Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:07 (2760213): wrapper (7.7.26015): starting
11:38:07 (2760213): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 11:38:07] Arguments: --nthreads 6
[2026-01-10 11:38:07] Threads: 6
[2026-01-10 11:38:07] Checking for CVMFS
[2026-01-10 11:38:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 11:38:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 11:38:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 11:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 11:38:08] 2.13.3.0 2288015 1255 71408 154964 0 81 12110510 20971520 929 130560 0 1488959 99.992 48023 16 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 11:38:08] CVMFS is ok
[2026-01-10 11:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 11:38:08] Checking for apptainer binary...
[2026-01-10 11:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 11:38:08] Running /usr/bin/apptainer --version
[2026-01-10 11:38:08] apptainer version 1.4.4-1.el9
[2026-01-10 11:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 11:38:08] testio006
[2026-01-10 11:38:08] apptainer works
[2026-01-10 11:38:08] Set ATHENA_PROC_NUMBER=6
[2026-01-10 11:38:08] Set ATHENA_CORE_NUMBER=6
[2026-01-10 11:38:08] Starting ATLAS job with PandaID=6962318775
[2026-01-10 11:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:45:58]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:45:58] 2026-01-10 04:45:22,035 | INFO     | total number of processed events: 400 (read)
[2026-01-10 13:45:58] 2026-01-10 04:45:22,036 | INFO     | executing command: lscpu
[2026-01-10 13:45:58] 2026-01-10 04:45:22,059 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 13:45:58] 2026-01-10 04:45:23,376 | INFO     | time since job start (7606s) is within the limit (174528.0s)
[2026-01-10 13:45:58] 2026-01-10 04:45:24,698 | WARNING  | process 2770680 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 13:45:58] 2026-01-10 04:45:24,698 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6962318775/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:45:58] 2026-01-10 04:45:24,775 | INFO     | number of running child processes to parent process 2770680: 1
[2026-01-10 13:45:58] 2026-01-10 04:45:24,776 | INFO     | maximum number of monitored processes: 6
[2026-01-10 13:45:58] 2026-01-10 04:45:25,381 | INFO     | time since job start (7608s) is within the limit (174528.0s)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,520 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 13:45:58] 2026-01-10 04:45:26,523 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3960.7664999999997
[2026-01-10 13:45:58] 2026-01-10 04:45:26,526 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6962318775/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,526 | INFO     | extracted standard info from prmon json
[2026-01-10 13:45:58] 2026-01-10 04:45:26,526 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:45:58] 2026-01-10 04:45:26,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:45:58] 2026-01-10 04:45:26,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:45:58] 2026-01-10 04:45:26,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:45:58] 2026-01-10 04:45:26,529 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:45:58] 2026-01-10 04:45:26,529 | INFO     | sum of square deviations: 605580565.8720003
[2026-01-10 13:45:58] 2026-01-10 04:45:26,530 | INFO     | sum of deviations: -4517690934.431985
[2026-01-10 13:45:58] 2026-01-10 04:45:26,530 | INFO     | mean x: 1768016525.032
[2026-01-10 13:45:58] 2026-01-10 04:45:26,530 | INFO     | mean y: 2468397.608
[2026-01-10 13:45:58] 2026-01-10 04:45:26,530 | INFO     | intersect: 13192046592.80931
[2026-01-10 13:45:58] 2026-01-10 04:45:26,530 | INFO     | chi2: 2.918000878749278
[2026-01-10 13:45:58] 2026-01-10 04:45:26,531 | INFO     | sum of square deviations: 535775825.86666626
[2026-01-10 13:45:58] 2026-01-10 04:45:26,531 | INFO     | sum of deviations: 3208165565.7999988
[2026-01-10 13:45:58] 2026-01-10 04:45:26,531 | INFO     | mean x: 1768016372.5333333
[2026-01-10 13:45:58] 2026-01-10 04:45:26,531 | INFO     | mean y: 2484741.8
[2026-01-10 13:45:58] 2026-01-10 04:45:26,531 | INFO     | intersect: -10584199039.531384
[2026-01-10 13:45:58] 2026-01-10 04:45:26,532 | INFO     | chi2: 2.276737945703099
[2026-01-10 13:45:58] 2026-01-10 04:45:26,532 | INFO     | current chi2=2.276737945703099 (change=21.976104863993008 %)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,532 | INFO     | right removable region: 119
[2026-01-10 13:45:58] 2026-01-10 04:45:26,532 | INFO     | sum of square deviations: 535773385.86666626
[2026-01-10 13:45:58] 2026-01-10 04:45:26,532 | INFO     | sum of deviations: -29867108654.600006
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | mean x: 1768016677.5333333
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | mean y: 2523273.525
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | intersect: 98562003090.93845
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | chi2: 0.923202105663427
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | current chi2=0.923202105663427 (change=68.36182907322727 %)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,533 | INFO     | sum of square deviations: 471547705.8608696
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | sum of deviations: -28088574368.26087
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | mean x: 1768016830.0347826
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | mean y: 2518892.565217391
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | intersect: 105317573122.56366
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | chi2: 0.9027110873544089
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | current chi2=0.9027110873544089 (change=2.2195593124533617 %)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | left removable region: 20
[2026-01-10 13:45:58] 2026-01-10 04:45:26,534 | INFO     | sum of square deviations: 300827249.8383835
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | sum of deviations: -9567682702.66667
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | mean x: 1768016952.040404
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | mean y: 2508265.6666666665
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | intersect: 56233535272.51622
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | chi2: 0.15755047534695002
[2026-01-10 13:45:58] 2026-01-10 04:45:26,535 | INFO     | current memory leak: -31.80 B/s (using 99 data points, chi2=0.16)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | could have reported an average CPU frequency of 3927 MHz (8 samples)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | ..............................
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . Timing measurements:
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . get job = 0 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . initial setup = 22 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . payload setup = 5 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . stage-in = 0 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . payload execution = 7575 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . stage-out = 0 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | . log creation = 0 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,536 | INFO     | ..............................
[2026-01-10 13:45:58] 2026-01-10 04:45:26,764 | INFO     | 
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | job summary report
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | --------------------------------------------------
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | PanDA job id: 6962318775
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | task id: 47898826
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | errors: (none)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | pilot state: finished 
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | transexitcode: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | exeerrorcode: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | exeerrordiag: 
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | exitcode: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:26,765 | INFO     | exitmsg: OK
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | cpuconsumptiontime: 41927 s
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | nevents: 400
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | neventsw: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | pid: 2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | pgrp: 2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | corecount: 6
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | event service: False
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 7585: 2311782, 7587: 2320780, 7588: 2320836, 7594: 2321158}
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | --------------------------------------------------
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | 
[2026-01-10 13:45:58] 2026-01-10 04:45:26,766 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-10 13:45:58] 2026-01-10 04:45:26,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,783 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,783 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,783 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,785 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,785 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:45:58] 2026-01-10 04:45:26,785 | INFO     | job 6962318775 has completed (purged errors)
[2026-01-10 13:45:58] 2026-01-10 04:45:26,785 | INFO     | overall cleanup function is called
[2026-01-10 13:45:58] 2026-01-10 04:45:27,792 | INFO     | --- collectZombieJob: --- 10, [2770680]
[2026-01-10 13:45:58] 2026-01-10 04:45:27,792 | INFO     | zombie collector waiting for pid 2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:27,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:45:58] 2026-01-10 04:45:27,792 | INFO     | collected zombie processes
[2026-01-10 13:45:58] 2026-01-10 04:45:27,792 | INFO     | will attempt to kill all subprocesses of pid=2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:27,886 | INFO     | process IDs to be killed: [2770680] (in reverse order)
[2026-01-10 13:45:58] 2026-01-10 04:45:27,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:45:58] 2026-01-10 04:45:27,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:45:58] 2026-01-10 04:45:27,929 | INFO     | did not find any defunct processes belonging to 2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:27,932 | INFO     | did not find any defunct processes belonging to 2770680
[2026-01-10 13:45:58] 2026-01-10 04:45:27,932 | INFO     | ready for new job
[2026-01-10 13:45:58] 2026-01-10 04:45:27,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:45:58] 2026-01-10 04:45:27,934 | INFO     | ***************************************
[2026-01-10 13:45:58] 2026-01-10 04:45:27,934 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:45:58] 2026-01-10 04:45:27,934 | INFO     | ***************************************
[2026-01-10 13:45:58] 2026-01-10 04:45:27,934 | INFO     | 
[2026-01-10 13:45:58] 2026-01-10 04:45:27,935 | INFO     | architecture information:
[2026-01-10 13:45:58] 2026-01-10 04:45:27,935 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:45:58] 2026-01-10 04:45:27,947 | INFO     | cat /etc/os-release:
[2026-01-10 13:45:58] NAME="CentOS Linux"
[2026-01-10 13:45:58] VERSION="7 (Core)"
[2026-01-10 13:45:58] ID="centos"
[2026-01-10 13:45:58] ID_LIKE="rhel fedora"
[2026-01-10 13:45:58] VERSION_ID="7"
[2026-01-10 13:45:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:45:58] ANSI_COLOR="0;31"
[2026-01-10 13:45:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:45:58] HOME_URL="https://www.centos.org/"
[2026-01-10 13:45:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:45:58] 
[2026-01-10 13:45:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:45:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:45:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:45:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:45:58] 
[2026-01-10 13:45:58] 2026-01-10 04:45:27,947 | INFO     | ***************************************
[2026-01-10 13:45:58] 2026-01-10 04:45:28,450 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-10 13:45:58] 2026-01-10 04:45:28,467 | INFO     | sufficient remaining disk space (92577726464 B)
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | INFO     | update_server=False
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:45:58] 2026-01-10 04:45:28,468 | INFO     | aborting loop
[2026-01-10 13:45:58] 2026-01-10 04:45:29,279 | INFO     | all payload control threads have been joined
[2026-01-10 13:45:58] 2026-01-10 04:45:29,469 | INFO     | all data control threads have been joined
[2026-01-10 13:45:58] 2026-01-10 04:45:29,473 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,473 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,473 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,510 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,543 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,556 | INFO     | [job] validate thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:29,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:45:58] 2026-01-10 04:45:29,989 | INFO     | all job control threads have been joined
[2026-01-10 13:45:58] 2026-01-10 04:45:30,091 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,113 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,120 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,284 | INFO     | [payload] control thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,285 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,336 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,474 | INFO     | [data] control thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:30,994 | INFO     | [job] control thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:31,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:45:58] 2026-01-10 04:45:31,683 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:35,066 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:45:58] 2026-01-10 04:45:49,393 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:45:58] 2026-01-10 04:45:50,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662228354880)>', '<ExcThread(monitor, started 140661772769024)>']
[2026-01-10 13:45:58] 2026-01-10 04:45:55,366 | INFO     | all workflow threads have been joined
[2026-01-10 13:45:58] 2026-01-10 04:45:55,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:45:58] 2026-01-10 04:45:55,366 | INFO     | traces error code: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:55,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:45:58] 2026-01-10 04:45:58,557 | INFO     | PID=2763981 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:45:58] 2026-01-10 04:45:58,557 | INFO     | .. there are 2 such processes running
[2026-01-10 13:45:58] 2026-01-10 04:45:58,558 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:45:58] 2026-01-10 04:45:58,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:45:58] 2026-01-10 04:45:58,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:45:58] 2026-01-10 04:45:58,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:45:58] 2026-01-10 04:45:58,558 | INFO     | [monitor] control thread has ended
[2026-01-10 13:45:58] 2026-01-10 04:45:58,654 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:45:58] 2026-01-10 04:45:58,657 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:45:58] 2026-01-10 04:45:58,659 [wrapper] pilotpid: 2763981
[2026-01-10 13:45:58] 2026-01-10 04:45:58,661 [wrapper] Pilot exit status: 0
[2026-01-10 13:45:58] 2026-01-10 04:45:58,670 [wrapper] pandaids: 6962318775
[2026-01-10 13:45:58] 2026-01-10 04:45:58,696 [wrapper] cleanup supervisor_pilot 2813208 2763982
[2026-01-10 13:45:58] 2026-01-10 04:45:58,698 [wrapper] Test setup, not cleaning
[2026-01-10 13:45:58] 2026-01-10 04:45:58,700 [wrapper] apfmon messages muted
[2026-01-10 13:45:58] 2026-01-10 04:45:58,702 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:45:58] 2026-01-10 04:45:58,704 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:45:58]  *** Error codes and diagnostics ***
[2026-01-10 13:45:58]     "exeErrorCode": 0,
[2026-01-10 13:45:58]     "exeErrorDiag": "",
[2026-01-10 13:45:58]     "pilotErrorCode": 0,
[2026-01-10 13:45:58]     "pilotErrorDiag": "",
[2026-01-10 13:45:58]  *** Listing of results directory ***
[2026-01-10 13:45:58] total 440316
[2026-01-10 13:45:58] -rwx------. 1 boinc boinc     36322 Jan  8 05:59 runpilot2-wrapper.sh
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 06:00 pilot3.tar.gz
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 06:02 queuedata.json
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc       100 Jan 10 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:45:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 11:38 run_atlas
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc       105 Jan 10 11:38 job.xml
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc 226641822 Jan 10 11:38 EVNT.47898824._000562.pool.root.1
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc     15847 Jan 10 11:38 start_atlas.sh
[2026-01-10 13:45:58] drwxrwx--x. 2 boinc boinc        68 Jan 10 11:38 shared
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc    592398 Jan 10 11:38 input.tar.gz
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc      9356 Jan 10 11:38 init_data.xml
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc         0 Jan 10 11:38 boinc_lockfile
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc      2519 Jan 10 11:38 pandaJob.out
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc    989382 Jan 10 11:38 agis_schedconf.cvmfs.json
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc   1516240 Jan 10 11:38 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:45:58] drwx------. 5 boinc boinc      4096 Jan 10 11:38 pilot3
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc 217486230 Jan 10 13:44 HITS.47898826._013104.pool.root.1
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc       529 Jan 10 13:45 boinc_task_state.xml
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc      1020 Jan 10 13:45 memory_monitor_summary.json
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc    340261 Jan 10 13:45 log.47898826._013104.job.log.tgz.1
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc      7757 Jan 10 13:45 heartbeat.json
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc      8192 Jan 10 13:45 boinc_mmap_file
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc        27 Jan 10 13:45 wrapper_checkpoint.txt
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc       822 Jan 10 13:45 pilotlog.txt
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc        95 Jan 10 13:45 pilot_heartbeat.json
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc   1089100 Jan 10 13:45 log.47898826._013104.job.log.1
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc       357 Jan 10 13:45 output.list
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc       620 Jan 10 13:45 runtime_log
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc   1443840 Jan 10 13:45 result.tar.gz
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc      8775 Jan 10 13:45 runtime_log.err
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc       644 Jan 10 13:45 gsGODmgnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9oiKDm1DilHm.diag
[2026-01-10 13:45:58] -rw-r--r--. 1 boinc boinc     21078 Jan 10 13:45 stderr.txt
[2026-01-10 13:45:58] HITS file was successfully produced:
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc 217486230 Jan 10 13:44 shared/HITS.pool.root.1
[2026-01-10 13:45:58]  *** Contents of shared directory: ***
[2026-01-10 13:45:58] total 435732
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc 226641822 Jan 10 11:38 ATLAS.root_0
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc     15847 Jan 10 11:38 start_atlas.sh
[2026-01-10 13:45:58] -rw-r--r--. 2 boinc boinc    592398 Jan 10 11:38 input.tar.gz
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc 217486230 Jan 10 13:44 HITS.pool.root.1
[2026-01-10 13:45:58] -rw-------. 1 boinc boinc   1443840 Jan 10 13:45 result.tar.gz
13:46:00 (2760213): run_atlas exited; CPU time 41993.988955
13:46:00 (2760213): called boinc_finish(0)

</stderr_txt>
]]>

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