 11:54 agis_schedconf.cvmfs.json
[2026-01-10 21:19:25] drwx------. 5 boinc boinc      4096 Jan 10 11:54 pilot3
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc      9365 Jan 10 15:08 init_data.xml
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc       533 Jan 10 21:08 boinc_task_state.xml
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc 792038749 Jan 10 21:15 HITS.47962010._001580.pool.root.1
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc      1043 Jan 10 21:16 memory_monitor_summary.json
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc   1516240 Jan 10 21:16 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc   1576288 Jan 10 21:16 log.47962010._001580.job.log.tgz.1
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc        95 Jan 10 21:18 pilot_heartbeat.json
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc      8576 Jan 10 21:18 heartbeat.json
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc      8192 Jan 10 21:19 boinc_mmap_file
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc      4749 Jan 10 21:19 pilotlog.txt
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc        29 Jan 10 21:19 wrapper_checkpoint.txt
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc   4673100 Jan 10 21:19 log.47962010._001580.job.log.1
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc       353 Jan 10 21:19 output.list
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc       620 Jan 10 21:19 runtime_log
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc   6266880 Jan 10 21:19 result.tar.gz
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc      8792 Jan 10 21:19 runtime_log.err
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc       650 Jan 10 21:19 dMQLDmKtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHXmKDmQaQtEo.diag
[2026-01-10 21:19:25] -rw-r--r--. 1 boinc boinc     20745 Jan 10 21:19 stderr.txt
[2026-01-10 21:19:25] HITS file was successfully produced:
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc 792038749 Jan 10 21:15 shared/HITS.pool.root.1
[2026-01-10 21:19:25]  *** Contents of shared directory: ***
[2026-01-10 21:19:25] total 1164180
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc 393201107 Jan 10 11:54 ATLAS.root_0
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc     15847 Jan 10 11:54 start_atlas.sh
[2026-01-10 21:19:25] -rw-r--r--. 2 boinc boinc    592608 Jan 10 11:54 input.tar.gz
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc 792038749 Jan 10 21:15 HITS.pool.root.1
[2026-01-10 21:19:25] -rw-------. 1 boinc boinc   6266880 Jan 10 21:19 result.tar.gz
21:19:27 (2780025): run_atlas exited; CPU time 194780.306290
21:19:27 (2780025): called boinc_finish(0)

</stderr_txt>
]]>

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