Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:39 (1318945): wrapper (7.7.26015): starting
20:22:39 (1318945): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 20:22:39] Arguments: --nthreads 11
[2026-01-09 20:22:39] Threads: 11
[2026-01-09 20:22:39] Checking for CVMFS
[2026-01-09 20:22:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:22:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:22:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:22:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:22:40] 2.13.3.0 17216 94049 383552 154963 2 179 28587444 32935937 33516 16776704 0 1345030667 99.635 1308311412 50004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:22:40] CVMFS is ok
[2026-01-09 20:22:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:22:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:22:40] Further information can be found at the LHC@home message board.
[2026-01-09 20:22:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:22:40] Checking for apptainer binary...
[2026-01-09 20:22:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:22:40] Running /usr/bin/apptainer --version
[2026-01-09 20:22:40] apptainer version 1.4.5-2.el9
[2026-01-09 20:22:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:22:40] c7-9-14.aglt2.org
[2026-01-09 20:22:40] apptainer works
[2026-01-09 20:22:40] Set ATHENA_PROC_NUMBER=11
[2026-01-09 20:22:40] Set ATHENA_CORE_NUMBER=11
[2026-01-09 20:22:40] Starting ATLAS job with PandaID=6962318637
[2026-01-09 20:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:22:09]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:22:09]  workdir=None
[2026-01-09 21:22:09] ]
[2026-01-09 21:22:09] 2026-01-10 02:20:55,862 | INFO     | transferring file log.47898826._012966.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6962318637/log.47898826._012966.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 21:22:09] 2026-01-10 02:20:55,862 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6962318637/log.47898826._012966.job.log.tgz.1 /tmp/boinchome/slots/2/log.47898826._012966.job
[2026-01-09 21:22:09] 2026-01-10 02:20:55,879 | INFO     | adding to output.list: log.47898826._012966.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/68/log.47898826._012966.job.log.tg
[2026-01-09 21:22:09] 2026-01-10 02:20:55,880 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:22:09] 2026-01-10 02:20:55,880 | INFO     | summary of transferred files:
[2026-01-09 21:22:09] 2026-01-10 02:20:55,880 | INFO     |  -- lfn=log.47898826._012966.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:22:09] 2026-01-10 02:20:55,880 | INFO     | stage-out finished correctly
[2026-01-09 21:22:09] 2026-01-10 02:20:56,809 | INFO     | time since job start (3479s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:20:57,360 | INFO     | monitor loop #251: job 0:6962318637 is in state 'finished'
[2026-01-09 21:22:09] 2026-01-10 02:20:57,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:22:09] 2026-01-10 02:20:58,305 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:22:09] 2026-01-10 02:20:58,816 | INFO     | time since job start (3481s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:20:59,785 | INFO     | job 6962318637 has state=finished
[2026-01-09 21:22:09] 2026-01-10 02:20:59,785 | INFO     | preparing for final server update for job 6962318637 in state='finished'
[2026-01-09 21:22:09] 2026-01-10 02:20:59,786 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:22:09] 2026-01-10 02:20:59,786 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:22:09] 2026-01-10 02:20:59,786 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:22:09] 2026-01-10 02:20:59,786 | INFO     | job 6962318637 has finished - writing final server update
[2026-01-09 21:22:09] 2026-01-10 02:20:59,786 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:22:09] 2026-01-10 02:20:59,789 | INFO     | executing command: lscpu
[2026-01-09 21:22:09] 2026-01-10 02:20:59,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:22:09] 2026-01-10 02:20:59,869 | INFO     | monitor loop #252: job 0:6962318637 is in state 'finished'
[2026-01-09 21:22:09] 2026-01-10 02:20:59,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:22:09] 2026-01-10 02:21:00,824 | INFO     | time since job start (3483s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:21:02,375 | INFO     | monitor loop #253: job 0:6962318637 is in state 'finished'
[2026-01-09 21:22:09] 2026-01-10 02:21:02,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:22:09] 2026-01-10 02:21:02,387 | INFO     | PID=1322816 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:22:09] 2026-01-10 02:21:02,387 | INFO     | .. there are 34 such processes running
[2026-01-09 21:22:09] 2026-01-10 02:21:03,387 | INFO     | time since job start (3486s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:21:04,881 | INFO     | monitor loop #254: job 0:6962318637 is in state 'finished'
[2026-01-09 21:22:09] 2026-01-10 02:21:04,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:22:09] 2026-01-10 02:21:05,394 | INFO     | time since job start (3488s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:21:07,387 | INFO     | monitor loop #255: job 0:6962318637 is in state 'finished'
[2026-01-09 21:22:09] 2026-01-10 02:21:07,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:22:09] 2026-01-10 02:21:07,400 | INFO     | time since job start (3490s) is within the limit (174528.0s)
[2026-01-09 21:22:09] 2026-01-10 02:21:08,854 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:22:09] 2026-01-10 02:21:08,859 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3794.6948124999994
[2026-01-09 21:22:09] 2026-01-10 02:21:08,872 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962318637/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:22:09] 2026-01-10 02:21:08,872 | INFO     | extracted standard info from prmon json
[2026-01-09 21:22:09] 2026-01-10 02:21:08,873 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:22:09] 2026-01-10 02:21:08,873 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:22:09] 2026-01-10 02:21:08,873 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:22:09] 2026-01-10 02:21:08,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | sum of square deviations: 38744912.5
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | sum of deviations: -3869137950.999999
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | mean x: 1768010015.5
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | mean y: 2970948.68
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | intersect: 176559690459.1227
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | chi2: 0.032935627811762305
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | current memory leak: -99.86 B/s (using 50 data points, chi2=0.03)
[2026-01-09 21:22:09] 2026-01-10 02:21:08,874 | INFO     | could have reported an average CPU frequency of 3797 MHz (5 samples)
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | ..............................
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . Timing measurements:
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . get job = 0 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . initial setup = 2 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . payload setup = 11 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . stage-in = 0 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . payload execution = 3442 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . stage-out = 0 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | . log creation = 0 s
[2026-01-09 21:22:09] 2026-01-10 02:21:08,875 | INFO     | ..............................
[2026-01-09 21:22:09] 2026-01-10 02:21:09,073 | INFO     | 
[2026-01-09 21:22:09] 2026-01-10 02:21:09,073 | INFO     | job summary report
[2026-01-09 21:22:09] 2026-01-10 02:21:09,073 | INFO     | --------------------------------------------------
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | PanDA job id: 6962318637
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | task id: 47898826
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | errors: (none)
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | pilot state: finished 
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | transexitcode: 0
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | exeerrorcode: 0
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | exeerrordiag: 
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | exitcode: 0
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | exitmsg: OK
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | cpuconsumptiontime: 31428 s
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | nevents: 400
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | neventsw: 0
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | pid: 1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | pgrp: 1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | corecount: 11
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | event service: False
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | sizes: {0: 2283963, 10: 2284225, 11: 2284253, 3457: 2309888, 3458: 2318886, 3460: 2318942, 3471: 2319296}
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | --------------------------------------------------
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | 
[2026-01-09 21:22:09] 2026-01-10 02:21:09,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | job 6962318637 has completed (purged errors)
[2026-01-09 21:22:09] 2026-01-10 02:21:09,187 | INFO     | overall cleanup function is called
[2026-01-09 21:22:09] 2026-01-10 02:21:10,209 | INFO     | --- collectZombieJob: --- 10, [1330639]
[2026-01-09 21:22:09] 2026-01-10 02:21:10,209 | INFO     | zombie collector waiting for pid 1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:10,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:22:09] 2026-01-10 02:21:10,210 | INFO     | collected zombie processes
[2026-01-09 21:22:09] 2026-01-10 02:21:10,210 | INFO     | will attempt to kill all subprocesses of pid=1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:10,564 | INFO     | process IDs to be killed: [1330639] (in reverse order)
[2026-01-09 21:22:09] 2026-01-10 02:21:10,706 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:22:09] 2026-01-10 02:21:10,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:22:09] 2026-01-10 02:21:10,726 | INFO     | did not find any defunct processes belonging to 1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:10,756 | INFO     | did not find any defunct processes belonging to 1330639
[2026-01-09 21:22:09] 2026-01-10 02:21:10,756 | INFO     | ready for new job
[2026-01-09 21:22:09] 2026-01-10 02:21:10,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:22:09] 2026-01-10 02:21:10,757 | INFO     | ***************************************
[2026-01-09 21:22:09] 2026-01-10 02:21:10,758 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:22:09] 2026-01-10 02:21:10,758 | INFO     | ***************************************
[2026-01-09 21:22:09] 2026-01-10 02:21:10,758 | INFO     | 
[2026-01-09 21:22:09] 2026-01-10 02:21:10,762 | INFO     | architecture information:
[2026-01-09 21:22:09] 2026-01-10 02:21:10,762 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:22:09] 2026-01-10 02:21:10,785 | INFO     | cat /etc/os-release:
[2026-01-09 21:22:09] NAME="CentOS Linux"
[2026-01-09 21:22:09] VERSION="7 (Core)"
[2026-01-09 21:22:09] ID="centos"
[2026-01-09 21:22:09] ID_LIKE="rhel fedora"
[2026-01-09 21:22:09] VERSION_ID="7"
[2026-01-09 21:22:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:22:09] ANSI_COLOR="0;31"
[2026-01-09 21:22:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:22:09] HOME_URL="https://www.centos.org/"
[2026-01-09 21:22:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:22:09] 
[2026-01-09 21:22:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:22:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:22:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:22:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:22:09] 
[2026-01-09 21:22:09] 2026-01-10 02:21:10,785 | INFO     | ***************************************
[2026-01-09 21:22:09] 2026-01-10 02:21:11,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 21:22:09] 2026-01-10 02:21:11,324 | INFO     | sufficient remaining disk space (73210527744 B)
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | INFO     | update_server=False
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:22:09] 2026-01-10 02:21:11,325 | INFO     | aborting loop
[2026-01-09 21:22:09] 2026-01-10 02:21:11,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:22:09] 2026-01-10 02:21:11,865 | INFO     | all data control threads have been joined
[2026-01-09 21:22:09] 2026-01-10 02:21:11,865 | INFO     | all payload control threads have been joined
[2026-01-09 21:22:09] 2026-01-10 02:21:12,058 | INFO     | all job control threads have been joined
[2026-01-09 21:22:09] 2026-01-10 02:21:12,330 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:12,331 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:12,804 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:12,871 | INFO     | [data] control thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:12,871 | INFO     | [payload] control thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,000 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,066 | INFO     | [job] control thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,263 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,331 | INFO     | [job] validate thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:22:09] 2026-01-10 02:21:13,494 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,535 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,817 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,854 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:13,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:22:09] 2026-01-10 02:21:14,954 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:17,435 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:22,216 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:22:09] 2026-01-10 02:21:23,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:22:09] 2026-01-10 02:21:41,039 | INFO     | PID=1322816 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:22:09] 2026-01-10 02:21:41,039 | INFO     | .. there are 34 such processes running
[2026-01-09 21:22:09] 2026-01-10 02:21:41,039 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:22:09] 2026-01-10 02:21:41,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:22:09] 2026-01-10 02:21:41,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:22:09] 2026-01-10 02:22:03,271 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:22:09] 2026-01-10 02:22:03,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028632807232)>', '<ExcThread(monitor, started 140028147660544)>']
[2026-01-09 21:22:09] 2026-01-10 02:22:04,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:22:09] 2026-01-10 02:22:04,183 | INFO     | [monitor] control thread has ended
[2026-01-09 21:22:09] 2026-01-10 02:22:08,810 | INFO     | all workflow threads have been joined
[2026-01-09 21:22:09] 2026-01-10 02:22:08,811 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:22:09] 2026-01-10 02:22:08,811 | INFO     | traces error code: 0
[2026-01-09 21:22:09] 2026-01-10 02:22:08,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:22:09] 2026-01-10 02:22:08,911 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:22:09] 2026-01-10 02:22:08,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:22:09] 2026-01-10 02:22:08,920 [wrapper] pilotpid: 1322816
[2026-01-09 21:22:09] 2026-01-10 02:22:08,922 [wrapper] Pilot exit status: 0
[2026-01-09 21:22:09] 2026-01-10 02:22:09,003 [wrapper] pandaids: 6962318637
[2026-01-09 21:22:09] 2026-01-10 02:22:09,122 [wrapper] cleanup supervisor_pilot 1851895 1322817
[2026-01-09 21:22:09] 2026-01-10 02:22:09,144 [wrapper] Test setup, not cleaning
[2026-01-09 21:22:09] 2026-01-10 02:22:09,147 [wrapper] apfmon messages muted
[2026-01-09 21:22:09] 2026-01-10 02:22:09,159 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:22:09] 2026-01-10 02:22:09,161 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:22:09]  *** Error codes and diagnostics ***
[2026-01-09 21:22:09]     "exeErrorCode": 0,
[2026-01-09 21:22:09]     "exeErrorDiag": "",
[2026-01-09 21:22:09]     "pilotErrorCode": 0,
[2026-01-09 21:22:09]     "pilotErrorDiag": "",
[2026-01-09 21:22:09]  *** Listing of results directory ***
[2026-01-09 21:22:09] total 441828
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-09 21:22:09] -rwx------. 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:22:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:22 run_atlas
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:22 job.xml
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas 226953148 Jan  9 20:22 EVNT.47898824._000557.pool.root.1
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:22 start_atlas.sh
[2026-01-09 21:22:09] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:22 shared
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 20:22 input.tar.gz
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:22 boinc_lockfile
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 20:22 pandaJob.out
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas        57 Jan  9 20:22 setup.sh.local
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas    989382 Jan  9 20:22 agis_schedconf.cvmfs.json
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:22:09] drwx------. 5 boincer umatlas      4096 Jan  9 20:22 pilot3
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas 219834388 Jan  9 21:20 HITS.47898826._012966.pool.root.1
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:20 boinc_task_state.xml
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas      7170 Jan  9 21:20 init_data.xml
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas      1032 Jan  9 21:20 memory_monitor_summary.json
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas    341328 Jan  9 21:20 log.47898826._012966.job.log.tgz.1
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas        95 Jan  9 21:20 pilot_heartbeat.json
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas      7768 Jan  9 21:21 heartbeat.json
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:22 boinc_mmap_file
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:22 wrapper_checkpoint.txt
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas      4896 Jan  9 21:22 pilotlog.txt
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas    524007 Jan  9 21:22 log.47898826._012966.job.log.1
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas       357 Jan  9 21:22 output.list
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:22 runtime_log
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas    880640 Jan  9 21:22 result.tar.gz
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas      9339 Jan  9 21:22 runtime_log.err
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas       651 Jan  9 21:22 6lTNDmwkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAbdKDm1q0qon.diag
[2026-01-09 21:22:09] -rw-r--r--. 1 boincer umatlas     22409 Jan  9 21:22 stderr.txt
[2026-01-09 21:22:09] HITS file was successfully produced:
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas 219834388 Jan  9 21:20 shared/HITS.pool.root.1
[2026-01-09 21:22:09]  *** Contents of shared directory: ***
[2026-01-09 21:22:09] total 437784
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas 226953148 Jan  9 20:22 ATLAS.root_0
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:22 start_atlas.sh
[2026-01-09 21:22:09] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 20:22 input.tar.gz
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas 219834388 Jan  9 21:20 HITS.pool.root.1
[2026-01-09 21:22:09] -rw-------. 1 boincer umatlas    880640 Jan  9 21:22 result.tar.gz
21:22:11 (1318945): run_atlas exited; CPU time 31499.420056
21:22:11 (1318945): called boinc_finish(0)

</stderr_txt>
]]>

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