Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:35:04 (2606705): wrapper (7.7.26015): starting
20:35:04 (2606705): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 20:35:04] Arguments: --nthreads 9
[2026-01-09 20:35:04] Threads: 9
[2026-01-09 20:35:04] Checking for CVMFS
[2026-01-09 20:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:35:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:35:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:35:04] 2.13.3.0 2295398 17667 77628 154963 4 81 22677814 37030912 1932 16776704 0 5697449 99.906 829746 47305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:35:04] CVMFS is ok
[2026-01-09 20:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:35:04] Further information can be found at the LHC@home message board.
[2026-01-09 20:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:35:04] Checking for apptainer binary...
[2026-01-09 20:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:35:04] Running /usr/bin/apptainer --version
[2026-01-09 20:35:04] apptainer version 1.4.5-2.el9
[2026-01-09 20:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:35:05] c-205-36.aglt2.org
[2026-01-09 20:35:05] apptainer works
[2026-01-09 20:35:05] Set ATHENA_PROC_NUMBER=9
[2026-01-09 20:35:05] Set ATHENA_CORE_NUMBER=9
[2026-01-09 20:35:05] Starting ATLAS job with PandaID=6963155794
[2026-01-09 20:35:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:21:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:21:33] 2026-01-10 03:20:58,601 | INFO     | job 6963155794 has finished - writing final server update
[2026-01-09 22:21:33] 2026-01-10 03:20:58,601 | INFO     | total number of processed events: 400 (read)
[2026-01-09 22:21:33] 2026-01-10 03:20:58,602 | INFO     | executing command: lscpu
[2026-01-09 22:21:33] 2026-01-10 03:20:58,623 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 22:21:33] 2026-01-10 03:21:00,147 | INFO     | time since job start (6345s) is within the limit (349056.0s)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,498 | INFO     | monitor loop #476: job 0:6963155794 is in state 'finished'
[2026-01-09 22:21:33] 2026-01-10 03:21:00,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,790 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:21:33] 2026-01-10 03:21:00,793 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2749.9763125000004
[2026-01-09 22:21:33] 2026-01-10 03:21:00,797 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963155794/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,797 | INFO     | extracted standard info from prmon json
[2026-01-09 22:21:33] 2026-01-10 03:21:00,797 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:21:33] 2026-01-10 03:21:00,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:21:33] 2026-01-10 03:21:00,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:21:33] 2026-01-10 03:21:00,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:21:33] 2026-01-10 03:21:00,799 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:21:33] 2026-01-10 03:21:00,799 | INFO     | sum of square deviations: 348769330.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | sum of deviations: -6771571204.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | mean x: 1768012080.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | mean y: 2695616.769230769
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | intersect: 34329738343.370018
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | chi2: 1.6252186391732524
[2026-01-09 22:21:33] 2026-01-10 03:21:00,800 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | sum of deviations: -5485506252.000001
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | mean x: 1768011928.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | mean y: 2699712.1414141413
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | intersect: 32240263226.296978
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | chi2: 1.6272078141850097
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | current chi2=1.6272078141850097 (change=-0.12239430214566202 %)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | right removable region: 98
[2026-01-09 22:21:33] 2026-01-10 03:21:00,801 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | sum of deviations: -22412398203.999996
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | mean x: 1768012233.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | mean y: 2744244.0303030303
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | intersect: 131717339407.38293
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | chi2: 0.1844225253334607
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | current chi2=0.1844225253334607 (change=88.6524482990623 %)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | sum of square deviations: 257521107.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | sum of deviations: -21580303426.0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,802 | INFO     | mean x: 1768012385.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | mean y: 2741091.425531915
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | intersect: 148162416662.93604
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | chi2: 0.15175873932927803
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | current chi2=0.15175873932927803 (change=17.71138636406923 %)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | left removable region: 20
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | sum of square deviations: 147126479.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | sum of deviations: -13084014775.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | mean x: 1768012507.5
[2026-01-09 22:21:33] 2026-01-10 03:21:00,803 | INFO     | mean y: 2719406.7564102565
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | intersect: 157232756107.24582
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | chi2: 0.1398991897887667
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | current memory leak: -88.93 B/s (using 78 data points, chi2=0.14)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | could have reported an average CPU frequency of 2667 MHz (7 samples)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | ..............................
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . Timing measurements:
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . get job = 0 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . initial setup = 2 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . payload setup = 5 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . stage-in = 0 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,804 | INFO     | . payload execution = 6318 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,805 | INFO     | . stage-out = 0 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,805 | INFO     | . log creation = 0 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,805 | INFO     | ..............................
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | 
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | job summary report
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | --------------------------------------------------
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | PanDA job id: 6963155794
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | task id: 47898826
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | errors: (none)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | pilot state: finished 
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | transexitcode: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | exeerrorcode: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | exeerrordiag: 
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | exitcode: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,860 | INFO     | exitmsg: OK
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | cpuconsumptiontime: 52913 s
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | nevents: 400
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | neventsw: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | pid: 2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | pgrp: 2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | corecount: 9
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | event service: False
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | sizes: {0: 2283743, 1: 2283998, 5: 2284260, 12: 2284316, 6327: 2311443, 6328: 2320625, 6331: 2320763}
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | --------------------------------------------------
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | 
[2026-01-09 22:21:33] 2026-01-10 03:21:00,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:21:33] 2026-01-10 03:21:00,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,872 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:21:33] 2026-01-10 03:21:00,874 | INFO     | job 6963155794 has completed (purged errors)
[2026-01-09 22:21:33] 2026-01-10 03:21:00,874 | INFO     | overall cleanup function is called
[2026-01-09 22:21:33] 2026-01-10 03:21:01,881 | INFO     | --- collectZombieJob: --- 10, [2616798]
[2026-01-09 22:21:33] 2026-01-10 03:21:01,881 | INFO     | zombie collector waiting for pid 2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:01,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:21:33] 2026-01-10 03:21:01,881 | INFO     | collected zombie processes
[2026-01-09 22:21:33] 2026-01-10 03:21:01,881 | INFO     | will attempt to kill all subprocesses of pid=2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:01,987 | INFO     | process IDs to be killed: [2616798] (in reverse order)
[2026-01-09 22:21:33] 2026-01-10 03:21:02,020 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:21:33] 2026-01-10 03:21:02,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:21:33] 2026-01-10 03:21:02,023 | INFO     | did not find any defunct processes belonging to 2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:02,025 | INFO     | did not find any defunct processes belonging to 2616798
[2026-01-09 22:21:33] 2026-01-10 03:21:02,026 | INFO     | ready for new job
[2026-01-09 22:21:33] 2026-01-10 03:21:02,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:21:33] 2026-01-10 03:21:02,027 | INFO     | ***************************************
[2026-01-09 22:21:33] 2026-01-10 03:21:02,027 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:21:33] 2026-01-10 03:21:02,027 | INFO     | ***************************************
[2026-01-09 22:21:33] 2026-01-10 03:21:02,027 | INFO     | 
[2026-01-09 22:21:33] 2026-01-10 03:21:02,028 | INFO     | architecture information:
[2026-01-09 22:21:33] 2026-01-10 03:21:02,029 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:21:33] 2026-01-10 03:21:02,037 | INFO     | cat /etc/os-release:
[2026-01-09 22:21:33] NAME="CentOS Linux"
[2026-01-09 22:21:33] VERSION="7 (Core)"
[2026-01-09 22:21:33] ID="centos"
[2026-01-09 22:21:33] ID_LIKE="rhel fedora"
[2026-01-09 22:21:33] VERSION_ID="7"
[2026-01-09 22:21:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:21:33] ANSI_COLOR="0;31"
[2026-01-09 22:21:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:21:33] HOME_URL="https://www.centos.org/"
[2026-01-09 22:21:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:21:33] 
[2026-01-09 22:21:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:21:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:21:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:21:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:21:33] 
[2026-01-09 22:21:33] 2026-01-10 03:21:02,037 | INFO     | ***************************************
[2026-01-09 22:21:33] 2026-01-10 03:21:02,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:21:33] 2026-01-10 03:21:02,548 | INFO     | sufficient remaining disk space (41739616256 B)
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | INFO     | update_server=False
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:21:33] 2026-01-10 03:21:02,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:21:33] 2026-01-10 03:21:02,576 | INFO     | all data control threads have been joined
[2026-01-09 22:21:33] 2026-01-10 03:21:03,001 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:21:33] 2026-01-10 03:21:03,001 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:21:33] 2026-01-10 03:21:03,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:21:33] 2026-01-10 03:21:03,001 | INFO     | will abort loop
[2026-01-09 22:21:33] 2026-01-10 03:21:03,554 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,554 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,581 | INFO     | [data] control thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,686 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,697 | INFO     | all job control threads have been joined
[2026-01-09 22:21:33] 2026-01-10 03:21:03,924 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,946 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:03,950 | INFO     | all payload control threads have been joined
[2026-01-09 22:21:33] 2026-01-10 03:21:04,007 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,129 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,459 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,554 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:21:33] 2026-01-10 03:21:04,702 | INFO     | [job] control thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,742 | INFO     | [job] validate thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,910 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,955 | INFO     | [payload] control thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:04,955 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:08,609 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:21:33] 2026-01-10 03:21:24,946 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:21:33] 2026-01-10 03:21:26,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123276621632)>', '<ExcThread(monitor, started 140122561439488)>']
[2026-01-09 22:21:33] 2026-01-10 03:21:31,909 | INFO     | all workflow threads have been joined
[2026-01-09 22:21:33] 2026-01-10 03:21:31,909 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:21:33] 2026-01-10 03:21:31,909 | INFO     | traces error code: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:31,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:21:33] 2026-01-10 03:21:33,382 | INFO     | PID=2610404 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | INFO     | .. there are 2 such processes running
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:21:33] 2026-01-10 03:21:33,383 | INFO     | [monitor] control thread has ended
[2026-01-09 22:21:33] 2026-01-10 03:21:33,456 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:21:33] 2026-01-10 03:21:33,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:21:33] 2026-01-10 03:21:33,460 [wrapper] pilotpid: 2610404
[2026-01-09 22:21:33] 2026-01-10 03:21:33,461 [wrapper] Pilot exit status: 0
[2026-01-09 22:21:33] 2026-01-10 03:21:33,467 [wrapper] pandaids: 6963155794
[2026-01-09 22:21:33] 2026-01-10 03:21:33,488 [wrapper] cleanup supervisor_pilot 2713655 2610405
[2026-01-09 22:21:33] 2026-01-10 03:21:33,490 [wrapper] Test setup, not cleaning
[2026-01-09 22:21:33] 2026-01-10 03:21:33,491 [wrapper] apfmon messages muted
[2026-01-09 22:21:33] 2026-01-10 03:21:33,493 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:21:33] 2026-01-10 03:21:33,494 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:21:33]  *** Error codes and diagnostics ***
[2026-01-09 22:21:33]     "exeErrorCode": 0,
[2026-01-09 22:21:33]     "exeErrorDiag": "",
[2026-01-09 22:21:33]     "pilotErrorCode": 0,
[2026-01-09 22:21:33]     "pilotErrorDiag": "",
[2026-01-09 22:21:33]  *** Listing of results directory ***
[2026-01-09 22:21:33] total 446524
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 22:21:33] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:21:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:35 run_atlas
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:35 job.xml
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas 224196862 Jan  9 20:35 EVNT.47898824._001201.pool.root.1
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:35 start_atlas.sh
[2026-01-09 22:21:33] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:35 shared
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 20:35 input.tar.gz
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:35 boinc_lockfile
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 20:35 pandaJob.out
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas    989382 Jan  9 20:35 agis_schedconf.cvmfs.json
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:21:33] drwx------. 5 boincer umatlas      4096 Jan  9 20:35 pilot3
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas      6529 Jan  9 22:11 init_data.xml
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas 226531432 Jan  9 22:20 HITS.47898826._031016.pool.root.1
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas       529 Jan  9 22:20 boinc_task_state.xml
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas        95 Jan  9 22:20 pilot_heartbeat.json
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas      1032 Jan  9 22:20 memory_monitor_summary.json
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas    373906 Jan  9 22:20 log.47898826._031016.job.log.tgz.1
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas      7818 Jan  9 22:21 heartbeat.json
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:21 boinc_mmap_file
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas        27 Jan  9 22:21 wrapper_checkpoint.txt
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas       822 Jan  9 22:21 pilotlog.txt
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas    926550 Jan  9 22:21 log.47898826._031016.job.log.1
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas       357 Jan  9 22:21 output.list
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:21 runtime_log
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas   1320960 Jan  9 22:21 result.tar.gz
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas      8817 Jan  9 22:21 runtime_log.err
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas       653 Jan  9 22:21 6uJODmVWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvDlKDm9PetLm.diag
[2026-01-09 22:21:33] -rw-r--r--. 1 boincer umatlas     21318 Jan  9 22:21 stderr.txt
[2026-01-09 22:21:33] HITS file was successfully produced:
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas 226531432 Jan  9 22:20 shared/HITS.pool.root.1
[2026-01-09 22:21:33]  *** Contents of shared directory: ***
[2026-01-09 22:21:33] total 442060
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas 224196862 Jan  9 20:35 ATLAS.root_0
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:35 start_atlas.sh
[2026-01-09 22:21:33] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 20:35 input.tar.gz
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas 226531432 Jan  9 22:20 HITS.pool.root.1
[2026-01-09 22:21:33] -rw-------. 1 boincer umatlas   1320960 Jan  9 22:21 result.tar.gz
22:21:35 (2606705): run_atlas exited; CPU time 53033.351693
22:21:35 (2606705): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN