Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:00 (12283): wrapper (7.7.26015): starting
19:39:00 (12283): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 19:39:00] Arguments: --nthreads 12
[2026-01-09 19:39:00] Threads: 12
[2026-01-09 19:39:00] Checking for CVMFS
[2026-01-09 19:39:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:39:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:39:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:39:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:39:01] 2.11.2.0 3009 137039 99252 154962 1 57 13544768 20275200 1 130560 0 49823261 99.879 8122493 39493 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:39:01] CVMFS is ok
[2026-01-09 19:39:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:39:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:39:01] Further information can be found at the LHC@home message board.
[2026-01-09 19:39:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:39:01] Checking for apptainer binary...
[2026-01-09 19:39:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:39:01] Running /usr/bin/apptainer --version
[2026-01-09 19:39:01] apptainer version 1.3.2-1.el7
[2026-01-09 19:39:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:39:02] c-115-42.aglt2.org
[2026-01-09 19:39:02] apptainer works
[2026-01-09 19:39:02] Set ATHENA_PROC_NUMBER=12
[2026-01-09 19:39:02] Set ATHENA_CORE_NUMBER=12
[2026-01-09 19:39:02] Starting ATLAS job with PandaID=6962318758
[2026-01-09 19:39:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:12:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:12:31] 2026-01-10 02:11:59,519 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:12:31] 2026-01-10 02:11:59,519 | INFO     | summary of transferred files:
[2026-01-09 21:12:31] 2026-01-10 02:11:59,519 | INFO     |  -- lfn=log.47898826._013087.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:12:31] 2026-01-10 02:11:59,519 | INFO     | stage-out finished correctly
[2026-01-09 21:12:31] 2026-01-10 02:12:00,395 | WARNING  | process 22470 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 21:12:31] 2026-01-10 02:12:00,395 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962318758/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962318758/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,401 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-09 21:12:31] 2026-01-10 02:12:00,401 | WARNING  | maxPSS not found in memory monitor output
[2026-01-09 21:12:31] 2026-01-10 02:12:00,401 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4557127 B
[2026-01-09 21:12:31] 2026-01-10 02:12:00,401 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15604 B
[2026-01-09 21:12:31] 2026-01-10 02:12:00,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:12:31] 2026-01-10 02:12:00,418 | INFO     | sufficient remaining disk space (18526240768 B)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,419 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,420 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6962318758: 4862257 B (within 2768240640 B limit)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,420 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6962318758/HITS.47898826._013087.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,420 | INFO     | total size of present files: 0 B (workdir size: 4862257 B)
[2026-01-09 21:12:31] 2026-01-10 02:12:00,420 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6962318758/HITS.47898826._013087.pool.root.1 since it does not exist
[2026-01-09 21:12:31] 2026-01-10 02:12:00,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:12:31] 2026-01-10 02:12:00,585 | INFO     | number of running child processes to parent process 22470: 1
[2026-01-09 21:12:31] 2026-01-10 02:12:00,585 | INFO     | maximum number of monitored processes: 6
[2026-01-09 21:12:31] 2026-01-10 02:12:01,395 | INFO     | time since job start (5564s) is within the limit (174528.0s)
[2026-01-09 21:12:31] 2026-01-10 02:12:02,644 | INFO     | job 6962318758 has state=finished
[2026-01-09 21:12:31] 2026-01-10 02:12:02,644 | INFO     | preparing for final server update for job 6962318758 in state='finished'
[2026-01-09 21:12:31] 2026-01-10 02:12:02,645 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:12:31] 2026-01-10 02:12:02,645 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:12:31] 2026-01-10 02:12:02,645 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:12:31] 2026-01-10 02:12:02,645 | INFO     | job 6962318758 has finished - writing final server update
[2026-01-09 21:12:31] 2026-01-10 02:12:02,646 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:12:31] 2026-01-10 02:12:02,647 | INFO     | executing command: lscpu
[2026-01-09 21:12:31] 2026-01-10 02:12:02,671 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:12:31] 2026-01-10 02:12:03,088 | INFO     | monitor loop #415: job 0:6962318758 is in state 'finished'
[2026-01-09 21:12:31] 2026-01-10 02:12:03,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:31] 2026-01-10 02:12:03,401 | INFO     | time since job start (5566s) is within the limit (174528.0s)
[2026-01-09 21:12:31] 2026-01-10 02:12:05,407 | INFO     | time since job start (5568s) is within the limit (174528.0s)
[2026-01-09 21:12:31] 2026-01-10 02:12:05,592 | INFO     | monitor loop #416: job 0:6962318758 is in state 'finished'
[2026-01-09 21:12:31] 2026-01-10 02:12:05,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,185 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 21:12:31] 2026-01-10 02:12:07,187 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1817.75
[2026-01-09 21:12:31] 2026-01-10 02:12:07,189 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962318758/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,189 | INFO     | extracted standard info from prmon json
[2026-01-09 21:12:31] 2026-01-10 02:12:07,190 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:12:31] 2026-01-10 02:12:07,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:12:31] 2026-01-10 02:12:07,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:12:31] 2026-01-10 02:12:07,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:12:31] 2026-01-10 02:12:07,192 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:12:31] 2026-01-10 02:12:07,192 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,192 | INFO     | sum of deviations: -13033345583.0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,192 | INFO     | mean x: 1768008421.5
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | mean y: 2799934.119047619
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | intersect: 125399328000.98256
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | chi2: 0.06555319297743858
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | current memory leak: -70.93 B/s (using 84 data points, chi2=0.07)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | could have reported an average CPU frequency of 2145 MHz (7 samples)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,193 | INFO     | ..............................
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . Timing measurements:
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . get job = 0 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . initial setup = 2 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . payload setup = 6 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . stage-in = 0 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . payload execution = 5535 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . stage-out = 0 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | . log creation = 0 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,194 | INFO     | ..............................
[2026-01-09 21:12:31] 2026-01-10 02:12:07,413 | INFO     | time since job start (5570s) is within the limit (174528.0s)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,604 | INFO     | 
[2026-01-09 21:12:31] 2026-01-10 02:12:07,604 | INFO     | job summary report
[2026-01-09 21:12:31] 2026-01-10 02:12:07,604 | INFO     | --------------------------------------------------
[2026-01-09 21:12:31] 2026-01-10 02:12:07,604 | INFO     | PanDA job id: 6962318758
[2026-01-09 21:12:31] 2026-01-10 02:12:07,604 | INFO     | task id: 47898826
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | errors: (none)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | pilot state: finished 
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | transexitcode: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | exeerrorcode: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | exeerrordiag: 
[2026-01-09 21:12:31] 2026-01-10 02:12:07,605 | INFO     | exitcode: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | exitmsg: OK
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | cpuconsumptiontime: 61808 s
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | nevents: 400
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | neventsw: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | pid: 22470
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | pgrp: 22470
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | corecount: 12
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | event service: False
[2026-01-09 21:12:31] 2026-01-10 02:12:07,606 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 5546: 2310842, 5547: 2319840, 5548: 2319924, 5555: 2320246}
[2026-01-09 21:12:31] 2026-01-10 02:12:07,607 | INFO     | --------------------------------------------------
[2026-01-09 21:12:31] 2026-01-10 02:12:07,607 | INFO     | 
[2026-01-09 21:12:31] 2026-01-10 02:12:07,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:12:31] 2026-01-10 02:12:07,629 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | job 6962318758 has completed (purged errors)
[2026-01-09 21:12:31] 2026-01-10 02:12:07,632 | INFO     | overall cleanup function is called
[2026-01-09 21:12:31] 2026-01-10 02:12:08,638 | INFO     | --- collectZombieJob: --- 10, [22470]
[2026-01-09 21:12:31] 2026-01-10 02:12:08,638 | INFO     | zombie collector waiting for pid 22470
[2026-01-09 21:12:31] 2026-01-10 02:12:08,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:12:31] 2026-01-10 02:12:08,638 | INFO     | collected zombie processes
[2026-01-09 21:12:31] 2026-01-10 02:12:08,639 | INFO     | will attempt to kill all subprocesses of pid=22470
[2026-01-09 21:12:31] 2026-01-10 02:12:08,726 | INFO     | process IDs to be killed: [22470] (in reverse order)
[2026-01-09 21:12:31] 2026-01-10 02:12:08,782 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:12:31] 2026-01-10 02:12:08,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:12:31] 2026-01-10 02:12:08,786 | INFO     | did not find any defunct processes belonging to 22470
[2026-01-09 21:12:31] 2026-01-10 02:12:08,788 | INFO     | did not find any defunct processes belonging to 22470
[2026-01-09 21:12:31] 2026-01-10 02:12:08,788 | INFO     | ready for new job
[2026-01-09 21:12:31] 2026-01-10 02:12:08,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:12:31] 2026-01-10 02:12:08,789 | INFO     | ***************************************
[2026-01-09 21:12:31] 2026-01-10 02:12:08,790 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:12:31] 2026-01-10 02:12:08,790 | INFO     | ***************************************
[2026-01-09 21:12:31] 2026-01-10 02:12:08,790 | INFO     | 
[2026-01-09 21:12:31] 2026-01-10 02:12:08,790 | INFO     | architecture information:
[2026-01-09 21:12:31] 2026-01-10 02:12:08,791 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:12:31] 2026-01-10 02:12:08,804 | INFO     | cat /etc/os-release:
[2026-01-09 21:12:31] NAME="CentOS Linux"
[2026-01-09 21:12:31] VERSION="7 (Core)"
[2026-01-09 21:12:31] ID="centos"
[2026-01-09 21:12:31] ID_LIKE="rhel fedora"
[2026-01-09 21:12:31] VERSION_ID="7"
[2026-01-09 21:12:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:12:31] ANSI_COLOR="0;31"
[2026-01-09 21:12:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:12:31] HOME_URL="https://www.centos.org/"
[2026-01-09 21:12:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:12:31] 
[2026-01-09 21:12:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:12:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:12:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:12:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:12:31] 
[2026-01-09 21:12:31] 2026-01-10 02:12:08,805 | INFO     | ***************************************
[2026-01-09 21:12:31] 2026-01-10 02:12:09,307 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:12:31] 2026-01-10 02:12:09,323 | INFO     | sufficient remaining disk space (18531483648 B)
[2026-01-09 21:12:31] 2026-01-10 02:12:09,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:12:31] 2026-01-10 02:12:09,324 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:12:31] 2026-01-10 02:12:09,324 | INFO     | update_server=False
[2026-01-09 21:12:31] 2026-01-10 02:12:09,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:12:31] 2026-01-10 02:12:09,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:31] 2026-01-10 02:12:09,324 | INFO     | aborting loop
[2026-01-09 21:12:31] 2026-01-10 02:12:09,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 21:12:31] 2026-01-10 02:12:09,325 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:12:31] 2026-01-10 02:12:09,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:12:31] 2026-01-10 02:12:09,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:12:31] 2026-01-10 02:12:09,559 | INFO     | all job control threads have been joined
[2026-01-09 21:12:31] 2026-01-10 02:12:09,790 | INFO     | all payload control threads have been joined
[2026-01-09 21:12:31] 2026-01-10 02:12:10,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:12:31] 2026-01-10 02:12:10,215 | INFO     | all data control threads have been joined
[2026-01-09 21:12:31] 2026-01-10 02:12:10,324 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,329 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,455 | INFO     | [job] validate thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,564 | INFO     | [job] control thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,566 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,796 | INFO     | [payload] control thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,859 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:10,989 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:11,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:12:31] 2026-01-10 02:12:11,018 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:11,220 | INFO     | [data] control thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:11,627 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:11,717 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:12,118 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:12,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:31] 2026-01-10 02:12:13,282 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:15,023 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:19,730 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:12:31] 2026-01-10 02:12:20,735 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:12:31] 2026-01-10 02:12:25,418 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:12:31] 2026-01-10 02:12:25,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266065348416)>', '<ExcThread(monitor, started 140264958056192)>']
[2026-01-09 21:12:31] 2026-01-10 02:12:26,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:12:31] 2026-01-10 02:12:26,397 | INFO     | [monitor] control thread has ended
[2026-01-09 21:12:31] 2026-01-10 02:12:30,801 | INFO     | all workflow threads have been joined
[2026-01-09 21:12:31] 2026-01-10 02:12:30,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:12:31] 2026-01-10 02:12:30,808 | INFO     | traces error code: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:30,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:12:31] 2026-01-10 02:12:30,894 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:12:31] 2026-01-10 02:12:30,897 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:12:31] 2026-01-10 02:12:30,900 [wrapper] pilotpid: 16078
[2026-01-09 21:12:31] 2026-01-10 02:12:30,904 [wrapper] Pilot exit status: 0
[2026-01-09 21:12:31] 2026-01-10 02:12:30,918 [wrapper] pandaids: 6962318758
[2026-01-09 21:12:31] 2026-01-10 02:12:30,954 [wrapper] cleanup supervisor_pilot 32153 16079
[2026-01-09 21:12:31] 2026-01-10 02:12:30,957 [wrapper] Test setup, not cleaning
[2026-01-09 21:12:31] 2026-01-10 02:12:30,961 [wrapper] apfmon messages muted
[2026-01-09 21:12:31] 2026-01-10 02:12:30,965 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:12:31] 2026-01-10 02:12:30,969 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:12:31]  *** Error codes and diagnostics ***
[2026-01-09 21:12:31]     "exeErrorCode": 0,
[2026-01-09 21:12:31]     "exeErrorDiag": "",
[2026-01-09 21:12:31]     "pilotErrorCode": 0,
[2026-01-09 21:12:31]     "pilotErrorDiag": "",
[2026-01-09 21:12:31]  *** Listing of results directory ***
[2026-01-09 21:12:31] total 444352
[2026-01-09 21:12:31] -rwx------ 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 16:02 queuedata.json
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas       100 Jan  9 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:12:31] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 19:39 run_atlas
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas       105 Jan  9 19:39 job.xml
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas 225719178 Jan  9 19:39 EVNT.47898824._000561.pool.root.1
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 19:39 start_atlas.sh
[2026-01-09 21:12:31] drwxrwx--x 2 boincer umatlas      4096 Jan  9 19:39 shared
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 19:39 input.tar.gz
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas         0 Jan  9 19:39 boinc_lockfile
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 19:39 pandaJob.out
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas        57 Jan  9 19:39 setup.sh.local
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas    989374 Jan  9 19:39 agis_schedconf.cvmfs.json
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas   1516240 Jan  9 19:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:12:31] drwx------ 5 boincer umatlas      4096 Jan  9 19:39 pilot3
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas 222965296 Jan  9 21:11 HITS.47898826._013087.pool.root.1
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas        95 Jan  9 21:11 pilot_heartbeat.json
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas       529 Jan  9 21:11 boinc_task_state.xml
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas      1046 Jan  9 21:11 memory_monitor_summary.json
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas    409548 Jan  9 21:11 log.47898826._013087.job.log.tgz.1
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas      7854 Jan  9 21:12 heartbeat.json
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas      5954 Jan  9 21:12 init_data.xml
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 21:12 boinc_mmap_file
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas        27 Jan  9 21:12 wrapper_checkpoint.txt
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas      4624 Jan  9 21:12 pilotlog.txt
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas    798906 Jan  9 21:12 log.47898826._013087.job.log.1
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas       357 Jan  9 21:12 output.list
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas       620 Jan  9 21:12 runtime_log
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas   1228800 Jan  9 21:12 result.tar.gz
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 21:12 runtime_log.err
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas       659 Jan  9 21:12 bhrMDmgnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtoiKDmCxJCIm.diag
[2026-01-09 21:12:31] -rw-r--r-- 1 boincer umatlas     22393 Jan  9 21:12 stderr.txt
[2026-01-09 21:12:31] HITS file was successfully produced:
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas 222965296 Jan  9 21:11 shared/HITS.pool.root.1
[2026-01-09 21:12:31]  *** Contents of shared directory: ***
[2026-01-09 21:12:31] total 439972
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas 225719178 Jan  9 19:39 ATLAS.root_0
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 19:39 start_atlas.sh
[2026-01-09 21:12:31] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 19:39 input.tar.gz
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas 222965296 Jan  9 21:11 HITS.pool.root.1
[2026-01-09 21:12:31] -rw------- 1 boincer umatlas   1228800 Jan  9 21:12 result.tar.gz
21:12:32 (12283): run_atlas exited; CPU time 61768.286118
21:12:32 (12283): called boinc_finish(0)

</stderr_txt>
]]>

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