Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:18 (1233192): wrapper (7.7.26015): starting
21:27:18 (1233192): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 21:27:18] Arguments: --nthreads 9
[2026-01-09 21:27:18] Threads: 9
[2026-01-09 21:27:18] Checking for CVMFS
[2026-01-09 21:27:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:27:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:27:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:27:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:27:20] 2.13.3.0 11334 94249 163308 154964 2 378 22066263 32935937 11284 16776704 0 321428198 99.475 474367753 40396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:27:20] CVMFS is ok
[2026-01-09 21:27:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:27:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:27:20] Further information can be found at the LHC@home message board.
[2026-01-09 21:27:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:27:20] Checking for apptainer binary...
[2026-01-09 21:27:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:27:20] Running /usr/bin/apptainer --version
[2026-01-09 21:27:20] apptainer version 1.4.5-2.el9
[2026-01-09 21:27:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:27:20] c6-4-5-2.aglt2.org
[2026-01-09 21:27:20] apptainer works
[2026-01-09 21:27:20] Set ATHENA_PROC_NUMBER=9
[2026-01-09 21:27:20] Set ATHENA_CORE_NUMBER=9
[2026-01-09 21:27:20] Starting ATLAS job with PandaID=6964539115
[2026-01-09 21:27:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:28:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:28:36] 2026-01-10 06:27:12,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:28:36] 2026-01-10 06:27:13,011 | INFO     | time since job start (14369s) is within the limit (349056.0s)
[2026-01-10 01:28:36] 2026-01-10 06:27:15,018 | INFO     | time since job start (14371s) is within the limit (349056.0s)
[2026-01-10 01:28:36] 2026-01-10 06:27:15,225 | INFO     | monitor loop #875: job 0:6964539115 is in state 'finished'
[2026-01-10 01:28:36] 2026-01-10 06:27:15,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:28:36] 2026-01-10 06:27:17,025 | INFO     | time since job start (14373s) is within the limit (349056.0s)
[2026-01-10 01:28:36] 2026-01-10 06:27:17,746 | INFO     | monitor loop #876: job 0:6964539115 is in state 'finished'
[2026-01-10 01:28:36] 2026-01-10 06:27:17,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:28:36] 2026-01-10 06:27:17,928 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 01:28:36] 2026-01-10 06:27:18,012 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3111.8475624999996
[2026-01-10 01:28:36] 2026-01-10 06:27:18,100 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6964539115/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,101 | INFO     | extracted standard info from prmon json
[2026-01-10 01:28:36] 2026-01-10 06:27:18,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:28:36] 2026-01-10 06:27:18,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:28:36] 2026-01-10 06:27:18,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:28:36] 2026-01-10 06:27:18,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:28:36] 2026-01-10 06:27:18,145 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:28:36] 2026-01-10 06:27:18,145 | INFO     | sum of square deviations: 4024170476.5957465
[2026-01-10 01:28:36] 2026-01-10 06:27:18,181 | INFO     | sum of deviations: 31412458260.382965
[2026-01-10 01:28:36] 2026-01-10 06:27:18,181 | INFO     | mean x: 1768019224.5957446
[2026-01-10 01:28:36] 2026-01-10 06:27:18,182 | INFO     | mean y: 2541700.182978723
[2026-01-10 01:28:36] 2026-01-10 06:27:18,182 | INFO     | intersect: -13798521256.561039
[2026-01-10 01:28:36] 2026-01-10 06:27:18,182 | INFO     | chi2: 3.0911661249909637
[2026-01-10 01:28:36] 2026-01-10 06:27:18,182 | INFO     | sum of square deviations: 3772775902.2826085
[2026-01-10 01:28:36] 2026-01-10 06:27:18,211 | INFO     | sum of deviations: 45820186789.08695
[2026-01-10 01:28:36] 2026-01-10 06:27:18,211 | INFO     | mean x: 1768019072.1086957
[2026-01-10 01:28:36] 2026-01-10 06:27:18,211 | INFO     | mean y: 2550281.156521739
[2026-01-10 01:28:36] 2026-01-10 06:27:18,211 | INFO     | intersect: -21469958616.516224
[2026-01-10 01:28:36] 2026-01-10 06:27:18,212 | INFO     | chi2: 2.406121680630815
[2026-01-10 01:28:36] 2026-01-10 06:27:18,212 | INFO     | current chi2=2.406121680630815 (change=22.16135971541003 %)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,212 | INFO     | right removable region: 229
[2026-01-10 01:28:36] 2026-01-10 06:27:18,212 | INFO     | sum of square deviations: 3772690502.2826085
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | sum of deviations: -18765994707.304348
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | mean x: 1768019377.1086957
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | mean y: 2571949.052173913
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | intersect: 8796996578.678984
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | chi2: 1.093530993948688
[2026-01-10 01:28:36] 2026-01-10 06:27:18,214 | INFO     | current chi2=1.093530993948688 (change=64.62399787873308 %)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,219 | INFO     | sum of square deviations: 3531922433.1289
[2026-01-10 01:28:36] 2026-01-10 06:27:18,220 | INFO     | sum of deviations: -33703944811.039986
[2026-01-10 01:28:36] 2026-01-10 06:27:18,220 | INFO     | mean x: 1768019529.6177778
[2026-01-10 01:28:36] 2026-01-10 06:27:18,220 | INFO     | mean y: 2581390.36
[2026-01-10 01:28:36] 2026-01-10 06:27:18,220 | INFO     | intersect: 16874195583.282372
[2026-01-10 01:28:36] 2026-01-10 06:27:18,221 | INFO     | chi2: 0.9246501822844164
[2026-01-10 01:28:36] 2026-01-10 06:27:18,221 | INFO     | current chi2=0.9246501822844164 (change=15.443623692315386 %)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,221 | INFO     | left removable region: 20
[2026-01-10 01:28:36] 2026-01-10 06:27:18,221 | INFO     | sum of square deviations: 2830809409.3779993
[2026-01-10 01:28:36] 2026-01-10 06:27:18,222 | INFO     | sum of deviations: -25934975226.172253
[2026-01-10 01:28:36] 2026-01-10 06:27:18,227 | INFO     | mean x: 1768019651.617225
[2026-01-10 01:28:36] 2026-01-10 06:27:18,227 | INFO     | mean y: 2596584.04784689
[2026-01-10 01:28:36] 2026-01-10 06:27:18,227 | INFO     | intersect: 16200630161.360851
[2026-01-10 01:28:36] 2026-01-10 06:27:18,227 | INFO     | chi2: 0.15101229290274024
[2026-01-10 01:28:36] 2026-01-10 06:27:18,227 | INFO     | current memory leak: -9.16 B/s (using 209 data points, chi2=0.15)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,228 | INFO     | could have reported an average CPU frequency of 3116 MHz (11 samples)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | ..............................
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . Timing measurements:
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . get job = 0 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . initial setup = 2 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . payload setup = 4 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . stage-in = 0 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . payload execution = 14318 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . stage-out = 4 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | . log creation = 0 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,229 | INFO     | ..............................
[2026-01-10 01:28:36] 2026-01-10 06:27:18,494 | INFO     | 
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | job summary report
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | --------------------------------------------------
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | PanDA job id: 6964539115
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | task id: 47898826
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | errors: (none)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | pilot state: finished 
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | transexitcode: 0
[2026-01-10 01:28:36] 2026-01-10 06:27:18,495 | INFO     | exeerrorcode: 0
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | exeerrordiag: 
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | exitcode: 0
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | exitmsg: OK
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | cpuconsumptiontime: 52908 s
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | nevents: 400
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | neventsw: 0
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | pid: 1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | pgrp: 1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | corecount: 9
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | event service: False
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | sizes: {0: 2283747, 1: 2283946, 5: 2284208, 11: 2284264, 14327: 2314933, 14328: 2314932, 14332: 2324114, 14333: 2324170, 14360: 2324364}
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | --------------------------------------------------
[2026-01-10 01:28:36] 2026-01-10 06:27:18,496 | INFO     | 
[2026-01-10 01:28:36] 2026-01-10 06:27:18,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:28:36] 2026-01-10 06:27:18,751 | INFO     | job 6964539115 has completed (purged errors)
[2026-01-10 01:28:36] 2026-01-10 06:27:18,752 | INFO     | overall cleanup function is called
[2026-01-10 01:28:36] 2026-01-10 06:27:19,791 | INFO     | --- collectZombieJob: --- 10, [1244997]
[2026-01-10 01:28:36] 2026-01-10 06:27:19,791 | INFO     | zombie collector waiting for pid 1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:19,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:28:36] 2026-01-10 06:27:19,791 | INFO     | collected zombie processes
[2026-01-10 01:28:36] 2026-01-10 06:27:19,791 | INFO     | will attempt to kill all subprocesses of pid=1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:21,637 | INFO     | process IDs to be killed: [1244997] (in reverse order)
[2026-01-10 01:28:36] 2026-01-10 06:27:21,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:28:36] 2026-01-10 06:27:21,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:28:36] 2026-01-10 06:27:21,896 | INFO     | did not find any defunct processes belonging to 1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:21,914 | INFO     | did not find any defunct processes belonging to 1244997
[2026-01-10 01:28:36] 2026-01-10 06:27:21,915 | INFO     | ready for new job
[2026-01-10 01:28:36] 2026-01-10 06:27:21,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:28:36] 2026-01-10 06:27:21,917 | INFO     | ***************************************
[2026-01-10 01:28:36] 2026-01-10 06:27:21,918 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:28:36] 2026-01-10 06:27:21,918 | INFO     | ***************************************
[2026-01-10 01:28:36] 2026-01-10 06:27:21,918 | INFO     | 
[2026-01-10 01:28:36] 2026-01-10 06:27:21,954 | INFO     | architecture information:
[2026-01-10 01:28:36] 2026-01-10 06:27:21,978 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:28:36] 2026-01-10 06:27:22,128 | INFO     | cat /etc/os-release:
[2026-01-10 01:28:36] NAME="CentOS Linux"
[2026-01-10 01:28:36] VERSION="7 (Core)"
[2026-01-10 01:28:36] ID="centos"
[2026-01-10 01:28:36] ID_LIKE="rhel fedora"
[2026-01-10 01:28:36] VERSION_ID="7"
[2026-01-10 01:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:28:36] ANSI_COLOR="0;31"
[2026-01-10 01:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:28:36] HOME_URL="https://www.centos.org/"
[2026-01-10 01:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:28:36] 
[2026-01-10 01:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:28:36] 
[2026-01-10 01:28:36] 2026-01-10 06:27:22,128 | INFO     | ***************************************
[2026-01-10 01:28:36] 2026-01-10 06:27:22,632 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 01:28:36] 2026-01-10 06:27:22,818 | INFO     | sufficient remaining disk space (75330748416 B)
[2026-01-10 01:28:36] 2026-01-10 06:27:22,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:28:36] 2026-01-10 06:27:22,818 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:28:36] 2026-01-10 06:27:22,818 | INFO     | update_server=False
[2026-01-10 01:28:36] 2026-01-10 06:27:22,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:28:36] 2026-01-10 06:27:22,826 | INFO     | all data control threads have been joined
[2026-01-10 01:28:36] 2026-01-10 06:27:23,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:28:36] 2026-01-10 06:27:23,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:28:36] 2026-01-10 06:27:23,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:28:36] 2026-01-10 06:27:23,778 | INFO     | aborting loop
[2026-01-10 01:28:36] 2026-01-10 06:27:23,825 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:23,833 | INFO     | [data] control thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:23,834 | INFO     | [job] validate thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:23,938 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:23,993 | INFO     | all job control threads have been joined
[2026-01-10 01:28:36] 2026-01-10 06:27:23,994 | INFO     | all payload control threads have been joined
[2026-01-10 01:28:36] 2026-01-10 06:27:24,175 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:24,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:28:36] 2026-01-10 06:27:24,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:24,692 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:24,784 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:24,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,000 | INFO     | [job] control thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,010 | INFO     | [payload] control thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,084 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,157 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,190 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:25,734 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:28,321 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:28:36] 2026-01-10 06:27:41,960 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-01-10 01:28:36] 2026-01-10 06:27:52,931 | INFO     | PID=1238124 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 01:28:36] 2026-01-10 06:27:52,931 | INFO     | .. there are 11 such processes running
[2026-01-10 01:28:36] 2026-01-10 06:27:52,932 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:28:36] 2026-01-10 06:27:52,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:28:36] 2026-01-10 06:27:52,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:28:36] 2026-01-10 06:28:09,103 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:28:36] 2026-01-10 06:28:09,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170548893504)>', '<ExcThread(monitor, started 140169680254720)>']
[2026-01-10 01:28:36] 2026-01-10 06:28:10,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:28:36] 2026-01-10 06:28:10,050 | INFO     | [monitor] control thread has ended
[2026-01-10 01:28:36] 2026-01-10 06:28:14,593 | INFO     | all workflow threads have been joined
[2026-01-10 01:28:36] 2026-01-10 06:28:14,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:28:36] 2026-01-10 06:28:14,593 | INFO     | traces error code: 0
[2026-01-10 01:28:36] 2026-01-10 06:28:14,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:28:36] 2026-01-10 06:28:15,980 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:28:36] 2026-01-10 06:28:16,011 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:28:36] 2026-01-10 06:28:16,053 [wrapper] pilotpid: 1238124
[2026-01-10 01:28:36] 2026-01-10 06:28:16,055 [wrapper] Pilot exit status: 0
[2026-01-10 01:28:36] 2026-01-10 06:28:16,145 [wrapper] pandaids: 6964539115
[2026-01-10 01:28:36] 2026-01-10 06:28:16,351 [wrapper] cleanup supervisor_pilot 1800629 1238125
[2026-01-10 01:28:36] 2026-01-10 06:28:16,354 [wrapper] Test setup, not cleaning
[2026-01-10 01:28:36] 2026-01-10 06:28:16,356 [wrapper] apfmon messages muted
[2026-01-10 01:28:36] 2026-01-10 06:28:16,359 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:28:36] 2026-01-10 06:28:16,362 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:28:36]  *** Error codes and diagnostics ***
[2026-01-10 01:28:36]     "exeErrorCode": 0,
[2026-01-10 01:28:36]     "exeErrorDiag": "",
[2026-01-10 01:28:36]     "pilotErrorCode": 0,
[2026-01-10 01:28:36]     "pilotErrorDiag": "",
[2026-01-10 01:28:36]  *** Listing of results directory ***
[2026-01-10 01:28:36] total 446516
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-10 01:28:36] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:28:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:27 run_atlas
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:27 job.xml
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas 226368033 Jan  9 21:27 EVNT.47898824._001059.pool.root.1
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:27 start_atlas.sh
[2026-01-10 01:28:36] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:27 shared
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 21:27 input.tar.gz
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:27 boinc_lockfile
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 21:27 pandaJob.out
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas        57 Jan  9 21:27 setup.sh.local
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas    989382 Jan  9 21:27 agis_schedconf.cvmfs.json
[2026-01-10 01:28:36] drwx------. 5 boincer umatlas      4096 Jan  9 21:27 pilot3
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas 222373373 Jan 10 01:25 HITS.47898826._039999.pool.root.1
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas       531 Jan 10 01:25 boinc_task_state.xml
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas      1036 Jan 10 01:26 memory_monitor_summary.json
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas   1516240 Jan 10 01:26 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas    471089 Jan 10 01:26 log.47898826._039999.job.log.tgz.1
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas      6875 Jan 10 01:27 init_data.xml
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas      7812 Jan 10 01:27 heartbeat.json
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas        95 Jan 10 01:27 pilot_heartbeat.json
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas      4824 Jan 10 01:28 pilotlog.txt
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas   1815218 Jan 10 01:28 log.47898826._039999.job.log.1
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas       357 Jan 10 01:28 output.list
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas       620 Jan 10 01:28 runtime_log
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas   2304000 Jan 10 01:28 result.tar.gz
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas       656 Jan 10 01:28 SvMKDmQ1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCThKDmoNuEOm.diag
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 01:28 runtime_log.err
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 01:28 boinc_mmap_file
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas     21405 Jan 10 01:28 stderr.txt
[2026-01-10 01:28:36] -rw-r--r--. 1 boincer umatlas        28 Jan 10 01:28 wrapper_checkpoint.txt
[2026-01-10 01:28:36] HITS file was successfully produced:
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas 222373373 Jan 10 01:25 shared/HITS.pool.root.1
[2026-01-10 01:28:36]  *** Contents of shared directory: ***
[2026-01-10 01:28:36] total 441080
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas 226368033 Jan  9 21:27 ATLAS.root_0
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:27 start_atlas.sh
[2026-01-10 01:28:36] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 21:27 input.tar.gz
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas 222373373 Jan 10 01:25 HITS.pool.root.1
[2026-01-10 01:28:36] -rw-------. 1 boincer umatlas   2304000 Jan 10 01:28 result.tar.gz
01:28:38 (1233192): run_atlas exited; CPU time 53282.778054
01:28:38 (1233192): called boinc_finish(0)

</stderr_txt>
]]>

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