Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:10:16 (2764234): wrapper (7.7.26015): starting
20:10:16 (2764234): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:10:16] Arguments: --nthreads 8
[2026-01-09 20:10:16] Threads: 8
[2026-01-09 20:10:16] Checking for CVMFS
[2026-01-09 20:10:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:10:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:10:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:10:17] 2.13.3.0 12525 94037 179776 154962 0 646 37290518 40960001 22939 16776704 0 530015179 99.654 495618659 35665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:10:17] CVMFS is ok
[2026-01-09 20:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:10:17] Further information can be found at the LHC@home message board.
[2026-01-09 20:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:10:17] Checking for apptainer binary...
[2026-01-09 20:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:10:17] Running /usr/bin/apptainer --version
[2026-01-09 20:10:17] apptainer version 1.4.5-2.el9
[2026-01-09 20:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:10:17] c7-4-30.aglt2.org
[2026-01-09 20:10:17] apptainer works
[2026-01-09 20:10:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:10:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:10:17] Starting ATLAS job with PandaID=6964539200
[2026-01-09 20:10:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:41:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:41:06] 2026-01-10 04:40:10,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:41:06] 2026-01-10 04:40:11,291 | INFO     | time since job start (12573s) is within the limit (349056.0s)
[2026-01-09 23:41:06] 2026-01-10 04:40:11,291 | INFO     | 12576s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 23:41:06] 2026-01-10 04:40:13,206 | INFO     | monitor loop #820: job 0:6964539200 is in state 'finished'
[2026-01-09 23:41:06] 2026-01-10 04:40:13,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:41:06] 2026-01-10 04:40:13,299 | INFO     | time since job start (12575s) is within the limit (349056.0s)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,416 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:41:06] 2026-01-10 04:40:14,439 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3110.9361458333346
[2026-01-09 23:41:06] 2026-01-10 04:40:14,472 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6964539200/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,477 | INFO     | extracted standard info from prmon json
[2026-01-09 23:41:06] 2026-01-10 04:40:14,477 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:41:06] 2026-01-10 04:40:14,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:41:06] 2026-01-10 04:40:14,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:41:06] 2026-01-10 04:40:14,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:41:06] 2026-01-10 04:40:14,481 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:41:06] 2026-01-10 04:40:14,481 | INFO     | sum of square deviations: 2710610857.422314
[2026-01-09 23:41:06] 2026-01-10 04:40:14,482 | INFO     | sum of deviations: 36258305444.121376
[2026-01-09 23:41:06] 2026-01-10 04:40:14,482 | INFO     | mean x: 1768013730.5194175
[2026-01-09 23:41:06] 2026-01-10 04:40:14,482 | INFO     | mean y: 2508199.344660194
[2026-01-09 23:41:06] 2026-01-10 04:40:14,482 | INFO     | intersect: -23647209610.586594
[2026-01-09 23:41:06] 2026-01-10 04:40:14,483 | INFO     | chi2: 2.9539161184953615
[2026-01-09 23:41:06] 2026-01-10 04:40:14,483 | INFO     | sum of square deviations: 2517985209.9203973
[2026-01-09 23:41:06] 2026-01-10 04:40:14,484 | INFO     | sum of deviations: 48933228439.69652
[2026-01-09 23:41:06] 2026-01-10 04:40:14,484 | INFO     | mean x: 1768013578.0199006
[2026-01-09 23:41:06] 2026-01-10 04:40:14,484 | INFO     | mean y: 2518029.8258706466
[2026-01-09 23:41:06] 2026-01-10 04:40:14,484 | INFO     | intersect: -34356147762.523262
[2026-01-09 23:41:06] 2026-01-10 04:40:14,485 | INFO     | chi2: 2.2483844213610573
[2026-01-09 23:41:06] 2026-01-10 04:40:14,485 | INFO     | current chi2=2.2483844213610573 (change=23.884621933465105 %)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,485 | INFO     | right removable region: 200
[2026-01-09 23:41:06] 2026-01-10 04:40:14,485 | INFO     | sum of square deviations: 2517982769.9203973
[2026-01-09 23:41:06] 2026-01-10 04:40:14,486 | INFO     | sum of deviations: -7295439836.616923
[2026-01-09 23:41:06] 2026-01-10 04:40:14,486 | INFO     | mean x: 1768013883.0199006
[2026-01-09 23:41:06] 2026-01-10 04:40:14,486 | INFO     | mean y: 2542432.154228856
[2026-01-09 23:41:06] 2026-01-10 04:40:14,487 | INFO     | intersect: 5125071095.95558
[2026-01-09 23:41:06] 2026-01-10 04:40:14,487 | INFO     | chi2: 0.9292354971198054
[2026-01-09 23:41:06] 2026-01-10 04:40:14,487 | INFO     | current chi2=0.9292354971198054 (change=68.54225171454326 %)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,487 | INFO     | sum of square deviations: 2334703694.9183707
[2026-01-09 23:41:06] 2026-01-10 04:40:14,488 | INFO     | sum of deviations: -16113700675.908161
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | mean x: 1768014035.5204082
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | mean y: 2549791.852040816
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | intersect: 12205061408.717579
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | chi2: 0.843885063081641
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | current chi2=0.843885063081641 (change=9.185016532699267 %)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | left removable region: 20
[2026-01-09 23:41:06] 2026-01-10 04:40:14,489 | INFO     | sum of square deviations: 1808330058.911115
[2026-01-09 23:41:06] 2026-01-10 04:40:14,490 | INFO     | sum of deviations: -11092793299.133326
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | mean x: 1768014157.5222223
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | mean y: 2569167.033333333
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | intersect: 10848053652.948944
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | chi2: 0.02058090433551429
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | current memory leak: -6.13 B/s (using 180 data points, chi2=0.02)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,491 | INFO     | could have reported an average CPU frequency of 3176 MHz (10 samples)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | ..............................
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . Timing measurements:
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . get job = 0 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . initial setup = 2 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . payload setup = 11 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . stage-in = 0 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . payload execution = 12520 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . stage-out = 4 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | . log creation = 0 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,492 | INFO     | ..............................
[2026-01-09 23:41:06] 2026-01-10 04:40:14,766 | INFO     | 
[2026-01-09 23:41:06] 2026-01-10 04:40:14,766 | INFO     | job summary report
[2026-01-09 23:41:06] 2026-01-10 04:40:14,766 | INFO     | --------------------------------------------------
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | PanDA job id: 6964539200
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | task id: 47898826
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | errors: (none)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | pilot state: finished 
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | transexitcode: 0
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | exeerrorcode: 0
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | exeerrordiag: 
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | exitcode: 0
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | exitmsg: OK
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | cpuconsumptiontime: 47078 s
[2026-01-09 23:41:06] 2026-01-10 04:40:14,767 | INFO     | nevents: 400
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | neventsw: 0
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | pid: 2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | pgrp: 2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | corecount: 8
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | event service: False
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | sizes: {0: 2283920, 1: 2283948, 8: 2284210, 11: 2284238, 12537: 2314270, 12543: 2323268, 12545: 2323452, 12557: 2323646}
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | --------------------------------------------------
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | 
[2026-01-09 23:41:06] 2026-01-10 04:40:14,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 23:41:06] 2026-01-10 04:40:14,810 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,810 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | job 6964539200 has completed (purged errors)
[2026-01-09 23:41:06] 2026-01-10 04:40:14,812 | INFO     | overall cleanup function is called
[2026-01-09 23:41:06] 2026-01-10 04:40:15,822 | INFO     | --- collectZombieJob: --- 10, [2777054]
[2026-01-09 23:41:06] 2026-01-10 04:40:15,822 | INFO     | zombie collector waiting for pid 2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:15,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:41:06] 2026-01-10 04:40:15,823 | INFO     | collected zombie processes
[2026-01-09 23:41:06] 2026-01-10 04:40:15,824 | INFO     | will attempt to kill all subprocesses of pid=2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:16,991 | INFO     | process IDs to be killed: [2777054] (in reverse order)
[2026-01-09 23:41:06] 2026-01-10 04:40:17,251 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:41:06] 2026-01-10 04:40:17,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:41:06] 2026-01-10 04:40:17,336 | INFO     | did not find any defunct processes belonging to 2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:17,383 | INFO     | did not find any defunct processes belonging to 2777054
[2026-01-09 23:41:06] 2026-01-10 04:40:17,383 | INFO     | ready for new job
[2026-01-09 23:41:06] 2026-01-10 04:40:17,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:41:06] 2026-01-10 04:40:17,389 | INFO     | ***************************************
[2026-01-09 23:41:06] 2026-01-10 04:40:17,389 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:41:06] 2026-01-10 04:40:17,389 | INFO     | ***************************************
[2026-01-09 23:41:06] 2026-01-10 04:40:17,389 | INFO     | 
[2026-01-09 23:41:06] 2026-01-10 04:40:17,408 | INFO     | architecture information:
[2026-01-09 23:41:06] 2026-01-10 04:40:17,424 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:41:06] 2026-01-10 04:40:17,516 | INFO     | cat /etc/os-release:
[2026-01-09 23:41:06] NAME="CentOS Linux"
[2026-01-09 23:41:06] VERSION="7 (Core)"
[2026-01-09 23:41:06] ID="centos"
[2026-01-09 23:41:06] ID_LIKE="rhel fedora"
[2026-01-09 23:41:06] VERSION_ID="7"
[2026-01-09 23:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:41:06] ANSI_COLOR="0;31"
[2026-01-09 23:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:41:06] HOME_URL="https://www.centos.org/"
[2026-01-09 23:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:41:06] 
[2026-01-09 23:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:41:06] 
[2026-01-09 23:41:06] 2026-01-10 04:40:17,517 | INFO     | ***************************************
[2026-01-09 23:41:06] 2026-01-10 04:40:18,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 23:41:06] 2026-01-10 04:40:18,176 | INFO     | sufficient remaining disk space (127012962304 B)
[2026-01-09 23:41:06] 2026-01-10 04:40:18,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:41:06] 2026-01-10 04:40:18,177 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:41:06] 2026-01-10 04:40:18,177 | INFO     | update_server=False
[2026-01-09 23:41:06] 2026-01-10 04:40:18,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:41:06] 2026-01-10 04:40:18,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:41:06] 2026-01-10 04:40:18,233 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 23:41:06] 2026-01-10 04:40:18,233 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 23:41:06] 2026-01-10 04:40:18,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:41:06] 2026-01-10 04:40:18,234 | INFO     | will abort loop
[2026-01-09 23:41:06] 2026-01-10 04:40:18,294 | INFO     | all job control threads have been joined
[2026-01-09 23:41:06] 2026-01-10 04:40:18,618 | INFO     | all payload control threads have been joined
[2026-01-09 23:41:06] 2026-01-10 04:40:18,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:41:06] 2026-01-10 04:40:19,122 | INFO     | all data control threads have been joined
[2026-01-09 23:41:06] 2026-01-10 04:40:19,183 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,212 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,216 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,238 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,300 | INFO     | [job] control thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:41:06] 2026-01-10 04:40:19,624 | INFO     | [payload] control thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:19,725 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,126 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,158 | INFO     | [data] control thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,352 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,370 | INFO     | [job] validate thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,453 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,630 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,688 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:20,826 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:22,187 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:41:06] 2026-01-10 04:40:36,341 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-01-09 23:41:06] 2026-01-10 04:40:48,837 | INFO     | PID=2770387 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:41:06] 2026-01-10 04:40:48,837 | INFO     | .. there are 16 such processes running
[2026-01-09 23:41:06] 2026-01-10 04:40:48,838 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:41:06] 2026-01-10 04:40:48,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:41:06] 2026-01-10 04:40:48,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:41:06] 2026-01-10 04:40:59,419 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:41:06] 2026-01-10 04:40:59,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703963285312)>', '<ExcThread(monitor, started 139703332366080)>']
[2026-01-09 23:41:06] 2026-01-10 04:41:00,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:41:06] 2026-01-10 04:41:00,906 | INFO     | [monitor] control thread has ended
[2026-01-09 23:41:06] 2026-01-10 04:41:04,979 | INFO     | all workflow threads have been joined
[2026-01-09 23:41:06] 2026-01-10 04:41:04,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:41:06] 2026-01-10 04:41:04,980 | INFO     | traces error code: 0
[2026-01-09 23:41:06] 2026-01-10 04:41:04,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:41:06] 2026-01-10 04:41:05,463 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:41:06] 2026-01-10 04:41:05,546 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:41:06] 2026-01-10 04:41:05,589 [wrapper] pilotpid: 2770387
[2026-01-09 23:41:06] 2026-01-10 04:41:05,631 [wrapper] Pilot exit status: 0
[2026-01-09 23:41:06] 2026-01-10 04:41:05,773 [wrapper] pandaids: 6964539200
[2026-01-09 23:41:06] 2026-01-10 04:41:06,494 [wrapper] cleanup supervisor_pilot 3290460 2770388
[2026-01-09 23:41:06] 2026-01-10 04:41:06,509 [wrapper] Test setup, not cleaning
[2026-01-09 23:41:06] 2026-01-10 04:41:06,537 [wrapper] apfmon messages muted
[2026-01-09 23:41:06] 2026-01-10 04:41:06,542 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:41:06] 2026-01-10 04:41:06,558 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:41:06]  *** Error codes and diagnostics ***
[2026-01-09 23:41:06]     "exeErrorCode": 0,
[2026-01-09 23:41:06]     "exeErrorDiag": "",
[2026-01-09 23:41:06]     "pilotErrorCode": 0,
[2026-01-09 23:41:06]     "pilotErrorDiag": "",
[2026-01-09 23:41:06]  *** Listing of results directory ***
[2026-01-09 23:41:06] total 441624
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 23:41:06] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:41:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:10 run_atlas
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:10 job.xml
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas 222884206 Jan  9 20:10 EVNT.47898824._001301.pool.root.1
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:10 start_atlas.sh
[2026-01-09 23:41:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:10 shared
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 20:10 input.tar.gz
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:10 boinc_lockfile
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 20:10 pandaJob.out
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas        57 Jan  9 20:10 setup.sh.local
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas    989374 Jan  9 20:10 agis_schedconf.cvmfs.json
[2026-01-09 23:41:06] drwx------. 5 boincer umatlas      4096 Jan  9 20:10 pilot3
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 23:37 init_data.xml
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas 221248344 Jan  9 23:38 HITS.47898826._040084.pool.root.1
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas       530 Jan  9 23:38 boinc_task_state.xml
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas      1044 Jan  9 23:39 memory_monitor_summary.json
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas    421106 Jan  9 23:39 log.47898826._040084.job.log.tgz.1
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas      7798 Jan  9 23:40 heartbeat.json
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas        95 Jan  9 23:40 pilot_heartbeat.json
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:41 boinc_mmap_file
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas      5011 Jan  9 23:41 pilotlog.txt
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:41 wrapper_checkpoint.txt
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas   1666862 Jan  9 23:41 log.47898826._040084.job.log.1
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas       357 Jan  9 23:41 output.list
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:41 runtime_log
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas   2109440 Jan  9 23:41 result.tar.gz
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 23:41 runtime_log.err
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas       659 Jan  9 23:41 biJLDmP1Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEemKDmg6UvGm.diag
[2026-01-09 23:41:06] -rw-r--r--. 1 boincer umatlas     21391 Jan  9 23:41 stderr.txt
[2026-01-09 23:41:06] HITS file was successfully produced:
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas 221248344 Jan  9 23:38 shared/HITS.pool.root.1
[2026-01-09 23:41:06]  *** Contents of shared directory: ***
[2026-01-09 23:41:06] total 436388
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas 222884206 Jan  9 20:10 ATLAS.root_0
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:10 start_atlas.sh
[2026-01-09 23:41:06] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 20:10 input.tar.gz
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas 221248344 Jan  9 23:38 HITS.pool.root.1
[2026-01-09 23:41:06] -rw-------. 1 boincer umatlas   2109440 Jan  9 23:41 result.tar.gz
23:41:08 (2764234): run_atlas exited; CPU time 47415.144854
23:41:08 (2764234): called boinc_finish(0)

</stderr_txt>
]]>

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