Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:21:04 (463955): wrapper (7.7.26015): starting
01:21:04 (463955): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 01:21:04] Arguments: --nthreads 4
[2026-01-10 01:21:04] Threads: 4
[2026-01-10 01:21:04] Checking for CVMFS
[2026-01-10 01:21:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:21:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:21:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:21:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:21:04] 2.13.3.0 7052 1666 75088 154974 3 253 3057629 6144001 13089 130560 0 12668851 99.998 57764 817 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 01:21:04] CVMFS is ok
[2026-01-10 01:21:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:21:04] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 01:21:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 01:21:04] Further information can be found at the LHC@home message board.
[2026-01-10 01:21:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:21:04] Checking for apptainer binary...
[2026-01-10 01:21:04] apptainer is not installed, using version from CVMFS
[2026-01-10 01:21:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:21:04] p8
[2026-01-10 01:21:04] apptainer works
[2026-01-10 01:21:04] Set ATHENA_PROC_NUMBER=4
[2026-01-10 01:21:04] Set ATHENA_CORE_NUMBER=4
[2026-01-10 01:21:04] Starting ATLAS job with PandaID=6962313498
[2026-01-10 01:21:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/data/boinc-0/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:19:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:19:29] 2026-01-10 11:18:51,323 | INFO     | this job has now completed (state=finished)
[2026-01-10 03:19:29] 2026-01-10 11:18:51,323 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 03:19:29] 2026-01-10 11:18:51,323 | INFO     | log transfer has been attempted: DONE
[2026-01-10 03:19:29] 2026-01-10 11:18:51,323 | INFO     | job 6962313498 has finished - writing final server update
[2026-01-10 03:19:29] 2026-01-10 11:18:51,323 | INFO     | total number of processed events: 400 (read)
[2026-01-10 03:19:29] 2026-01-10 11:18:51,324 | INFO     | executing command: lscpu
[2026-01-10 03:19:29] 2026-01-10 11:18:51,342 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 03:19:29] 2026-01-10 11:18:51,588 | INFO     | time since job start (7060s) is within the limit (174528.0s)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,820 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 03:19:29] 2026-01-10 11:18:52,824 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 4231.555281249999
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | INFO     | using path: /mnt/data/boinc-0/slots/12/PanDA_Pilot-6962313498/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | INFO     | extracted standard info from prmon json
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:19:29] 2026-01-10 11:18:52,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | sum of deviations: 6517817365.000005
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | mean x: 1768040396.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | mean y: 2336526.724137931
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | intersect: -23808478174.93046
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | chi2: 1.1119902311100418
[2026-01-10 03:19:29] 2026-01-10 11:18:52,831 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | sum of deviations: 6240142741.999997
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | mean x: 1768040244.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | mean y: 2335817.6756756757
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | intersect: -26015703148.17528
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | chi2: 1.1135365237039203
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | current chi2=1.1135365237039203 (change=-0.1390563109834988 %)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | right removable region: 110
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | sum of deviations: -4408946532.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | mean x: 1768040549.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | mean y: 2363541.4414414414
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | intersect: 18385302393.87151
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | chi2: 0.007672529013427097
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | current chi2=0.007672529013427097 (change=99.31001830782559 %)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,832 | INFO     | sum of square deviations: 369281342.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | sum of deviations: -3934434852.0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | mean x: 1768040701.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | mean y: 2362220.3396226414
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | intersect: 18839601352.549854
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | chi2: 0.00763640105755538
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | current chi2=0.00763640105755538 (change=0.4708741512543322 %)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | left removable region: 20
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | sum of square deviations: 226022842.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | sum of deviations: -3053969910.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | mean x: 1768040823.5
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | mean y: 2360298.8333333335
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | intersect: 23891731018.09876
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | chi2: 0.006619342752285366
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | current memory leak: -13.51 B/s (using 90 data points, chi2=0.01)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,833 | INFO     | could have reported an average CPU frequency of 4393 MHz (7 samples)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | ..............................
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . Timing measurements:
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . get job = 0 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . initial setup = 2 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . payload setup = 2 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . stage-in = 0 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . payload execution = 7038 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . stage-out = 0 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | . log creation = 0 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,834 | INFO     | ..............................
[2026-01-10 03:19:29] 2026-01-10 11:18:52,879 | INFO     | 
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | job summary report
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | --------------------------------------------------
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | PanDA job id: 6962313498
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | task id: 47898826
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | errors: (none)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | pilot state: finished 
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | transexitcode: 0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | exeerrorcode: 0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | exeerrordiag: 
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | exitcode: 0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | exitmsg: OK
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | cpuconsumptiontime: 27209 s
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | nevents: 400
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | neventsw: 0
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | pid: 474853
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | pgrp: 474853
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | corecount: 4
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | event service: False
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | sizes: {0: 2283968, 2: 2284230, 11: 2284258, 7044: 2311634, 7046: 2320696, 7049: 2320834}
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | --------------------------------------------------
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | 
[2026-01-10 03:19:29] 2026-01-10 11:18:52,880 | INFO     | executing command: ls -lF /mnt/data/boinc-0/slots/12
[2026-01-10 03:19:29] 2026-01-10 11:18:52,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | job 6962313498 has completed (purged errors)
[2026-01-10 03:19:29] 2026-01-10 11:18:52,896 | INFO     | overall cleanup function is called
[2026-01-10 03:19:29] 2026-01-10 11:18:53,903 | INFO     | --- collectZombieJob: --- 10, [474853]
[2026-01-10 03:19:29] 2026-01-10 11:18:53,903 | INFO     | zombie collector waiting for pid 474853
[2026-01-10 03:19:29] 2026-01-10 11:18:53,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:19:29] 2026-01-10 11:18:53,903 | INFO     | collected zombie processes
[2026-01-10 03:19:29] 2026-01-10 11:18:53,903 | INFO     | will attempt to kill all subprocesses of pid=474853
[2026-01-10 03:19:29] 2026-01-10 11:18:54,003 | INFO     | process IDs to be killed: [474853] (in reverse order)
[2026-01-10 03:19:29] 2026-01-10 11:18:54,045 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:19:29] 2026-01-10 11:18:54,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:19:29] 2026-01-10 11:18:54,049 | INFO     | did not find any defunct processes belonging to 474853
[2026-01-10 03:19:29] 2026-01-10 11:18:54,052 | INFO     | did not find any defunct processes belonging to 474853
[2026-01-10 03:19:29] 2026-01-10 11:18:54,052 | INFO     | ready for new job
[2026-01-10 03:19:29] 2026-01-10 11:18:54,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:19:29] 2026-01-10 11:18:54,053 | INFO     | ***************************************
[2026-01-10 03:19:29] 2026-01-10 11:18:54,053 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:19:29] 2026-01-10 11:18:54,053 | INFO     | ***************************************
[2026-01-10 03:19:29] 2026-01-10 11:18:54,053 | INFO     | 
[2026-01-10 03:19:29] 2026-01-10 11:18:54,054 | INFO     | architecture information:
[2026-01-10 03:19:29] 2026-01-10 11:18:54,054 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:19:29] 2026-01-10 11:18:54,063 | INFO     | cat /etc/os-release:
[2026-01-10 03:19:29] NAME="CentOS Linux"
[2026-01-10 03:19:29] VERSION="7 (Core)"
[2026-01-10 03:19:29] ID="centos"
[2026-01-10 03:19:29] ID_LIKE="rhel fedora"
[2026-01-10 03:19:29] VERSION_ID="7"
[2026-01-10 03:19:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:19:29] ANSI_COLOR="0;31"
[2026-01-10 03:19:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:19:29] HOME_URL="https://www.centos.org/"
[2026-01-10 03:19:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:19:29] 
[2026-01-10 03:19:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:19:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:19:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:19:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:19:29] 
[2026-01-10 03:19:29] 2026-01-10 11:18:54,063 | INFO     | ***************************************
[2026-01-10 03:19:29] 2026-01-10 11:18:54,566 | INFO     | executing command: df -mP /mnt/data/boinc-0/slots/12
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | INFO     | sufficient remaining disk space (348897935360 B)
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | INFO     | update_server=False
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:19:29] 2026-01-10 11:18:54,575 | INFO     | aborting loop
[2026-01-10 03:19:29] 2026-01-10 11:18:54,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:19:29] 2026-01-10 11:18:54,723 | INFO     | all data control threads have been joined
[2026-01-10 03:19:29] 2026-01-10 11:18:54,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:19:29] 2026-01-10 11:18:55,426 | INFO     | all job control threads have been joined
[2026-01-10 03:19:29] 2026-01-10 11:18:55,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:19:29] 2026-01-10 11:18:55,580 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:55,581 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:55,581 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:55,714 | INFO     | all payload control threads have been joined
[2026-01-10 03:19:29] 2026-01-10 11:18:55,728 | INFO     | [data] control thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,032 | INFO     | [job] validate thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,242 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,321 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,431 | INFO     | [job] control thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,491 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,719 | INFO     | [payload] control thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,880 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:56,981 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:57,117 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:18:59,526 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:19:04,993 | INFO     | job.realtimelogging is not enabled
[2026-01-10 03:19:29] 2026-01-10 11:19:05,998 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:19:29] 2026-01-10 11:19:22,782 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:19:29] 2026-01-10 11:19:23,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902592145216)>', '<ExcThread(monitor, started 139901756491520)>']
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | INFO     | PID=467918 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | INFO     | .. there are 7 such processes running
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:19:29] 2026-01-10 11:19:24,776 | INFO     | [monitor] control thread has ended
[2026-01-10 03:19:29] 2026-01-10 11:19:28,980 | INFO     | all workflow threads have been joined
[2026-01-10 03:19:29] 2026-01-10 11:19:28,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:19:29] 2026-01-10 11:19:28,980 | INFO     | traces error code: 0
[2026-01-10 03:19:29] 2026-01-10 11:19:28,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:19:29] 2026-01-10 11:19:29,038 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:19:29] 2026-01-10 11:19:29,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:19:29] 2026-01-10 11:19:29,041 [wrapper] pilotpid: 467918
[2026-01-10 03:19:29] 2026-01-10 11:19:29,042 [wrapper] Pilot exit status: 0
[2026-01-10 03:19:29] 2026-01-10 11:19:29,048 [wrapper] pandaids: 6962313498
[2026-01-10 03:19:29] 2026-01-10 11:19:29,070 [wrapper] cleanup supervisor_pilot  675011 467919
[2026-01-10 03:19:29] 2026-01-10 11:19:29,072 [wrapper] Test setup, not cleaning
[2026-01-10 03:19:29] 2026-01-10 11:19:29,074 [wrapper] apfmon messages muted
[2026-01-10 03:19:29] 2026-01-10 11:19:29,075 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:19:29] 2026-01-10 11:19:29,075 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:19:29]  *** Error codes and diagnostics ***
[2026-01-10 03:19:29]     "exeErrorCode": 0,
[2026-01-10 03:19:29]     "exeErrorDiag": "",
[2026-01-10 03:19:29]     "pilotErrorCode": 0,
[2026-01-10 03:19:29]     "pilotErrorDiag": "",
[2026-01-10 03:19:29]  *** Listing of results directory ***
[2026-01-10 03:19:29] total 439316
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc    579449 Jan  7 12:49 pilot3.tar.gz
[2026-01-10 03:19:29] -rwx------ 1 boinc boinc     36322 Jan  7 12:53 runpilot2-wrapper.sh
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc      5112 Jan  7 12:53 queuedata.json
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc       100 Jan 10 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:19:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 01:21 run_atlas
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc       105 Jan 10 01:21 job.xml
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc 223449688 Jan 10 01:21 EVNT.47898824._000575.pool.root.1
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc    592396 Jan 10 01:21 input.tar.gz
[2026-01-10 03:19:29] drwxrwx--x 2 boinc boinc      4096 Jan 10 01:21 shared
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:21 start_atlas.sh
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:21 boinc_setup_complete
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc     10143 Jan 10 01:21 init_data.xml
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:21 boinc_lockfile
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc      2516 Jan 10 01:21 pandaJob.out
[2026-01-10 03:19:29] -rw------- 1 boinc boinc    989548 Jan 10 01:21 agis_schedconf.cvmfs.json
[2026-01-10 03:19:29] -rw------- 1 boinc boinc   1516240 Jan 10 01:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:19:29] drwx------ 5 boinc boinc      4096 Jan 10 01:21 pilot3
[2026-01-10 03:19:29] -rw------- 1 boinc boinc 219828527 Jan 10 03:18 HITS.47898826._010800.pool.root.1
[2026-01-10 03:19:29] -rw------- 1 boinc boinc        95 Jan 10 03:18 pilot_heartbeat.json
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc       529 Jan 10 03:18 boinc_task_state.xml
[2026-01-10 03:19:29] -rw------- 1 boinc boinc      1040 Jan 10 03:18 memory_monitor_summary.json
[2026-01-10 03:19:29] -rw------- 1 boinc boinc    295899 Jan 10 03:18 log.47898826._010800.job.log.tgz.1
[2026-01-10 03:19:29] -rw------- 1 boinc boinc      7761 Jan 10 03:18 heartbeat.json
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc      8192 Jan 10 03:19 boinc_mmap_file
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc        27 Jan 10 03:19 wrapper_checkpoint.txt
[2026-01-10 03:19:29] -rw------- 1 boinc boinc      4899 Jan 10 03:19 pilotlog.txt
[2026-01-10 03:19:29] -rw------- 1 boinc boinc   1032015 Jan 10 03:19 log.47898826._010800.job.log.1
[2026-01-10 03:19:29] -rw------- 1 boinc boinc       357 Jan 10 03:19 output.list
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc       620 Jan 10 03:19 runtime_log
[2026-01-10 03:19:29] -rw------- 1 boinc boinc   1351680 Jan 10 03:19 result.tar.gz
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc      8840 Jan 10 03:19 runtime_log.err
[2026-01-10 03:19:29] -rw------- 1 boinc boinc       646 Jan 10 03:19 jzkLDm5hpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSWiKDmXEhQFo.diag
[2026-01-10 03:19:29] -rw-r--r-- 1 boinc boinc     21323 Jan 10 03:19 stderr.txt
[2026-01-10 03:19:29] HITS file was successfully produced:
[2026-01-10 03:19:29] -rw------- 1 boinc boinc 219828527 Jan 10 03:18 shared/HITS.pool.root.1
[2026-01-10 03:19:29]  *** Contents of shared directory: ***
[2026-01-10 03:19:29] total 434820
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc 223449688 Jan 10 01:21 ATLAS.root_0
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc    592396 Jan 10 01:21 input.tar.gz
[2026-01-10 03:19:29] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:21 start_atlas.sh
[2026-01-10 03:19:29] -rw------- 1 boinc boinc 219828527 Jan 10 03:18 HITS.pool.root.1
[2026-01-10 03:19:29] -rw------- 1 boinc boinc   1351680 Jan 10 03:19 result.tar.gz
03:19:31 (463955): run_atlas exited; CPU time 27312.317642
03:19:31 (463955): called boinc_finish(0)

</stderr_txt>
]]>

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