Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:00:40 (3004418): wrapper (7.7.26015): starting
20:00:40 (3004418): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:00:40] Arguments: --nthreads 8
[2026-01-09 20:00:40] Threads: 8
[2026-01-09 20:00:40] Checking for CVMFS
[2026-01-09 20:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:00:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:00:41] 2.13.3.0 11338 94028 207616 154962 1 269 28984283 32935937 23485 16776704 0 508254031 99.483 707241384 38128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:00:41] CVMFS is ok
[2026-01-09 20:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:00:41] Further information can be found at the LHC@home message board.
[2026-01-09 20:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:00:41] Checking for apptainer binary...
[2026-01-09 20:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:00:41] Running /usr/bin/apptainer --version
[2026-01-09 20:00:41] apptainer version 1.4.5-2.el9
[2026-01-09 20:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:00:42] c7-3-17.aglt2.org
[2026-01-09 20:00:42] apptainer works
[2026-01-09 20:00:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:00:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:00:42] Starting ATLAS job with PandaID=6963193812
[2026-01-09 20:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:02:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:02:13] 2026-01-10 06:01:22,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:02:13] 2026-01-10 06:01:22,546 | INFO     | time since job start (17985s) is within the limit (349056.0s)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,110 [wrapper] supervise_pilot (15 min periods counter: 21)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,551 | INFO     | time since job start (17987s) is within the limit (349056.0s)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,567 | INFO     | monitor loop #1169: job 0:6963193812 is in state 'finished'
[2026-01-10 01:02:13] 2026-01-10 06:01:24,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,591 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 01:02:13] 2026-01-10 06:01:24,596 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3304.849062499998
[2026-01-10 01:02:13] 2026-01-10 06:01:24,607 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963193812/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,608 | INFO     | extracted standard info from prmon json
[2026-01-10 01:02:13] 2026-01-10 06:01:24,608 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:02:13] 2026-01-10 06:01:24,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:02:13] 2026-01-10 06:01:24,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:02:13] 2026-01-10 06:01:24,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:02:13] 2026-01-10 06:01:24,612 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:02:13] 2026-01-10 06:01:24,612 | INFO     | sum of square deviations: 7799695718.232058
[2026-01-10 01:02:13] 2026-01-10 06:01:24,614 | INFO     | sum of deviations: 88203314410.47102
[2026-01-10 01:02:13] 2026-01-10 06:01:24,614 | INFO     | mean x: 1768015940.0511944
[2026-01-10 01:02:13] 2026-01-10 06:01:24,614 | INFO     | mean y: 2486993.368600683
[2026-01-10 01:02:13] 2026-01-10 06:01:24,614 | INFO     | intersect: -19991224489.31572
[2026-01-10 01:02:13] 2026-01-10 06:01:24,614 | INFO     | chi2: 2.793844049823049
[2026-01-10 01:02:13] 2026-01-10 06:01:24,615 | INFO     | sum of square deviations: 7407172003.218723
[2026-01-10 01:02:13] 2026-01-10 06:01:24,616 | INFO     | sum of deviations: 85321573963.79173
[2026-01-10 01:02:13] 2026-01-10 06:01:24,616 | INFO     | mean x: 1768015787.5520833
[2026-01-10 01:02:13] 2026-01-10 06:01:24,616 | INFO     | mean y: 2485873.6805555555
[2026-01-10 01:02:13] 2026-01-10 06:01:24,616 | INFO     | intersect: -20362896450.53522
[2026-01-10 01:02:13] 2026-01-10 06:01:24,617 | INFO     | chi2: 2.795360189775842
[2026-01-10 01:02:13] 2026-01-10 06:01:24,617 | INFO     | current chi2=2.795360189775842 (change=-0.054267164729164236 %)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,617 | INFO     | right removable region: 287
[2026-01-10 01:02:13] 2026-01-10 06:01:24,617 | INFO     | sum of square deviations: 7407162853.218723
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | sum of deviations: 13057370853.437527
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | mean x: 1768016092.5520833
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | mean y: 2516082.4375
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | intersect: -3114148456.032367
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | chi2: 0.08446728621872068
[2026-01-10 01:02:13] 2026-01-10 06:01:24,619 | INFO     | current chi2=0.08446728621872068 (change=96.97666424065184 %)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,620 | INFO     | sum of square deviations: 7028025588.204968
[2026-01-10 01:02:13] 2026-01-10 06:01:24,621 | INFO     | sum of deviations: 11129669796.148409
[2026-01-10 01:02:13] 2026-01-10 06:01:24,621 | INFO     | mean x: 1768016245.0530035
[2026-01-10 01:02:13] 2026-01-10 06:01:24,621 | INFO     | mean y: 2516841.590106007
[2026-01-10 01:02:13] 2026-01-10 06:01:24,622 | INFO     | intersect: -2797335941.343765
[2026-01-10 01:02:13] 2026-01-10 06:01:24,622 | INFO     | chi2: 0.07258306404759385
[2026-01-10 01:02:13] 2026-01-10 06:01:24,622 | INFO     | current chi2=0.07258306404759385 (change=14.069615235836602 %)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,622 | INFO     | left removable region: 20
[2026-01-10 01:02:13] 2026-01-10 06:01:24,622 | INFO     | sum of square deviations: 5902106864.157301
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | sum of deviations: 3519666370.640451
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | mean x: 1768016367.0561798
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | mean y: 2518681.8239700375
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | intersect: -1051821385.730539
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | chi2: 0.023463363391114236
[2026-01-10 01:02:13] 2026-01-10 06:01:24,624 | INFO     | current memory leak: 0.60 B/s (using 267 data points, chi2=0.02)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | could have reported an average CPU frequency of 3200 MHz (13 samples)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | ..............................
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . Timing measurements:
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . get job = 0 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . initial setup = 8 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . payload setup = 44 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . stage-in = 0 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . payload execution = 17870 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . stage-out = 1 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,625 | INFO     | . log creation = 0 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,627 | INFO     | ..............................
[2026-01-10 01:02:13] 2026-01-10 06:01:24,703 | INFO     | 
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | job summary report
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | --------------------------------------------------
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | PanDA job id: 6963193812
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | task id: 47898826
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | errors: (none)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | pilot state: finished 
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | transexitcode: 0
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | exeerrorcode: 0
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | exeerrordiag: 
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | exitcode: 0
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | exitmsg: OK
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | cpuconsumptiontime: 44789 s
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | nevents: 400
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | neventsw: 0
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | pid: 3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | pgrp: 3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | corecount: 8
[2026-01-10 01:02:13] 2026-01-10 06:01:24,704 | INFO     | event service: False
[2026-01-10 01:02:13] 2026-01-10 06:01:24,705 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2283999, 3: 2284055, 14: 2284055, 25: 2284083, 34: 2284501, 36: 2284529, 17919: 2316883, 17921: 2325937, 17925: 2326075}
[2026-01-10 01:02:13] 2026-01-10 06:01:24,705 | INFO     | --------------------------------------------------
[2026-01-10 01:02:13] 2026-01-10 06:01:24,705 | INFO     | 
[2026-01-10 01:02:13] 2026-01-10 06:01:24,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | job 6963193812 has completed (purged errors)
[2026-01-10 01:02:13] 2026-01-10 06:01:24,723 | INFO     | overall cleanup function is called
[2026-01-10 01:02:13] 2026-01-10 06:01:25,730 | INFO     | --- collectZombieJob: --- 10, [3018144]
[2026-01-10 01:02:13] 2026-01-10 06:01:25,731 | INFO     | zombie collector waiting for pid 3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:25,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:02:13] 2026-01-10 06:01:25,731 | INFO     | collected zombie processes
[2026-01-10 01:02:13] 2026-01-10 06:01:25,731 | INFO     | will attempt to kill all subprocesses of pid=3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:26,063 | INFO     | process IDs to be killed: [3018144] (in reverse order)
[2026-01-10 01:02:13] 2026-01-10 06:01:26,168 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:02:13] 2026-01-10 06:01:26,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:02:13] 2026-01-10 06:01:26,179 | INFO     | did not find any defunct processes belonging to 3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:26,194 | INFO     | did not find any defunct processes belonging to 3018144
[2026-01-10 01:02:13] 2026-01-10 06:01:26,194 | INFO     | ready for new job
[2026-01-10 01:02:13] 2026-01-10 06:01:26,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:02:13] 2026-01-10 06:01:26,196 | INFO     | ***************************************
[2026-01-10 01:02:13] 2026-01-10 06:01:26,196 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:02:13] 2026-01-10 06:01:26,197 | INFO     | ***************************************
[2026-01-10 01:02:13] 2026-01-10 06:01:26,197 | INFO     | 
[2026-01-10 01:02:13] 2026-01-10 06:01:26,201 | INFO     | architecture information:
[2026-01-10 01:02:13] 2026-01-10 06:01:26,201 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:02:13] 2026-01-10 06:01:26,212 | INFO     | cat /etc/os-release:
[2026-01-10 01:02:13] NAME="CentOS Linux"
[2026-01-10 01:02:13] VERSION="7 (Core)"
[2026-01-10 01:02:13] ID="centos"
[2026-01-10 01:02:13] ID_LIKE="rhel fedora"
[2026-01-10 01:02:13] VERSION_ID="7"
[2026-01-10 01:02:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:02:13] ANSI_COLOR="0;31"
[2026-01-10 01:02:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:02:13] HOME_URL="https://www.centos.org/"
[2026-01-10 01:02:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:02:13] 
[2026-01-10 01:02:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:02:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:02:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:02:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:02:13] 
[2026-01-10 01:02:13] 2026-01-10 06:01:26,212 | INFO     | ***************************************
[2026-01-10 01:02:13] 2026-01-10 06:01:26,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 01:02:13] 2026-01-10 06:01:26,731 | INFO     | sufficient remaining disk space (75153539072 B)
[2026-01-10 01:02:13] 2026-01-10 06:01:26,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:02:13] 2026-01-10 06:01:26,732 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:02:13] 2026-01-10 06:01:26,732 | INFO     | update_server=False
[2026-01-10 01:02:13] 2026-01-10 06:01:26,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:02:13] 2026-01-10 06:01:26,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:02:13] 2026-01-10 06:01:27,068 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 01:02:13] 2026-01-10 06:01:27,068 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 01:02:13] 2026-01-10 06:01:27,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:02:13] 2026-01-10 06:01:27,069 | INFO     | will abort loop
[2026-01-10 01:02:13] 2026-01-10 06:01:27,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:02:13] 2026-01-10 06:01:27,378 | INFO     | all payload control threads have been joined
[2026-01-10 01:02:13] 2026-01-10 06:01:27,708 | INFO     | all data control threads have been joined
[2026-01-10 01:02:13] 2026-01-10 06:01:27,737 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,021 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,048 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,073 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,172 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,383 | INFO     | [payload] control thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,391 | INFO     | [job] validate thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,404 | INFO     | all job control threads have been joined
[2026-01-10 01:02:13] 2026-01-10 06:01:28,472 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,713 | INFO     | [data] control thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:28,737 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:29,095 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:29,098 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:29,408 | INFO     | [job] control thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:29,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:02:13] 2026-01-10 06:01:30,706 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:31,270 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:36,942 | INFO     | job.realtimelogging is not enabled
[2026-01-10 01:02:13] 2026-01-10 06:01:37,943 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:02:13] 2026-01-10 06:01:58,036 | INFO     | PID=3008385 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 01:02:13] 2026-01-10 06:01:58,036 | INFO     | .. there are 19 such processes running
[2026-01-10 01:02:13] 2026-01-10 06:01:58,036 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:02:13] 2026-01-10 06:01:58,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:02:13] 2026-01-10 06:01:58,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:02:13] 2026-01-10 06:02:07,353 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:02:13] 2026-01-10 06:02:08,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944699967296)>', '<ExcThread(monitor, started 139943993145088)>']
[2026-01-10 01:02:13] 2026-01-10 06:02:09,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:02:13] 2026-01-10 06:02:09,086 | INFO     | [monitor] control thread has ended
[2026-01-10 01:02:13] 2026-01-10 06:02:13,522 | INFO     | all workflow threads have been joined
[2026-01-10 01:02:13] 2026-01-10 06:02:13,523 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:02:13] 2026-01-10 06:02:13,523 | INFO     | traces error code: 0
[2026-01-10 01:02:13] 2026-01-10 06:02:13,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:02:13] 2026-01-10 06:02:13,618 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:02:13] 2026-01-10 06:02:13,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:02:13] 2026-01-10 06:02:13,623 [wrapper] pilotpid: 3008385
[2026-01-10 01:02:13] 2026-01-10 06:02:13,625 [wrapper] Pilot exit status: 0
[2026-01-10 01:02:13] 2026-01-10 06:02:13,636 [wrapper] pandaids: 6963193812
[2026-01-10 01:02:13] 2026-01-10 06:02:13,731 [wrapper] cleanup supervisor_pilot 4055496 3008386
[2026-01-10 01:02:13] 2026-01-10 06:02:13,735 [wrapper] Test setup, not cleaning
[2026-01-10 01:02:13] 2026-01-10 06:02:13,738 [wrapper] apfmon messages muted
[2026-01-10 01:02:13] 2026-01-10 06:02:13,741 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:02:13] 2026-01-10 06:02:13,744 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:02:13]  *** Error codes and diagnostics ***
[2026-01-10 01:02:13]     "exeErrorCode": 0,
[2026-01-10 01:02:13]     "exeErrorDiag": "",
[2026-01-10 01:02:13]     "pilotErrorCode": 0,
[2026-01-10 01:02:13]     "pilotErrorDiag": "",
[2026-01-10 01:02:13]  *** Listing of results directory ***
[2026-01-10 01:02:13] total 441140
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 01:02:13] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:02:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:00 run_atlas
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:00 job.xml
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas 224093555 Jan  9 20:00 EVNT.47898824._001510.pool.root.1
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:00 start_atlas.sh
[2026-01-10 01:02:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:00 shared
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 20:00 input.tar.gz
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:00 boinc_lockfile
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 20:00 pandaJob.out
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas        57 Jan  9 20:00 setup.sh.local
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas    989374 Jan  9 20:01 agis_schedconf.cvmfs.json
[2026-01-10 01:02:13] drwx------. 5 boincer umatlas      4096 Jan  9 20:01 pilot3
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 00:57 init_data.xml
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas       531 Jan 10 01:00 boinc_task_state.xml
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas 217997473 Jan 10 01:00 HITS.47898826._039285.pool.root.1
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas        95 Jan 10 01:01 pilot_heartbeat.json
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas      1035 Jan 10 01:01 memory_monitor_summary.json
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas   1516240 Jan 10 01:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas    502151 Jan 10 01:01 log.47898826._039285.job.log.tgz.1
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas      7778 Jan 10 01:01 heartbeat.json
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas        28 Jan 10 01:02 wrapper_checkpoint.txt
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas      5082 Jan 10 01:02 pilotlog.txt
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 01:02 boinc_mmap_file
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas   2352941 Jan 10 01:02 log.47898826._039285.job.log.1
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas       357 Jan 10 01:02 output.list
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas       620 Jan 10 01:02 runtime_log
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas   2877440 Jan 10 01:02 result.tar.gz
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 01:02 runtime_log.err
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas       654 Jan 10 01:02 qMwKDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaChKDmhnmpZm.diag
[2026-01-10 01:02:13] -rw-r--r--. 1 boincer umatlas     21377 Jan 10 01:02 stderr.txt
[2026-01-10 01:02:13] HITS file was successfully produced:
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas 217997473 Jan 10 01:00 shared/HITS.pool.root.1
[2026-01-10 01:02:13]  *** Contents of shared directory: ***
[2026-01-10 01:02:13] total 435152
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas 224093555 Jan  9 20:00 ATLAS.root_0
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:00 start_atlas.sh
[2026-01-10 01:02:13] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 20:00 input.tar.gz
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas 217997473 Jan 10 01:00 HITS.pool.root.1
[2026-01-10 01:02:13] -rw-------. 1 boincer umatlas   2877440 Jan 10 01:02 result.tar.gz
01:02:15 (3004418): run_atlas exited; CPU time 45535.874189
01:02:15 (3004418): called boinc_finish(0)

</stderr_txt>
]]>

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