Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:50 (2749363): wrapper (7.7.26015): starting
00:00:50 (2749363): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 00:00:50] Arguments: --nthreads 12
[2026-01-10 00:00:50] Threads: 12
[2026-01-10 00:00:50] Checking for CVMFS
[2026-01-10 00:00:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:00:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:00:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:00:53] 2.13.3.0 12348 94404 390604 154968 3 110 28977586 32935936 18894 16776704 0 336922055 99.471 455067237 34521 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 00:00:53] CVMFS is ok
[2026-01-10 00:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:00:53] Further information can be found at the LHC@home message board.
[2026-01-10 00:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:00:53] Checking for apptainer binary...
[2026-01-10 00:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:00:53] Running /usr/bin/apptainer --version
[2026-01-10 00:00:53] apptainer version 1.4.5-2.el9
[2026-01-10 00:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:00:54] c6-12-27-2.aglt2.org
[2026-01-10 00:00:54] apptainer works
[2026-01-10 00:00:54] Set ATHENA_PROC_NUMBER=12
[2026-01-10 00:00:54] Set ATHENA_CORE_NUMBER=12
[2026-01-10 00:00:54] Starting ATLAS job with PandaID=6964539207
[2026-01-10 00:00:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:47:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:47:59] 2026-01-10 08:47:26,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:47:59] 2026-01-10 08:47:26,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:47:59] 2026-01-10 08:47:26,312 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:47:59] 2026-01-10 08:47:26,312 | INFO     | sum of square deviations: 3256778728.246582
[2026-01-10 03:47:59] 2026-01-10 08:47:26,337 | INFO     | sum of deviations: 46200065363.42464
[2026-01-10 03:47:59] 2026-01-10 08:47:26,337 | INFO     | mean x: 1768028128.4520547
[2026-01-10 03:47:59] 2026-01-10 08:47:26,337 | INFO     | mean y: 2687637.278538813
[2026-01-10 03:47:59] 2026-01-10 08:47:26,338 | INFO     | intersect: -25078234929.06222
[2026-01-10 03:47:59] 2026-01-10 08:47:26,338 | INFO     | chi2: 1.5110559533217585
[2026-01-10 03:47:59] 2026-01-10 08:47:26,338 | INFO     | sum of square deviations: 3038786229.700955
[2026-01-10 03:47:59] 2026-01-10 08:47:26,357 | INFO     | sum of deviations: 44692040046.32707
[2026-01-10 03:47:59] 2026-01-10 08:47:26,357 | INFO     | mean x: 1768027975.962617
[2026-01-10 03:47:59] 2026-01-10 08:47:26,357 | INFO     | mean y: 2686582.4158878503
[2026-01-10 03:47:59] 2026-01-10 08:47:26,357 | INFO     | intersect: -26000056332.64723
[2026-01-10 03:47:59] 2026-01-10 08:47:26,358 | INFO     | chi2: 1.5117359439433955
[2026-01-10 03:47:59] 2026-01-10 08:47:26,358 | INFO     | current chi2=1.5117359439433955 (change=-0.04500102197686416 %)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,358 | INFO     | right removable region: 213
[2026-01-10 03:47:59] 2026-01-10 08:47:26,358 | INFO     | sum of square deviations: 3038725839.700955
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | sum of deviations: 7792182993.869158
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | mean x: 1768028280.962617
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | mean y: 2714249.23364486
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | intersect: -4531028059.336193
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | chi2: 0.033192933274900915
[2026-01-10 03:47:59] 2026-01-10 08:47:26,360 | INFO     | current chi2=0.033192933274900915 (change=97.80332864564461 %)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,365 | INFO     | sum of square deviations: 2830626626.105273
[2026-01-10 03:47:59] 2026-01-10 08:47:26,366 | INFO     | sum of deviations: 9532201242.157896
[2026-01-10 03:47:59] 2026-01-10 08:47:26,367 | INFO     | mean x: 1768028433.4736843
[2026-01-10 03:47:59] 2026-01-10 08:47:26,367 | INFO     | mean y: 2712948.937799043
[2026-01-10 03:47:59] 2026-01-10 08:47:26,367 | INFO     | intersect: -5951164074.015616
[2026-01-10 03:47:59] 2026-01-10 08:47:26,367 | INFO     | chi2: 0.002408074142330192
[2026-01-10 03:47:59] 2026-01-10 08:47:26,367 | INFO     | current chi2=0.002408074142330192 (change=92.74522042873784 %)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,368 | INFO     | sum of square deviations: 2632286405.823519
[2026-01-10 03:47:59] 2026-01-10 08:47:26,373 | INFO     | sum of deviations: 7905229676.529411
[2026-01-10 03:47:59] 2026-01-10 08:47:26,373 | INFO     | mean x: 1768028585.9705882
[2026-01-10 03:47:59] 2026-01-10 08:47:26,373 | INFO     | mean y: 2714197.9215686275
[2026-01-10 03:47:59] 2026-01-10 08:47:26,373 | INFO     | intersect: -5306993748.693146
[2026-01-10 03:47:59] 2026-01-10 08:47:26,374 | INFO     | chi2: 0.0016922764746463762
[2026-01-10 03:47:59] 2026-01-10 08:47:26,374 | INFO     | current chi2=0.0016922764746463762 (change=29.724901534434007 %)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,374 | INFO     | sum of square deviations: 2443435101.537692
[2026-01-10 03:47:59] 2026-01-10 08:47:26,375 | INFO     | sum of deviations: 6979917417.683418
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | mean x: 1768028738.4673367
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | mean y: 2714942.8743718592
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | intersect: -5047836462.737675
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | chi2: 0.0015532408346634239
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | current chi2=0.0015532408346634239 (change=8.215893919579875 %)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,376 | INFO     | left removable region: 40
[2026-01-10 03:47:59] 2026-01-10 08:47:26,377 | INFO     | sum of square deviations: 1605328401.2485538
[2026-01-10 03:47:59] 2026-01-10 08:47:26,382 | INFO     | sum of deviations: 4302720603.2832365
[2026-01-10 03:47:59] 2026-01-10 08:47:26,382 | INFO     | mean x: 1768029165.49711
[2026-01-10 03:47:59] 2026-01-10 08:47:26,382 | INFO     | mean y: 2716410.5664739884
[2026-01-10 03:47:59] 2026-01-10 08:47:26,382 | INFO     | intersect: -4736086884.55584
[2026-01-10 03:47:59] 2026-01-10 08:47:26,382 | INFO     | chi2: 0.0015146902927683497
[2026-01-10 03:47:59] 2026-01-10 08:47:26,383 | INFO     | current memory leak: 2.68 B/s (using 173 data points, chi2=0.00)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,383 | INFO     | could have reported an average CPU frequency of 2708 MHz (11 samples)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,383 | INFO     | ..............................
[2026-01-10 03:47:59] 2026-01-10 08:47:26,383 | INFO     | . Timing measurements:
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . get job = 0 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . initial setup = 9 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . payload setup = 46 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . stage-in = 0 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . payload execution = 13357 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . stage-out = 2 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | . log creation = 0 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,384 | INFO     | ..............................
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | 
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | job summary report
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | --------------------------------------------------
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | PanDA job id: 6964539207
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | task id: 47898826
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | errors: (none)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | pilot state: finished 
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | transexitcode: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | exeerrorcode: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:26,631 | INFO     | exeerrordiag: 
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | exitcode: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | exitmsg: OK
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | cpuconsumptiontime: 57533 s
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | nevents: 400
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | neventsw: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | pid: 2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | pgrp: 2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | corecount: 12
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | event service: False
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283805, 3: 2284004, 14: 2284004, 25: 2284032, 37: 2284188, 39: 2284478, 48: 2284506, 13408: 2314625, 13412: 2323623, 13413: 232
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | --------------------------------------------------
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | 
[2026-01-10 03:47:59] 2026-01-10 08:47:26,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 03:47:59] 2026-01-10 08:47:26,653 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | job 6964539207 has completed (purged errors)
[2026-01-10 03:47:59] 2026-01-10 08:47:26,655 | INFO     | overall cleanup function is called
[2026-01-10 03:47:59] 2026-01-10 08:47:27,665 | INFO     | --- collectZombieJob: --- 10, [2768993]
[2026-01-10 03:47:59] 2026-01-10 08:47:27,665 | INFO     | zombie collector waiting for pid 2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:27,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:47:59] 2026-01-10 08:47:27,665 | INFO     | collected zombie processes
[2026-01-10 03:47:59] 2026-01-10 08:47:27,665 | INFO     | will attempt to kill all subprocesses of pid=2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:28,131 | INFO     | process IDs to be killed: [2768993] (in reverse order)
[2026-01-10 03:47:59] 2026-01-10 08:47:28,245 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:47:59] 2026-01-10 08:47:28,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:47:59] 2026-01-10 08:47:28,288 | INFO     | did not find any defunct processes belonging to 2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:28,322 | INFO     | did not find any defunct processes belonging to 2768993
[2026-01-10 03:47:59] 2026-01-10 08:47:28,322 | INFO     | ready for new job
[2026-01-10 03:47:59] 2026-01-10 08:47:28,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:47:59] 2026-01-10 08:47:28,325 | INFO     | ***************************************
[2026-01-10 03:47:59] 2026-01-10 08:47:28,325 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:47:59] 2026-01-10 08:47:28,325 | INFO     | ***************************************
[2026-01-10 03:47:59] 2026-01-10 08:47:28,325 | INFO     | 
[2026-01-10 03:47:59] 2026-01-10 08:47:28,331 | INFO     | architecture information:
[2026-01-10 03:47:59] 2026-01-10 08:47:28,331 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:47:59] 2026-01-10 08:47:28,352 | INFO     | cat /etc/os-release:
[2026-01-10 03:47:59] NAME="CentOS Linux"
[2026-01-10 03:47:59] VERSION="7 (Core)"
[2026-01-10 03:47:59] ID="centos"
[2026-01-10 03:47:59] ID_LIKE="rhel fedora"
[2026-01-10 03:47:59] VERSION_ID="7"
[2026-01-10 03:47:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:47:59] ANSI_COLOR="0;31"
[2026-01-10 03:47:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:47:59] HOME_URL="https://www.centos.org/"
[2026-01-10 03:47:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:47:59] 
[2026-01-10 03:47:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:47:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:47:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:47:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:47:59] 
[2026-01-10 03:47:59] 2026-01-10 08:47:28,353 | INFO     | ***************************************
[2026-01-10 03:47:59] 2026-01-10 08:47:28,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 03:47:59] 2026-01-10 08:47:28,883 | INFO     | sufficient remaining disk space (94164221952 B)
[2026-01-10 03:47:59] 2026-01-10 08:47:28,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:47:59] 2026-01-10 08:47:28,883 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:47:59] 2026-01-10 08:47:28,884 | INFO     | update_server=False
[2026-01-10 03:47:59] 2026-01-10 08:47:28,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:47:59] 2026-01-10 08:47:28,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:47:59] 2026-01-10 08:47:28,884 | INFO     | aborting loop
[2026-01-10 03:47:59] 2026-01-10 08:47:28,904 | INFO     | all data control threads have been joined
[2026-01-10 03:47:59] 2026-01-10 08:47:28,942 | INFO     | all payload control threads have been joined
[2026-01-10 03:47:59] 2026-01-10 08:47:29,211 | INFO     | all job control threads have been joined
[2026-01-10 03:47:59] 2026-01-10 08:47:29,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:47:59] 2026-01-10 08:47:29,890 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:29,909 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:29,910 | INFO     | [data] control thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:29,912 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:29,947 | INFO     | [payload] control thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:47:59] 2026-01-10 08:47:30,217 | INFO     | [job] control thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,258 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,618 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,647 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,783 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:30,859 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:31,074 | INFO     | [job] validate thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:31,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:47:59] 2026-01-10 08:47:31,793 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:32,649 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:34,094 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:39,091 | INFO     | job.realtimelogging is not enabled
[2026-01-10 03:47:59] 2026-01-10 08:47:40,097 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:47:59] 2026-01-10 08:47:40,536 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:47:59] 2026-01-10 08:47:41,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101151582016)>', '<ExcThread(monitor, started 140100650379008)>']
[2026-01-10 03:47:59] 2026-01-10 08:47:46,698 | INFO     | all workflow threads have been joined
[2026-01-10 03:47:59] 2026-01-10 08:47:46,698 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:47:59] 2026-01-10 08:47:46,698 | INFO     | traces error code: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:46,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:47:59] 2026-01-10 08:47:59,152 | INFO     | PID=2755532 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 03:47:59] 2026-01-10 08:47:59,153 | INFO     | .. there are 15 such processes running
[2026-01-10 03:47:59] 2026-01-10 08:47:59,154 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:47:59] 2026-01-10 08:47:59,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:47:59] 2026-01-10 08:47:59,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:47:59] 2026-01-10 08:47:59,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:47:59] 2026-01-10 08:47:59,154 | INFO     | [monitor] control thread has ended
[2026-01-10 03:47:59] 2026-01-10 08:47:59,525 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:47:59] 2026-01-10 08:47:59,533 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:47:59] 2026-01-10 08:47:59,536 [wrapper] pilotpid: 2755532
[2026-01-10 03:47:59] 2026-01-10 08:47:59,540 [wrapper] Pilot exit status: 0
[2026-01-10 03:47:59] 2026-01-10 08:47:59,555 [wrapper] pandaids: 6964539207
[2026-01-10 03:47:59] 2026-01-10 08:47:59,627 [wrapper] cleanup supervisor_pilot 3276077 2755533
[2026-01-10 03:47:59] 2026-01-10 08:47:59,630 [wrapper] Test setup, not cleaning
[2026-01-10 03:47:59] 2026-01-10 08:47:59,632 [wrapper] apfmon messages muted
[2026-01-10 03:47:59] 2026-01-10 08:47:59,634 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:47:59] 2026-01-10 08:47:59,636 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:47:59]  *** Error codes and diagnostics ***
[2026-01-10 03:47:59]     "exeErrorCode": 0,
[2026-01-10 03:47:59]     "exeErrorDiag": "",
[2026-01-10 03:47:59]     "pilotErrorCode": 0,
[2026-01-10 03:47:59]     "pilotErrorDiag": "",
[2026-01-10 03:47:59]  *** Listing of results directory ***
[2026-01-10 03:47:59] total 435936
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-10 03:47:59] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas       100 Jan 10 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:47:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 00:00 run_atlas
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas       105 Jan 10 00:00 job.xml
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas 222919912 Jan 10 00:00 EVNT.47898824._001378.pool.root.1
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:00 start_atlas.sh
[2026-01-10 03:47:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 00:00 shared
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas    592400 Jan 10 00:00 input.tar.gz
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas         0 Jan 10 00:00 boinc_lockfile
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 00:00 pandaJob.out
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas        57 Jan 10 00:00 setup.sh.local
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas    989374 Jan 10 00:02 agis_schedconf.cvmfs.json
[2026-01-10 03:47:59] drwx------. 5 boincer umatlas      4096 Jan 10 00:02 pilot3
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas      6878 Jan 10 03:36 init_data.xml
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas 215201243 Jan 10 03:46 HITS.47898826._040091.pool.root.1
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas       531 Jan 10 03:46 boinc_task_state.xml
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas      1042 Jan 10 03:47 memory_monitor_summary.json
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas    502489 Jan 10 03:47 log.47898826._040091.job.log.tgz.1
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas      7828 Jan 10 03:47 heartbeat.json
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas        28 Jan 10 03:47 wrapper_checkpoint.txt
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 03:47 boinc_mmap_file
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas        95 Jan 10 03:47 pilot_heartbeat.json
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas       823 Jan 10 03:47 pilotlog.txt
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas   1675340 Jan 10 03:47 log.47898826._040091.job.log.1
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas       357 Jan 10 03:47 output.list
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:47 runtime_log
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas   2201600 Jan 10 03:47 result.tar.gz
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas       658 Jan 10 03:47 tomLDmP1Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKemKDmTeyx1m.diag
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas      9355 Jan 10 03:47 runtime_log.err
[2026-01-10 03:47:59] -rw-r--r--. 1 boincer umatlas     21069 Jan 10 03:47 stderr.txt
[2026-01-10 03:47:59] HITS file was successfully produced:
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas 215201243 Jan 10 03:46 shared/HITS.pool.root.1
[2026-01-10 03:47:59]  *** Contents of shared directory: ***
[2026-01-10 03:47:59] total 430612
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas 222919912 Jan 10 00:00 ATLAS.root_0
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:00 start_atlas.sh
[2026-01-10 03:47:59] -rw-r--r--. 2 boincer umatlas    592400 Jan 10 00:00 input.tar.gz
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas 215201243 Jan 10 03:46 HITS.pool.root.1
[2026-01-10 03:47:59] -rw-------. 1 boincer umatlas   2201600 Jan 10 03:47 result.tar.gz
03:48:01 (2749363): run_atlas exited; CPU time 57991.343640
03:48:01 (2749363): called boinc_finish(0)

</stderr_txt>
]]>

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