Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:26:57 (485510): wrapper (7.7.26015): starting
01:26:57 (485510): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 01:26:57] Arguments: --nthreads 4
[2026-01-10 01:26:57] Threads: 4
[2026-01-10 01:26:57] Checking for CVMFS
[2026-01-10 01:26:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:26:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:26:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:26:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:26:58] 2.13.3.0 7052 1672 65644 154974 1 253 3057629 6144001 13269 130560 0 12739612 99.998 57765 815 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 01:26:58] CVMFS is ok
[2026-01-10 01:26:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:26:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 01:26:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 01:26:58] Further information can be found at the LHC@home message board.
[2026-01-10 01:26:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:26:58] Checking for apptainer binary...
[2026-01-10 01:26:58] apptainer is not installed, using version from CVMFS
[2026-01-10 01:26:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:26:58] p8
[2026-01-10 01:26:58] apptainer works
[2026-01-10 01:26:58] Set ATHENA_PROC_NUMBER=4
[2026-01-10 01:26:58] Set ATHENA_CORE_NUMBER=4
[2026-01-10 01:26:58] Starting ATLAS job with PandaID=6963078463
[2026-01-10 01:26:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/data/boinc-0/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:24:23]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:24:23] 2026-01-10 11:23:27,281 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 4321.632062499999
[2026-01-10 03:24:23] 2026-01-10 11:23:27,283 | INFO     | sufficient remaining disk space (349778739200 B)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,284 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,285 | INFO     | size of work directory /mnt/data/boinc-0/slots/5/PanDA_Pilot-6963078463: 3071503 B (within 4404019200 B limit)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,286 | INFO     | pfn file=/mnt/data/boinc-0/slots/5/PanDA_Pilot-6963078463/HITS.47898826._024622.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,286 | INFO     | total size of present files: 0 B (workdir size: 3071503 B)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,286 | INFO     | output file size check: skipping output file /mnt/data/boinc-0/slots/5/PanDA_Pilot-6963078463/HITS.47898826._024622.pool.root.1 since it does not exist
[2026-01-10 03:24:23] 2026-01-10 11:23:27,287 | INFO     | using path: /mnt/data/boinc-0/slots/5/PanDA_Pilot-6963078463/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,288 | INFO     | extracted standard info from prmon json
[2026-01-10 03:24:23] 2026-01-10 11:23:27,288 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:24:23] 2026-01-10 11:23:27,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:24:23] 2026-01-10 11:23:27,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:24:23] 2026-01-10 11:23:27,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:24:23] 2026-01-10 11:23:27,289 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | sum of square deviations: 459366752.5
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | sum of deviations: 6696136011.500001
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | mean x: 1768040690.5
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | mean y: 2326135.535087719
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | intersect: -25770198482.372208
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | chi2: 1.1023301168601507
[2026-01-10 03:24:23] 2026-01-10 11:23:27,290 | INFO     | sum of square deviations: 401533110.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | sum of deviations: 6223581729.999998
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | mean x: 1768040538.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | mean y: 2324892.0642201835
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | intersect: -27401504371.7197
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | chi2: 1.103647156574296
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | current chi2=1.103647156574296 (change=-0.11947779471876728 %)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | right removable region: 108
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | sum of square deviations: 401533110.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | sum of deviations: -3764639156.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | mean x: 1768040843.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | mean y: 2352892.0825688075
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | intersect: 16578908152.905392
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | chi2: 0.008576276168870448
[2026-01-10 03:24:23] 2026-01-10 11:23:27,291 | INFO     | current chi2=0.008576276168870448 (change=99.22198658662263 %)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | sum of square deviations: 348769330.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | sum of deviations: -3495922962.4999995
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | mean x: 1768040995.5
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | mean y: 2352110.855769231
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | intersect: 17724481275.165623
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | chi2: 0.00836962283293501
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | current chi2=0.00836962283293501 (change=2.4095928333736962 %)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | left removable region: 20
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | sum of square deviations: 211285822.0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | sum of deviations: -2608015990.4999995
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | mean x: 1768041117.5
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | mean y: 2348726.9204545454
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | intersect: 21826243310.35109
[2026-01-10 03:24:23] 2026-01-10 11:23:27,292 | INFO     | chi2: 0.00698644149832684
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | current memory leak: -12.34 B/s (using 88 data points, chi2=0.01)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | could have reported an average CPU frequency of 4397 MHz (7 samples)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | ..............................
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . Timing measurements:
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . get job = 0 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . initial setup = 3 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . payload setup = 2 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . stage-in = 0 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . payload execution = 6956 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . stage-out = 0 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | . log creation = 0 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,293 | INFO     | ..............................
[2026-01-10 03:24:23] 2026-01-10 11:23:27,341 | INFO     | 
[2026-01-10 03:24:23] 2026-01-10 11:23:27,341 | INFO     | job summary report
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | --------------------------------------------------
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | PanDA job id: 6963078463
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | task id: 47898826
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | errors: (none)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | pilot state: finished 
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | transexitcode: 0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | exeerrorcode: 0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | exeerrordiag: 
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | exitcode: 0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | exitmsg: OK
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | cpuconsumptiontime: 27065 s
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | nevents: 400
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | neventsw: 0
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | pid: 498598
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | pgrp: 498598
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | corecount: 4
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | event service: False
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | sizes: {0: 2283972, 2: 2284234, 11: 2284262, 6962: 2311583, 6963: 2320587, 6964: 2320643, 6968: 2320993}
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | --------------------------------------------------
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | 
[2026-01-10 03:24:23] 2026-01-10 11:23:27,342 | INFO     | executing command: ls -lF /mnt/data/boinc-0/slots/5
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,354 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:24:23] 2026-01-10 11:23:27,355 | INFO     | job 6963078463 has completed (purged errors)
[2026-01-10 03:24:23] 2026-01-10 11:23:27,358 | INFO     | overall cleanup function is called
[2026-01-10 03:24:23] 2026-01-10 11:23:27,435 | INFO     | number of running child processes to parent process 498598: 1
[2026-01-10 03:24:23] 2026-01-10 11:23:27,435 | INFO     | maximum number of monitored processes: 6
[2026-01-10 03:24:23] 2026-01-10 11:23:27,435 | INFO     | aborting job monitoring since job object (job id=6963078463) has expired
[2026-01-10 03:24:23] 2026-01-10 11:23:28,364 | INFO     | --- collectZombieJob: --- 10, [498598]
[2026-01-10 03:24:23] 2026-01-10 11:23:28,364 | INFO     | zombie collector waiting for pid 498598
[2026-01-10 03:24:23] 2026-01-10 11:23:28,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:24:23] 2026-01-10 11:23:28,364 | INFO     | collected zombie processes
[2026-01-10 03:24:23] 2026-01-10 11:23:28,364 | INFO     | will attempt to kill all subprocesses of pid=498598
[2026-01-10 03:24:23] 2026-01-10 11:23:28,436 | INFO     | process IDs to be killed: [498598] (in reverse order)
[2026-01-10 03:24:23] 2026-01-10 11:23:28,482 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:24:23] 2026-01-10 11:23:28,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:24:23] 2026-01-10 11:23:28,486 | INFO     | did not find any defunct processes belonging to 498598
[2026-01-10 03:24:23] 2026-01-10 11:23:28,489 | INFO     | did not find any defunct processes belonging to 498598
[2026-01-10 03:24:23] 2026-01-10 11:23:28,490 | INFO     | ready for new job
[2026-01-10 03:24:23] 2026-01-10 11:23:28,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:24:23] 2026-01-10 11:23:28,491 | INFO     | ***************************************
[2026-01-10 03:24:23] 2026-01-10 11:23:28,491 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:24:23] 2026-01-10 11:23:28,491 | INFO     | ***************************************
[2026-01-10 03:24:23] 2026-01-10 11:23:28,491 | INFO     | 
[2026-01-10 03:24:23] 2026-01-10 11:23:28,492 | INFO     | architecture information:
[2026-01-10 03:24:23] 2026-01-10 11:23:28,492 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:24:23] 2026-01-10 11:23:28,501 | INFO     | cat /etc/os-release:
[2026-01-10 03:24:23] NAME="CentOS Linux"
[2026-01-10 03:24:23] VERSION="7 (Core)"
[2026-01-10 03:24:23] ID="centos"
[2026-01-10 03:24:23] ID_LIKE="rhel fedora"
[2026-01-10 03:24:23] VERSION_ID="7"
[2026-01-10 03:24:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:24:23] ANSI_COLOR="0;31"
[2026-01-10 03:24:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:24:23] HOME_URL="https://www.centos.org/"
[2026-01-10 03:24:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:24:23] 
[2026-01-10 03:24:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:24:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:24:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:24:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:24:23] 
[2026-01-10 03:24:23] 2026-01-10 11:23:28,501 | INFO     | ***************************************
[2026-01-10 03:24:23] 2026-01-10 11:23:29,004 | INFO     | executing command: df -mP /mnt/data/boinc-0/slots/5
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | INFO     | sufficient remaining disk space (349782933504 B)
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | INFO     | update_server=False
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:24:23] 2026-01-10 11:23:29,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:24:23] 2026-01-10 11:23:29,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:24:23] 2026-01-10 11:23:29,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:24:23] 2026-01-10 11:23:29,020 | INFO     | aborting loop
[2026-01-10 03:24:23] 2026-01-10 11:23:29,201 | INFO     | all job control threads have been joined
[2026-01-10 03:24:23] 2026-01-10 11:23:29,391 | INFO     | all data control threads have been joined
[2026-01-10 03:24:23] 2026-01-10 11:23:29,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:24:23] 2026-01-10 11:23:29,973 | INFO     | all payload control threads have been joined
[2026-01-10 03:24:23] 2026-01-10 11:23:30,024 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,025 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,025 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,206 | INFO     | [job] control thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,207 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,396 | INFO     | [data] control thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,601 | INFO     | [job] validate thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,687 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,763 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,795 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:30,978 | INFO     | [payload] control thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:31,164 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:31,214 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:31,640 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:33,025 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:39,777 | INFO     | job.realtimelogging is not enabled
[2026-01-10 03:24:23] 2026-01-10 11:23:40,782 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:24:23] 2026-01-10 11:23:59,153 | INFO     | PID=489481 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 03:24:23] 2026-01-10 11:23:59,154 | INFO     | .. there are 5 such processes running
[2026-01-10 03:24:23] 2026-01-10 11:23:59,154 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:24:23] 2026-01-10 11:23:59,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:24:23] 2026-01-10 11:23:59,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:24:23] 2026-01-10 11:24:16,959 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:24:23] 2026-01-10 11:24:17,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128582827632448)>', '<ExcThread(monitor, started 128581766203136)>']
[2026-01-10 03:24:23] 2026-01-10 11:24:18,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:24:23] 2026-01-10 11:24:18,249 | INFO     | [monitor] control thread has ended
[2026-01-10 03:24:23] 2026-01-10 11:24:22,923 | INFO     | all workflow threads have been joined
[2026-01-10 03:24:23] 2026-01-10 11:24:22,923 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:24:23] 2026-01-10 11:24:22,923 | INFO     | traces error code: 0
[2026-01-10 03:24:23] 2026-01-10 11:24:22,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:24:23] 2026-01-10 11:24:22,984 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:24:23] 2026-01-10 11:24:22,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:24:23] 2026-01-10 11:24:22,987 [wrapper] pilotpid: 489481
[2026-01-10 03:24:23] 2026-01-10 11:24:22,988 [wrapper] Pilot exit status: 0
[2026-01-10 03:24:23] 2026-01-10 11:24:22,993 [wrapper] pandaids: 6963078463
[2026-01-10 03:24:23] 2026-01-10 11:24:23,014 [wrapper] cleanup supervisor_pilot  683071 489482
[2026-01-10 03:24:23] 2026-01-10 11:24:23,017 [wrapper] Test setup, not cleaning
[2026-01-10 03:24:23] 2026-01-10 11:24:23,018 [wrapper] apfmon messages muted
[2026-01-10 03:24:23] 2026-01-10 11:24:23,019 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:24:23] 2026-01-10 11:24:23,021 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:24:23]  *** Error codes and diagnostics ***
[2026-01-10 03:24:23]     "exeErrorCode": 0,
[2026-01-10 03:24:23]     "exeErrorDiag": "",
[2026-01-10 03:24:23]     "pilotErrorCode": 0,
[2026-01-10 03:24:23]     "pilotErrorDiag": "",
[2026-01-10 03:24:23]  *** Listing of results directory ***
[2026-01-10 03:24:23] total 435488
[2026-01-10 03:24:23] -rwx------ 1 boinc boinc     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc      5112 Jan  8 03:09 queuedata.json
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc    579449 Jan  8 03:09 pilot3.tar.gz
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc       100 Jan 10 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:24:23] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 01:26 run_atlas
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc       105 Jan 10 01:26 job.xml
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc 225786035 Jan 10 01:26 EVNT.47898824._000969.pool.root.1
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc    592394 Jan 10 01:26 input.tar.gz
[2026-01-10 03:24:23] drwxrwx--x 2 boinc boinc      4096 Jan 10 01:26 shared
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:26 start_atlas.sh
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:26 boinc_setup_complete
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc     10142 Jan 10 01:26 init_data.xml
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:26 boinc_lockfile
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc      2519 Jan 10 01:26 pandaJob.out
[2026-01-10 03:24:23] -rw------- 1 boinc boinc    989548 Jan 10 01:27 agis_schedconf.cvmfs.json
[2026-01-10 03:24:23] -rw------- 1 boinc boinc   1516240 Jan 10 01:27 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:24:23] drwx------ 5 boinc boinc      4096 Jan 10 01:27 pilot3
[2026-01-10 03:24:23] -rw------- 1 boinc boinc 213592605 Jan 10 03:22 HITS.47898826._024622.pool.root.1
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc       530 Jan 10 03:23 boinc_task_state.xml
[2026-01-10 03:24:23] -rw------- 1 boinc boinc      1028 Jan 10 03:23 memory_monitor_summary.json
[2026-01-10 03:24:23] -rw------- 1 boinc boinc    309588 Jan 10 03:23 log.47898826._024622.job.log.tgz.1
[2026-01-10 03:24:23] -rw------- 1 boinc boinc        95 Jan 10 03:23 pilot_heartbeat.json
[2026-01-10 03:24:23] -rw------- 1 boinc boinc      7763 Jan 10 03:23 heartbeat.json
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc        27 Jan 10 03:24 wrapper_checkpoint.txt
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc      8192 Jan 10 03:24 boinc_mmap_file
[2026-01-10 03:24:23] -rw------- 1 boinc boinc      4898 Jan 10 03:24 pilotlog.txt
[2026-01-10 03:24:23] -rw------- 1 boinc boinc   1010189 Jan 10 03:24 log.47898826._024622.job.log.1
[2026-01-10 03:24:23] -rw------- 1 boinc boinc       357 Jan 10 03:24 output.list
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc       620 Jan 10 03:24 runtime_log
[2026-01-10 03:24:23] -rw------- 1 boinc boinc   1341440 Jan 10 03:24 result.tar.gz
[2026-01-10 03:24:23] -rw------- 1 boinc boinc       645 Jan 10 03:24 qx5MDm722x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIIkKDmKgUP7n.diag
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc      8824 Jan 10 03:24 runtime_log.err
[2026-01-10 03:24:23] -rw-r--r-- 1 boinc boinc     21585 Jan 10 03:24 stderr.txt
[2026-01-10 03:24:23] HITS file was successfully produced:
[2026-01-10 03:24:23] -rw------- 1 boinc boinc 213592605 Jan 10 03:22 shared/HITS.pool.root.1
[2026-01-10 03:24:23]  *** Contents of shared directory: ***
[2026-01-10 03:24:23] total 431000
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc 225786035 Jan 10 01:26 ATLAS.root_0
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc    592394 Jan 10 01:26 input.tar.gz
[2026-01-10 03:24:23] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:26 start_atlas.sh
[2026-01-10 03:24:23] -rw------- 1 boinc boinc 213592605 Jan 10 03:22 HITS.pool.root.1
[2026-01-10 03:24:23] -rw------- 1 boinc boinc   1341440 Jan 10 03:24 result.tar.gz
03:24:24 (485510): run_atlas exited; CPU time 27156.243676
03:24:24 (485510): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN