Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:19:36 (3145987): wrapper (7.7.26015): starting
16:19:36 (3145987): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 16:19:36] Arguments: --nthreads 12
[2026-01-09 16:19:36] Threads: 12
[2026-01-09 16:19:36] Checking for CVMFS
[2026-01-09 16:19:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:19:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:19:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:19:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:19:37] 2.11.5.0 2587603 57262 207888 154962 1 24 24114845 45568001 12328 130560 0 367432850 99.780 237364379 19791 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 16:19:37] CVMFS is ok
[2026-01-09 16:19:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:19:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:19:37] Further information can be found at the LHC@home message board.
[2026-01-09 16:19:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:19:37] Checking for apptainer binary...
[2026-01-09 16:19:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:19:37] Running /usr/bin/apptainer --version
[2026-01-09 16:19:37] apptainer version 1.4.1-1.el9
[2026-01-09 16:19:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:19:37] wns0056.triumf.lcg
[2026-01-09 16:19:37] apptainer works
[2026-01-09 16:19:37] Set ATHENA_PROC_NUMBER=12
[2026-01-09 16:19:37] Set ATHENA_CORE_NUMBER=12
[2026-01-09 16:19:37] Starting ATLAS job with PandaID=6962931365
[2026-01-09 16:19:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:25:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | wrong length of table data, x=[1768004443.0, 1768004504.0], y=[12020.0, 470489.0] (must be same and length>=4)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . Timing measurements:
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . get job = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . initial setup = 4 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload setup = 14 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-in = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload execution = 90 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-out = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . log creation = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931365/pilotlog.txt
[2026-01-09 16:25:01] 2026-01-10 00:24:12,051 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 16:25:01] - Log from pilotlog.txt -
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931365/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | extracted standard info from prmon json
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | wrong length of table data, x=[1768004443.0, 1768004504.0], y=[12020.0, 470489.0] (must be same and length>=4)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . Timing measurements:
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . get job = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . initial setup = 4 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload setup = 14 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-in = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload execution = 90 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-out = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . log creation = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931365/pilotlog.txt
[2026-01-09 16:25:01] 2026-01-10 00:24:12,052 | WARNING  | 
[2026-01-09 16:25:01] [begin log extracts]
[2026-01-09 16:25:01] - Log from pilotlog.txt -
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931365/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | extracted standard info from prmon json
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:25:01] 2026-01-10 00:24:12,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:25:01] 2026-01-10 00:24:12,038 | WARNING  | wrong length of table data, x=[1768004443.0, 1768004504.0], y=[12020.0, 470489.0] (must be same and length>=4)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . Timing measurements:
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . get job = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . initial setup = 4 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload setup = 14 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-in = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . payload execution = 90 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . stage-out = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,039 | INFO     | . log creation = 0 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | ..............................
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 16:25:01] 2026-01-10 00:24:12,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931365/pilotlog.txt
[2026-01-09 16:25:01] [end log extracts]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,052 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,053 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | 
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | job summary report
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | --------------------------------------------------
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | PanDA job id: 6962931365
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | task id: 47961985
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 16:21:56,584 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | pilot state: failed 
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | transexitcode: 65
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | exeerrorcode: 65
[2026-01-09 16:25:01] 2026-01-10 00:24:12,109 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | exitcode: 65
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | cpuconsumptiontime: 40 s
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | nevents: 0
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | neventsw: 0
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | pid: 3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | pgrp: 3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | corecount: 12
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | event service: False
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | sizes: {0: 2283720, 1: 2284573, 9: 2284835, 12: 2284863, 109: 2310295, 110: 2314741, 237: 2314879}
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | --------------------------------------------------
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | 
[2026-01-09 16:25:01] 2026-01-10 00:24:12,110 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | job 6962931365 has completed (purged errors)
[2026-01-09 16:25:01] 2026-01-10 00:24:12,152 | INFO     | overall cleanup function is called
[2026-01-09 16:25:01] 2026-01-10 00:24:13,160 | INFO     | --- collectZombieJob: --- 10, [3156584]
[2026-01-09 16:25:01] 2026-01-10 00:24:13,160 | INFO     | zombie collector waiting for pid 3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:13,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:25:01] 2026-01-10 00:24:13,160 | INFO     | collected zombie processes
[2026-01-09 16:25:01] 2026-01-10 00:24:13,160 | INFO     | will attempt to kill all subprocesses of pid=3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:13,295 | INFO     | process IDs to be killed: [3156584] (in reverse order)
[2026-01-09 16:25:01] 2026-01-10 00:24:13,350 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:25:01] 2026-01-10 00:24:13,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:25:01] 2026-01-10 00:24:13,356 | INFO     | did not find any defunct processes belonging to 3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:13,362 | INFO     | did not find any defunct processes belonging to 3156584
[2026-01-09 16:25:01] 2026-01-10 00:24:13,363 | INFO     | ready for new job
[2026-01-09 16:25:01] 2026-01-10 00:24:13,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:25:01] 2026-01-10 00:24:13,364 | INFO     | ***************************************
[2026-01-09 16:25:01] 2026-01-10 00:24:13,365 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:25:01] 2026-01-10 00:24:13,365 | INFO     | ***************************************
[2026-01-09 16:25:01] 2026-01-10 00:24:13,365 | INFO     | 
[2026-01-09 16:25:01] 2026-01-10 00:24:13,367 | INFO     | architecture information:
[2026-01-09 16:25:01] 2026-01-10 00:24:13,367 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:25:01] 2026-01-10 00:24:13,380 | INFO     | cat /etc/os-release:
[2026-01-09 16:25:01] NAME="CentOS Linux"
[2026-01-09 16:25:01] VERSION="7 (Core)"
[2026-01-09 16:25:01] ID="centos"
[2026-01-09 16:25:01] ID_LIKE="rhel fedora"
[2026-01-09 16:25:01] VERSION_ID="7"
[2026-01-09 16:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:25:01] ANSI_COLOR="0;31"
[2026-01-09 16:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:25:01] HOME_URL="https://www.centos.org/"
[2026-01-09 16:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:25:01] 
[2026-01-09 16:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:25:01] 
[2026-01-09 16:25:01] 2026-01-10 00:24:13,380 | INFO     | ***************************************
[2026-01-09 16:25:01] 2026-01-10 00:24:13,883 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | INFO     | sufficient remaining disk space (1975602118656 B)
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | INFO     | update_server=False
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:25:01] 2026-01-10 00:24:13,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:25:01] 2026-01-10 00:24:13,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:25:01] 2026-01-10 00:24:14,205 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:25:01] 2026-01-10 00:24:14,206 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:25:01] 2026-01-10 00:24:14,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:25:01] 2026-01-10 00:24:14,206 | INFO     | will abort loop
[2026-01-09 16:25:01] 2026-01-10 00:24:14,512 | INFO     | all data control threads have been joined
[2026-01-09 16:25:01] 2026-01-10 00:24:14,907 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:14,915 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,211 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,281 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,308 | INFO     | all payload control threads have been joined
[2026-01-09 16:25:01] 2026-01-10 00:24:15,354 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,410 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,518 | INFO     | [data] control thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,534 | INFO     | [job] validate thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,555 | INFO     | all job control threads have been joined
[2026-01-09 16:25:01] 2026-01-10 00:24:15,570 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,651 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,745 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:15,918 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:16,314 | INFO     | [payload] control thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:16,342 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:16,561 | INFO     | [job] control thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:17,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:25:01] 2026-01-10 00:24:21,101 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:25:01] 2026-01-10 00:24:45,277 | INFO     | PID=3149624 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:25:01] 2026-01-10 00:24:45,277 | INFO     | .. there are 14 such processes running
[2026-01-09 16:25:01] 2026-01-10 00:24:45,277 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:25:01] 2026-01-10 00:24:45,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:25:01] 2026-01-10 00:24:45,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:25:01] 2026-01-10 00:24:55,410 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:25:01] 2026-01-10 00:24:56,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629437626176)>', '<ExcThread(monitor, started 139628866672384)>']
[2026-01-09 16:25:01] 2026-01-10 00:24:56,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:25:01] 2026-01-10 00:24:56,345 | INFO     | [monitor] control thread has ended
[2026-01-09 16:25:01] 2026-01-10 00:25:01,058 | INFO     | all workflow threads have been joined
[2026-01-09 16:25:01] 2026-01-10 00:25:01,059 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:25:01] 2026-01-10 00:25:01,059 | INFO     | traces error code: 0
[2026-01-09 16:25:01] 2026-01-10 00:25:01,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:25:01] 2026-01-10 00:25:01,322 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:25:01] 2026-01-10 00:25:01,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:25:01] 2026-01-10 00:25:01,326 [wrapper] pilotpid: 3149624
[2026-01-09 16:25:01] 2026-01-10 00:25:01,328 [wrapper] Pilot exit status: 0
[2026-01-09 16:25:01] 2026-01-10 00:25:01,338 [wrapper] pandaids: 6962931365
[2026-01-09 16:25:01] 2026-01-10 00:25:01,379 [wrapper] cleanup supervisor_pilot 3149630 3149625
[2026-01-09 16:25:01] 2026-01-10 00:25:01,383 [wrapper] Test setup, not cleaning
[2026-01-09 16:25:01] 2026-01-10 00:25:01,385 [wrapper] apfmon messages muted
[2026-01-09 16:25:01] 2026-01-10 00:25:01,387 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:25:01] 2026-01-10 00:25:01,389 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:25:01]  *** Error codes and diagnostics ***
[2026-01-09 16:25:01]     "exeErrorCode": 65,
[2026-01-09 16:25:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 16:25:01]     "pilotErrorCode": 1305,
[2026-01-09 16:25:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 16:25:01]  *** Listing of results directory ***
[2026-01-09 16:25:01] total 409280
[2026-01-09 16:25:01] -rwx------. 1 boinc boinc     36322 Jan  8 00:17 runpilot2-wrapper.sh
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc      5112 Jan  8 00:23 queuedata.json
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc    579449 Jan  8 00:23 pilot3.tar.gz
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:25:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:19 run_atlas
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:19 job.xml
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc      6594 Jan  9 16:19 init_data.xml
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc 414901083 Jan  9 16:19 EVNT.47961981._000022.pool.root.1
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:19 start_atlas.sh
[2026-01-09 16:25:01] drwxrwx--x. 2 boinc boinc      4096 Jan  9 16:19 shared
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc    592605 Jan  9 16:19 input.tar.gz
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:19 boinc_lockfile
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc      2875 Jan  9 16:19 pandaJob.out
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc    989374 Jan  9 16:19 agis_schedconf.cvmfs.json
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc   1516240 Jan  9 16:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:25:01] drwx------. 5 boinc boinc      4096 Jan  9 16:19 pilot3
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc       525 Jan  9 16:21 boinc_task_state.xml
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc       986 Jan  9 16:22 memory_monitor_summary.json
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc     48028 Jan  9 16:22 log.47961985._000497.job.log.tgz.1
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc        95 Jan  9 16:23 pilot_heartbeat.json
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc     10329 Jan  9 16:24 heartbeat.json
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:25 boinc_mmap_file
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc      5009 Jan  9 16:25 pilotlog.txt
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc        23 Jan  9 16:25 wrapper_checkpoint.txt
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc     96702 Jan  9 16:25 log.47961985._000497.job.log.1
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc       186 Jan  9 16:25 output.list
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:25 runtime_log
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc    163840 Jan  9 16:25 result.tar.gz
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc       647 Jan  9 16:25 vrbNDmbO0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbqeKDmajU9Em.diag
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc      8636 Jan  9 16:25 runtime_log.err
[2026-01-09 16:25:01] -rw-r--r--. 1 boinc boinc     22378 Jan  9 16:25 stderr.txt
[2026-01-09 16:25:01] No HITS result produced
[2026-01-09 16:25:01]  *** Contents of shared directory: ***
[2026-01-09 16:25:01] total 405940
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc 414901083 Jan  9 16:19 ATLAS.root_0
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:19 start_atlas.sh
[2026-01-09 16:25:01] -rw-r--r--. 2 boinc boinc    592605 Jan  9 16:19 input.tar.gz
[2026-01-09 16:25:01] -rw-------. 1 boinc boinc    163840 Jan  9 16:25 result.tar.gz
16:25:03 (3145987): run_atlas exited; CPU time 42.082378
16:25:03 (3145987): called boinc_finish(0)

</stderr_txt>
]]>

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